Basic Information

Gene Symbol
ncor1_1
Assembly
GCA_900480035.1
Location
UELX01001182.1:5668-44521[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 2.9e-08 4e-05 24.2 0.0 3 43 597 637 596 640 0.96
2 2 1e-15 1.5e-12 48.0 0.7 3 46 1067 1110 1065 1110 0.97

Sequence Information

Coding Sequence
ATGAACAGTGGCCCGGCTGGCGGCCCTGGCCAGCCACCGCAGGGACTACAAGCCTCGTCCTCCGCCTCCTCAGCACGTGACCAGCACTCGCAACAAGGTACCGATCTAAGCGGCCTCAACATCACGATAATGAACATCACGGTGCCGCCGGTGGTGCCGGTGCCTGCAGGCCTGCGCTTTGTCCATCCTTACCTGCCCCCACCGCCGCCTCATCCGCACCCGCCTCCACAGTCTGTCGCCTCGGTGGCCCAAGTCGCCCAGGTCGCTTCGTCCAATTCGGCCTCGCCCGTCTCGGCCTCCTCGGGCCCTACGTCCATCGTTCAACAGCAAGTCAGCAGGCAGCAGCACCCGCCCTCGGCGCCTTCGCCCGCGTCCAGCGCCGCAGCCGCCTATACGAGGGACGTTTATCGCAACGCAAGTCCTAATGTGAACGAGCGAGTGGCGATAAGCGTAAGCAGTAGTCCAGTGTCCTCGCAGGTGGTCGGGGTTGGTAGCGACTACGTGGTGAGCAGTCGAGGTGGCGACCGACCGCGCATTTCCCTCTTGCCGGCGCCAGCTTCGATAGCTCCGGCAGCCTCGCCGACCGCACCCACAGACTATCATGCAGCGGCAGCCGCCGCGCGCAACAGTCGTAGCGGTCCCACCGTGGCCCCGGCTGGTATCCTGGCCATGCAGCCGCAGGACTACCGCCCTAGTCCCGTTGACATGGCGCAGCttcagcaacaacagcagcagcaggatgCACCACCTTTCAAAAAGATCCGCCTCGGCGCGCCTGCCCAGCAACTGCCACCAActcaacagcagcaacagcagtcgATCTCACAAACAGAGTGCCACCAGAGGCTCAGTAGCCAACAAGATGCGCTGATCAAGCAAAAGCAACCAGTACAGCAGCTGCAGCCACTCAGGATAGATACGAGGACGACGGGTGCATATACGCCACAGACGGAAGCAATTTCGCCGACTCTTCCTGAGCCTAATACGCAAGAGGACGCGGCATTTAGGAGCACCAAAGATGATCTTCTTCAGCAAATAGCCAAGGTCGACCGAGAAATCGCGAAAAGGGAAACGCAAATTAGCAAGCTTCGGAAAAAACTTAAAGAGTTGGAAGAAGTAGCTAAACAACCCTTATTAGAACCCGGTAATAAACGACCTGTGGAAGAAACATCTCTGCAACCTAAGCATCAGTCacttgtacaaaaaatttatgctgAGAATaggaaaaaatcagaGGAGGCGCACAGGTTGCTGGACAAGTTAGGGCCGAAGGTGAAACTGCCACTGTATAACCAACCTTCGGATACGAGCGTGTATCAAGAAAATCGTACGAGGCACCAATGCATGAAATCGCGCCTTGTGGCAAGACTTCGCAAGGAACACGCGGAGCGTGCTTCCCTCCACCGCCAGCAATCACAGACTTACGCGATACTCGTACAGGAGTGGCATCGTAAGGTCGAAAAGCTGGAGGCGACACAGAAACGTAAAACGAAGGAGGCAAAGAATCGCGAGTTCTTTGAGAAAGTCTTCCCAGAGCTTCGGAAGCAGCGAGAAGACAAGGAGCGCTTTAACAGGGTTGGTGCCCGTATCAAGAGCGAGGCCGACCTGGAAGAAATTATGGATGGTCTGCAAGAGCAGGAGATGGAGGATAAAAAGATGCGCTCGTACGCTGTGATCCCGCCGCTGCTGCTTGATGCAAAACAGCGGAAAATCGCATTTCAGAATCGTAATGGACTACTGCAACCAGAGGAGCTCGAGGCGCTGCACAGTGAAAGGAAGCTGATCAACGTCTGGAGCCAGACGGAGCACGAAGTGTTCAAGGAAAAATATCTTCAGCATCCCAAGAACTTCGGAGCGATAGCCCAGTCGTTCGAGCACAAGTCTGTAGCGGACTGCGTGCATCACTACTACCTCACTAAGAAAGCGGAAAATTATAAGCAGCTACTCCGAAAGTCGAGGCGTACGCGTAGTTCTCGAAACAATCCTAATAATAAGGTAAATAATAGTAACTCCACTATCGGACCTATAGATATATTAACGACGGGAGTAACGACGAGGCTGCAGCGTGAGCAGCAACAAAAAACCCAAGAGAACCCTCAAAGTAGTTCAGCGGCGTCGAGTAGCGGCGCCAACGCGCCTACGACGTCGACCACGTCTACGACCGCGTCATCGTCCTCGTCGACGGCGGTGGCGAGCAGCTCCGTGGGTACGACGCCAGCAGGCGCAGCGAGCTCGTCCGGTGGCGCCAGCGCCGCTGGAGCGAATTCAACCTCGGAGCcctcgacgacgacggcgacgacgacgataACATCGTCGGCGTCGGTAACGGCGTCAGCATCCGTCCCGAGTATCAGCGCGACGACAACGACGTCGAGCGTACTCACGACGACGTCAACGTCGTCAGCCAGCTCCAAGGACGCCCGCGAGGCGAACAAAGAAAGTAAGGAGATCAAGCAGGAGCCCAAAGACTCGATACTTAAAGATATCAAAGAAGAGTCGCAATCAAGCTCTGAAACACTCTCCAGTAGAGAAATCAAGGTCGAGAACAAGGGAGCTCTGTCCTCGTCGTCCAACACAAGCGCGACGAACACCACCGCGCAGAGCAGCAGCCTCCAGCTagaacagcagcagcaaaaagataagaaaaaggGCGCAGGAATCACGGGCGGCTCCAGTGCCACCAGCAGGTCGAAGGACAAGAAGAAGGAGAACCATGCGACGCCTATGGAAACTAGCGACGAGGAAGCGCAAGAATGCAGCGGCAGACAGCTCGGGCCTCACCCCTGCTCGATCTGCCAGCAGACCGTGGAGGCGGGCAACCAGAGCCGTCCGCTATCCCGCAGCCAGGCCTCGCAGTACGGTCTGCGCGAGGATCAGGTGCCTCTGGGTGCCCGGGTCTGCAACACATGTCGGTGCAAGTCCGTGCGTGGCCGCTACACCACCTGTCCGCTGCCTGGCTGTCCCAATCTCAGCAGTGCCAGCTCCAAGCAGCGGGTCAAACGGTTGCGCGCCCTGCCGCCCAAATGGAACGACCTGCCGCCCGAGATTCGCGATCCCATCGTTCAGGAATTCCAAATTCCAAGTAACACGACAAAGTGCTGTTCGGCCTGCTTCAATCGGATATCACGTCGGTTAGCGCCTCACTTTTCGGGGGCGAGCGGCGACGCGGCAACTGACGAAGCTGACGCCATCGGCAGACAGTGGTCGGAGGAAGAACTCGAACAGCTTAGGAAAGCGCTAAGGGAGCATGGCACTAACTGGCCGAAGGTATCGGAACAGATACCGGGCAAGTCGAATCACCAGTGCAAGAACTACTACTTAACATACAGGAAAAAGTTGGGGCTCGATCAAGTCGTCGCCGAGTACTATCAATCGCTTGGCGAAGAGCGCAGGCCCTGCCTTACGGACGAGGAAGAGAGTGGAAGCAGTACGAGTAGCTGTGACGAGTTGGCTGTGCACGATACGAGCGATACGGCGAGCGCGGGCAGTCCCGCGAACACGATATCGAGCAGCACGCCCACGGCCTCGGCGTCCTCGTCGTCGACGCAGGGCGCAGGCCTGCCGATGCCTTTCCCGCAGTCTCAGGACGCCAAGGTGGCCGAGAAGCTAGCGGACGTGGCGGTGGTCTCGTTGGTCGCGCCCTCGCCGATGACCTCCTCCCAGCCGCCGCAGGCGAATCCTCCCACGAGCACGAGGGAGGACTATGACAGCTCTGCCACGGAGACGGCGGACGAAGGTCAGGGCGGTGCCGACTTGGACAATAGCGGCCTCCTGGTGACGCTGACGCTCGCGCCCTCGGGTAACAACGCGAGCAGCGGCGGCGCAGGAGGTAGCGCGGCTGGCACCTCGTCACATCAGCAGCCTTCTCAGCCTATCGTGCACACCCAACCCCAGCCACCGCCAATCGTACAGTCACCGCCATCCACCACGAGCAACAACAATCCGCTTACCGTAAAGgacCTCATGTTGGGTGTCATCGAGATGCAATTGAAACGTAATCAGAACAGTCCGGGTGGTTCGAGTTCGGTGCCGGTGAGCTCTGGCACCCCGACCATTTCCAGTATTCTGAAGACGGATCATCGTAACGATATCACCTTCGTGCGGGAATATAAGCCGCCCTCGCAAGCGCCGAGTATGTCGAACACTGCCATACAGAATCGAGATTCAACCCTGGCGACGCTGTCGGTTGTCTCGGGACCACATCACGGCCATCGTTCAGCTTCCAGTCCTCAGCAGATCAGTCAGATGCAGGCCACCATTACACCTTGCCCGCCTTCAACGCCTAGCCAACAAGCGCAACCGGGCAGTCAAGACATGCTGCCTAAGGAGGGACATGTTGTCATGCAGGTGCAGCAGTCGATGCGCGAAACGGAAGGTACTCTCGATCTGAGCATAAAGAAGCCGCGTCCGCAGCAGGAGTATAACCACACACTGCAGCCACCGCCGCCTCATAAACCTGCGGCTGTAAGTCATTATCGACCCGAACCACCACCGCCGGCTACTTACTACCATGCTCATTCTCATCCCGAACCCCAAAGTCGTGGAGCTAAAAGTCCGCACGTCTATGCCTCATCACCTAGACCGCAGGCCCCTCTCACTCCTAAAGTGAACAAAGTCTCAGTACCACCAACCTCGCATCCTAAGCTCTCGCCCAAACTGAGTAACATGCCTCCTACCCACAAAACCGGCTCTATCACCCACGGCACCCCCGTCTCTAGTGCCCGATACGACGGCCTGCTTAGACAGATGACTCCGCCAGGAAATGCCAACCAGCCGAACCCTAGCACTACCCCAGTTGGTTCTAAAGAAACGGGTTCCATCACCCAAGGGACTCCTGTACATCCATTTGCAGTGGACAAACGCCCTCCGATGTACGATTACCACCGTTCTATAAGACACTCGCCTGTGACGACAAGTAATGTACCAGTTCAGGCTCAAAATTCTGGAGTAGTTGTCAGTCACAGTCCAAgcGGTAGCAGTCAGTACAACTCCTATCCATCACGCCAGGCGCCCAGCTACACCATGGAACAACTCTCATCACGTCAAATAATTATGAATGATTATATAACTAGCCAACAAATGCATCCTCGTAATCGCAGCGGTGGTTCTGCTGAGGCTACAACTAAGAATGAACCTCCTGCCACTCTTTATTGCGCTAGCACACCGCCACCTCAATCTCATCCTCAAAATCGACAAGGCGTCATTCAAAGAAATACTACCATGCAGAAGCACTATCCACCTCCGCCTCCAGGTCTTGAAGCCTTCTCTAGTCTTGTAGACGTGGCCGTCCAACAACCCAGCCTACCAGTACCACATCCACCAGCGAGCAGCAGTGGCCATGAGGGACTTTGCATGTCCATCGAACGCATGTACACCGAGCGTTATGGAATGGATAACCGCTCATTGCAAAACATGCCAAGACTGGCTAGACAACAGGCGGCTCAATATCAAATTGCAGTCGCAATGCAGCAGAGGGAAGAGCAACGCGAACGCGAGAGAGATTTAATGCTGCGTGAAAAACAACAGCAGGAAGAAGAACAACAGCAACGGATTCAGCGCGAAAAAGAACAACAGCAACAGCTACATCATCAACAACAGATTGAAAGGATGCATCAGCGTGAAAAGGAGatccaacaacaacaacaagaaCATAGGTTGGCTCAACAACAGCGTGAAGAAATGCaccaagcagcagcagctgcagcagcggcgGATCACAGAATTGCTGTACAGCAACGCGAAAAAGAGatacaacagcaacaacagcagcagcagagtcACGCGGATCATAGGTTAAGCATGCaccaacaacagcagcaacgcGAGAAAGATATACAGCAGCAGCATTATCGGCTAGTTCAACATCAACGTGAGAAAGAGTTGCAAATGGCTGCAGCTGCACAGCGTGAAAAGGAACATCATGAGCAGCACAGGTTAGCGGTTCAGCAACGCGAAAAAGAAATTCAGCAACAAGAATTAAGGTTAGCAcagcaaaaaagagaaaaagaactCCAACAGCAACAGCAGGCGGCGGATCATCGATTGGCTGTACAAAGAGAAAGGGAAAATCTTGCATATCTGCAACAACAACAAAGATATCAGAAGCAGCAGATACAGCATATACAGCAACAACAGCGTATGGAGGCTGAAAGGCGTCAGATCGTGCAAATTTATAAAGATCAACAAGAAGCACAACTTTAccgagAACTGGCTGAACGGCAATGTGAATCACCCAGCATGCCAAAAGGCAGTGGTTTCTTTCAGCCTTCGCGAATACAACAACAGTCTCAACCACCTCCACCCTCCTCTAGGCACAGTCAATCATCTTCTGGTCAGCAAAGCGATTCGTCGTCTACGTTGACGGCGGCTAGTTTAATCGATGCTATAATAACACACCAAATAAATCAAAGTGCTGATAACAGCAATAGCGCTGCATCTTCCAGTAATCAGCCGACACGACCTGGTGATCGTCTTTTTCagGGATTTCATAGAGACAGTCCAGCAGAGCCTAACGGTATGGCTCACAGCCCAGCTGGGgaagaaaatgtttcaaatagtGCATCTGGTAGTGGTACTAGCGGTGGTAGTAAGGCCATTACTCTTGGCGAGCACGTTGATCACATTGTTAGCAAAGATTATGGACCGCCAATGTCTTCCTATCGGCCTTACCAAGGATATCAAATGTCGGATGATCAGTGGAAGAGAAGGAAAGGTGCTGAACCGGACTCTGTGAAATCTGGTGATGAACGTCAAATAATCCGAGTTGCTCAACAAAAACCTGCTTCGTCACAATCTCAACAGTCACATCAAAGTCAACAATCAGTAAGCAAGCAACAGCAACAATTCCACGCAGAGCCAGTTTCGCCGCCTGAACCCACTACAAATCACTATCCGCGACGCTTCTACGAGCCTAGCACTGCCACGACTACGACATCTGCGGCACCTTCTAATAAGTCGCATCTTTCGCCCTTGGACTatgtgaaaaacaaaattgtcgAAGTTATGCGTACCGAGGACGACAAGACGAGCTCCGGCGATCGTAATGGCGGTAGTAACGATAAGGAGGACAAATCCTGTGCGGACAATTCGCCAAGCGGAGAGATGGTTATTGACGAGTCGCCCAACCAGCCACCGGCGCCTACGCCCACAACCTTCTATCCGTTTAATGCGCTAGGTGTTCACACAGGACCACCTCCGGCACCCCCACCGTCTGGTGGTGGTGCTCCCGTACCAGTGGTGAAAAGTGAAGAACCGGCGCCTTTACTGCAGGCGCAATACGAGCCCCTCTCGGATGAGGATTGA
Protein Sequence
MNSGPAGGPGQPPQGLQASSSASSARDQHSQQGTDLSGLNITIMNITVPPVVPVPAGLRFVHPYLPPPPPHPHPPPQSVASVAQVAQVASSNSASPVSASSGPTSIVQQQVSRQQHPPSAPSPASSAAAAYTRDVYRNASPNVNERVAISVSSSPVSSQVVGVGSDYVVSSRGGDRPRISLLPAPASIAPAASPTAPTDYHAAAAAARNSRSGPTVAPAGILAMQPQDYRPSPVDMAQLQQQQQQQDAPPFKKIRLGAPAQQLPPTQQQQQQSISQTECHQRLSSQQDALIKQKQPVQQLQPLRIDTRTTGAYTPQTEAISPTLPEPNTQEDAAFRSTKDDLLQQIAKVDREIAKRETQISKLRKKLKELEEVAKQPLLEPGNKRPVEETSLQPKHQSLVQKIYAENRKKSEEAHRLLDKLGPKVKLPLYNQPSDTSVYQENRTRHQCMKSRLVARLRKEHAERASLHRQQSQTYAILVQEWHRKVEKLEATQKRKTKEAKNREFFEKVFPELRKQREDKERFNRVGARIKSEADLEEIMDGLQEQEMEDKKMRSYAVIPPLLLDAKQRKIAFQNRNGLLQPEELEALHSERKLINVWSQTEHEVFKEKYLQHPKNFGAIAQSFEHKSVADCVHHYYLTKKAENYKQLLRKSRRTRSSRNNPNNKVNNSNSTIGPIDILTTGVTTRLQREQQQKTQENPQSSSAASSSGANAPTTSTTSTTASSSSSTAVASSSVGTTPAGAASSSGGASAAGANSTSEPSTTTATTTITSSASVTASASVPSISATTTTSSVLTTTSTSSASSKDAREANKESKEIKQEPKDSILKDIKEESQSSSETLSSREIKVENKGALSSSSNTSATNTTAQSSSLQLEQQQQKDKKKGAGITGGSSATSRSKDKKKENHATPMETSDEEAQECSGRQLGPHPCSICQQTVEAGNQSRPLSRSQASQYGLREDQVPLGARVCNTCRCKSVRGRYTTCPLPGCPNLSSASSKQRVKRLRALPPKWNDLPPEIRDPIVQEFQIPSNTTKCCSACFNRISRRLAPHFSGASGDAATDEADAIGRQWSEEELEQLRKALREHGTNWPKVSEQIPGKSNHQCKNYYLTYRKKLGLDQVVAEYYQSLGEERRPCLTDEEESGSSTSSCDELAVHDTSDTASAGSPANTISSSTPTASASSSSTQGAGLPMPFPQSQDAKVAEKLADVAVVSLVAPSPMTSSQPPQANPPTSTREDYDSSATETADEGQGGADLDNSGLLVTLTLAPSGNNASSGGAGGSAAGTSSHQQPSQPIVHTQPQPPPIVQSPPSTTSNNNPLTVKDLMLGVIEMQLKRNQNSPGGSSSVPVSSGTPTISSILKTDHRNDITFVREYKPPSQAPSMSNTAIQNRDSTLATLSVVSGPHHGHRSASSPQQISQMQATITPCPPSTPSQQAQPGSQDMLPKEGHVVMQVQQSMRETEGTLDLSIKKPRPQQEYNHTLQPPPPHKPAAVSHYRPEPPPPATYYHAHSHPEPQSRGAKSPHVYASSPRPQAPLTPKVNKVSVPPTSHPKLSPKLSNMPPTHKTGSITHGTPVSSARYDGLLRQMTPPGNANQPNPSTTPVGSKETGSITQGTPVHPFAVDKRPPMYDYHRSIRHSPVTTSNVPVQAQNSGVVVSHSPSGSSQYNSYPSRQAPSYTMEQLSSRQIIMNDYITSQQMHPRNRSGGSAEATTKNEPPATLYCASTPPPQSHPQNRQGVIQRNTTMQKHYPPPPPGLEAFSSLVDVAVQQPSLPVPHPPASSSGHEGLCMSIERMYTERYGMDNRSLQNMPRLARQQAAQYQIAVAMQQREEQRERERDLMLREKQQQEEEQQQRIQREKEQQQQLHHQQQIERMHQREKEIQQQQQEHRLAQQQREEMHQAAAAAAAADHRIAVQQREKEIQQQQQQQQSHADHRLSMHQQQQQREKDIQQQHYRLVQHQREKELQMAAAAQREKEHHEQHRLAVQQREKEIQQQELRLAQQKREKELQQQQQAADHRLAVQRERENLAYLQQQQRYQKQQIQHIQQQQRMEAERRQIVQIYKDQQEAQLYRELAERQCESPSMPKGSGFFQPSRIQQQSQPPPPSSRHSQSSSGQQSDSSSTLTAASLIDAIITHQINQSADNSNSAASSSNQPTRPGDRLFQGFHRDSPAEPNGMAHSPAGEENVSNSASGSGTSGGSKAITLGEHVDHIVSKDYGPPMSSYRPYQGYQMSDDQWKRRKGAEPDSVKSGDERQIIRVAQQKPASSQSQQSHQSQQSVSKQQQQFHAEPVSPPEPTTNHYPRRFYEPSTATTTTSAAPSNKSHLSPLDYVKNKIVEVMRTEDDKTSSGDRNGGSNDKEDKSCADNSPSGEMVIDESPNQPPAPTPTTFYPFNALGVHTGPPPAPPPSGGGAPVPVVKSEEPAPLLQAQYEPLSDED

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

90% Identity
-
80% Identity
-