Basic Information

Gene Symbol
ncor1
Assembly
GCA_009193385.2
Location
NC:24340608-24371656[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 2.3e-08 1.8e-05 24.3 0.0 3 43 785 825 784 828 0.96
2 2 3.2e-14 2.5e-11 43.0 0.7 3 46 1290 1333 1288 1333 0.97

Sequence Information

Coding Sequence
ATGGACACGCCCCAGCAGAGCTACGGTTCGAGCTCGCGTCAAGCGGTGTCTCCGCGGACGGTCGAGGGTAGCGGTGTCGGGGGCGGCGCTGCTGCGGCGGCTGGTGGCAGCAGCGGTGGCGCCGGCACAGGCTCcccgcaacagcagcagcagcagcagcagcagcagcagcaacagcagccgcAGCTTCGCTatcaccagcagcagcagcagcagcagcaccaccaccaccaccaacAGCAGGCCTCGAGCACGACGGGCCCCCCGAGCTTGGCGGGGCCTCCAGCCCACAGCCTGCCGCCGCCGCACCACCCGCACTTCTACCACTACCtccatcagcagcagcagcaacagctgCACCAGTACCAGGTCGCCAAGgcacaagcagcagcagcggccgcCGCAGCAGCTGCAGGCCCCTCATCATCGCCGGGATCGTTGGCGATGAACAGTGGCCCGGCTGGCGGCCCTGGCCAGCCACCAGCGGGACTACAAGCGACCTCGTCCACCTCCTCTCGTGACCAGCACGTGcagcagcagcagcagcagcagcagggaAGTGACCCGAGCGGCCTGAACATTACGATAATGAACATCACGGTGCCACCAGTGGTTCCGGTACCGGCGGGTCTGCGCTTCGTCCACCCGTCGTACCTACCGCCTCCGCCGCCACACTCGCACCAGCCACCTtcgcagcaacaacagcagcagcagcagcagtcggcGGCTGCCCAGGTGGCGCAGATCGGCTCGAACAACAACTCGGCCTCGCCTGTGTCCGTCTCCTCGGGACCCTCGTCCATCGTTGTGCAGCAGCAGGTCAGCGgtaggcagcagcagccctcgCCAGCCTCGAGCGCCGCCGCAGCCTACACGAGGGACGTCTATCGCAACGCCAGTCCCAATGTGAACGAGCGCGTAGCGATAAGCGTGAGCAGTAGTCCAGTCTCTTCGCAAGTGGTTGGAGTTGGCGCGGGTGGCGAATATGTAGTAAGCGGCCGGGGGGATCGGCAGAGGATATCGCTATTACCGGCACCAGCCTCGATAGCGCCCGCGGCTTCGCCCACCGCGCCCACGGATTATCACGCGGCCGCGGCTGCTGTGGCGCGCAACAGCAGGGGCAGCGCCGGTGCGCCGCCACCACCGTCGCCTGCCGGCCTCCTGGCCGCCATGCAGCCGCAGGACTATCGGCCCAGTCCCGTTGACATggcgcagcaacagcagcagtcgcagcagcagcagcagcaggatgCGCCGccctttaaaaaaattcgccTCGGTCAACCCACCCAGCTGGTGCCGTCAACCCAGCAACACAGCATTAGCGGCGTTAATGTGATGTCGCATTCAGAGGTGTTTAGAAACCCGGTGCAGGACACGCTTATCATTAAACAGAGGGTCCAAACCTCACAGATCCAGCCTCTGAGGATAGATACAAGGCCGACGGCTGGTGTGTACACGCCACAAACAGAGGCGATTTCGCCGACTCTTCCTGAGCCTAATACACAAGAGGACACGGTATTTAAAATCACCAAAGACGATCTTTTGCAACAGATCGCCAAGGTTGATCGAGAAATTGCAAAAAGGGAATCACAGATTAGCAAACTTCGGAAAAAGGTGAAAGAGATAGAAGAAGTAGCTAGTAAACCCTTGGAGGCGCCTGGCACAAAACGGCCTGTGGAAGAAGCGTCTTCGCAACCCAAGCATCAGTCCCttgtacaaaaaatatacgcTGAGAATAGGAAAAAAGCGGAAGAGGCGCACAGGTTGTTAGACAAGCTAGGTCCGAAAGTGAAACTGCCACTCTATAATCAGCCCTCGGATACCAGCGTGTACCAGGAGAATCGCGTTAGGCACCAGTGCCTGAAAACGCGGCTCGTTGAGAGACTTCGGCAGGAACACGCGGATCGTGCCTCGTTGCATCGCCAGCAGTCACAGACCTATGCGATACTCGTGCAGGAGTGGCACCGAAAGGTAGAGAAGCTCGAGGCGACGCAAAAGCGTAAGACGAAGGAGGCCAAGAACCGTGAGTTCTTTGAGAAGGTCTTTCCGGAACTGCGCAAGCAACGCGAGGACAAGGAACGATTCAACAGGGTCGGAGCACGAATCAAGAGCGAGGCCGATCTTGAAGAAATCATGGATGGTCTGCAAGAGCAGGAGGAAGAGTTGTCGACCGAGTTAAAAAATGCGTTAAAAGAACTTCAGATGGAGGACAAGAAGATGCGTTCGTACGCGGTGATACCGCCGCTGTTGCTGGACGCGAAACAGCGGAGGATCGCGTTTCAGAATCGCAACGGTCTACTGCAGCCTGAGGAGCTCGAGGCGATGCACAGCGAGAGGAAGCTGATCAACGTTTGGAGCCAGACCGAGCACGATATGTTCAAGGAGAAGTACCTCCAGCACCCCAAGAACTTTGGAGCGATAGCCCAGTCATTCGAGCACAAGTCCGTCGCGGATTGCGTGCATCACTACTACCTCACTAAGAAAGCGGAGAATTATAAGCAGCTATTGAGAAAATCGAGGCGTACGCGTAGTTCTCGAAACAATCCTAACAATAAGGTAAATAATAGTAACTCCACTATCGGACCTATAGATATATTGACGACGGGAGTAACGACGAGGCTGCAGCGTGAGCAGCAACAGAAAACCCAGGAAAATCCCCAGAGCAGCGCGGCGGCGTcgagtagtagtagtagcgcGAATGCGACGACGTCGAGCTCCTCTTCAACAACAAACACCACCTCCACCTCGTCCGCGTCGACGGCGGTCACGAGTGCGAGCTCCGTCACCACGAGCTCGTCGTCCGCGTCTTCGAGTAACGCTGCCGTGGCTGCTGCGGCGAGTTCGTCCACCGGTAGTAGTAGAGACGCTGCTTCGGCGAGTTCGACCGCGGAGCCCTCGTCGACAGCAACGACGACCACAATTACGTCGACATCCACGACTGCAGCGTCAGCATCCGTCCAGAGTAccagcgcgacgacgacgacgtcgagcGTACTCACGACGACGCCCACGTCGTCGACCAGCGCCAAGGACGCTCGCGAAGCCAATAAGGAGAACAAAGAGATTAAGACCGAGCCCAAAGACTCGATACTCAAGGATATCAAGGAGGAGTCACAGTCCAGCTCCGAGACACACTCCAGCAGGGAAATAAAGGTTGAAAGCAAGGGCGCCCTCTCCTCGTCATCCAACACAAGTACGGCCAATACCAACAACGCGAGTAGTAACCTTCAGATAGAGAttcagcagcaacagcagcagcagcaacaacaacaacagcaacagcaaaaagacaagaaaaagaatgcgggagtcactTGCGGATCTACCGCCATCAGCAGGTCGAAGgataagaaaaaggaaaatcacGCGACGCCTATGGAGACCAGTGATGAGGAAGCCCAGGCCATGGACGCGATGGAACTCGGCGGCAGGCAGCTGGGGCCCCACCCCTGCGCGATCTGCCAGACGATGGTGGAGGCGGGCAACCAGAGCCGGCCGCTGTCGCGCAGCCAGGCCTCGCAGTACGGGCTGCGCGAGGAGCAGGTGCCCCAGGGCGCCAGGGTCTGCAACACCTGCCGCTGCAAGTCCGTCCGGGGACGGTACACCACCTGCCCGCTGCCCGGATGCCCCAACCTCAACAGCGCCAGCAGCAAGACCAGGGTCAAGCGGCTGCGGGCGCTGCCGCCCAAGTGGAACGATCTGCCGGCCGAGATCCGGGACCCGATCGTCCAGGAGTTCCAGATCCCGAGCAACACGACCAAGTGCTGCTCGGCCTGCTTCAACAGGATATCGCGCCGCCTGGCGCCCCACTTCTCCGGCTCGAGCGGCCCCGACGGCGCGGACGAGGCCGACGCGATCGGCCGGCAGTGGAGCGACGAGGAGCTCGAGCAGCTGCGCAAGGCCCTGCGGGAGCACGGCACCAACTGGCCCAAGGTCTCCGAGCAGATAGCCGGCAAGTCGAACCACCAGTGCAAGAACTACTACCTGACCTACCGCAAGAAGCTCGGGCTGGACCAGGTCGTCGCCGAGTACTACCAGTCGCTCGGCGAGGAGCGCAGGCCCTGCCTCACCGACGAGGAGGAGAGCggcagcagcaccagcagctGCGACGAGTTGGCTGTGCATGATACGAGCGATACTGCGAGCGCGGGCAGTCCCGCGAACACGATATCGAGCAGCACGCCCACCGCCTCGGCggcgtcctcgtcgtcggcgaCGGCGGGCGGCGGCCTGCCGATGCCCTTCCCCCAGTCGCAGGACGCGAAGGTCGCCGAGAAGCTCGCTGACGTGGCGGTGGTGTCGTTGGTCGCGCCCTCGCCCATGACCAGCTCCCAGCAGCCGGCCCAGCAGAATCCGCCCACGAGCACGAGGGAGGACTACGACAGCTCTGCCACGGAGACGGCGGACGAAGGTCAGGGTGGTGCCGACTTGGACACTAGCGGCGTCGTGGTCACGCTCGCGGCGCCCGCGGCCGTTGTCgccagccagcagcagcagcagcagcagcagccgccgcccGGACTCGTCCAGACGCAGCCCCAGCCGCCGGCGCTCGTGCAGTCGCCGCCATCCACCACGAGCAACAACAACCCGCTCACCGTCAAGGACCTCATGCTGGGCGTGATCGAGATGCAGCTGAAGCGCAACCAGAACAGCCCGGGTGGCTCGAGGTCGTCGGTACCCGTCAGCTCGGGAACGCCCACGATATCGAGTATCCTGAAGACGGACCACCGCAACGACATCACCTTCGTGCGCGAGTACAAGGCGCCGACACAAGCTCCCAGCATGTCCAACACTGCCATACCCAATCGGGATCCGAACCTGGCGACGCTCTCGGTTGTGTCCGGCCCGCATCACGGACATAGGTCGGCCTCCAGTCCACAGCAGATGAGCCAGATGCAGGCGACCATCACCCCCTGCCCGCCGTCGGCAGCCAACCAACAGCCGCAGCCCACTGGACAGGATATGCTGCCCAAGGAGGGCCTGGTCGTCATGCAGGTACAGCAAGCGATGCGAGACACGGAAGGCACGCTTGATCTGAGCATCAAAAAGCCACGCCAGCAGCAGGAGTATAATCACACGCTGCAGCCACCGCCACCGCATAAGCCAGCCGCGGTGAGTCACTACAGAGCGGAACCCCCTCCGCCGCCGCACTCGACCTACTACCACTCTCACGCTCATCCGGAATCTCAGAGCCGCGGTGCCAAAAGTCCGCACGTGTACGCCTCGTCGCCGAGGCCGCAGGCGCCTCTTACTCCCAAGATGACCAAAGTCTCCGTGCCGCCGACATCGCACCCTAAGCTCTCGCCTAAACTCAGCAACATGAGCACGCCGCACAAGACCGGCTCGATCACTCACGGAACTCCAGTATCCACCACAAGGTACGACGGACTGCTCAGGCAGATGACGCCACCTGGAAACGCCAATCAGCCCAATCCCAGTACTACTCCAGTAGGTTCCAAAGAAACGGGCTCCATCACGCAAGGAACGCCTGTACACCCATACGCCGTGGACAAGCGTGCTCCAATGTACGACTACCGTTCCATCAGACACTCTCCTGTCACTACGAGCAACGTGCCTGTACAGGCGTCTCAGAACTCCGGAGTCGTCGTCAGTCACAGCCAAAGCGGCAGCAATCAATACAACTCGTACCCGCCACGTCAAGCTCCGAATTATACCATGGAGCAACTCTCGTCTCGTCAAATCATCATGAATGACTACATAACCAGCCAACAGATGCATCCGCGCAACCGCAGCGGCGGTTCCGCCGAAGGCGAACGACCCAAAAGCGAAGCTCCCCCGGACTTTTTATATTTCCACGCGAATACTCCTCCTTCCCAGACGCACACCCAGCCGCGTCAGGGGGTTATCCACAGGCACAATACGCCGAAACATTACGCACCTCCACCACCTGGTCTCGAAGCTTTCTCCAGCTTAGTAGATGTGGCCGTCCAGCAGCCAAGTCTGCCCGTACCCCACCCACCGccagccagcagcagcgggcaTGAAGGTCTCTGCATGTCTATCGAGCGCATGTATCCGGGAGGTTACACGATAGATAATCGTTCGCTGCAGAATATGCCCAGGTTGGCTAGACAACAGACGATGCAACATCAAATGGCTGCAGCCATTCAGCAAAGAGAAGAGCAGCAACGAGAACGCGAGCGTGATAACATGTTGCGCGAGAAGCAGCAGCAAGAAGAGGAACAGCGGGAACGTATTCAGCGCGAAAAagaacagcagcaacaacaacagcagctgCACCATCAAAGGGAGATGGAGCGCATTGCCGTGCATCAGCGTGAAAAGGAGAttcaacaacaacagcaagaGCACAGATTAgctcagcagcagcgagagcaAGAAATGCATCTAGCTGCGGCTGATCACCGAATAGCTGTTCAGCGTGAGAAAgagatgcagcagcagcagcagcagcagcagcagcaacagcaacaacagcagcaacagcagcagcaacgagaaagagagcgagaacgGGAACGGGAGCgggagcgagaacgagaacgAGAACGAGAACGTGAGCGGGAACAGCAGAGCCACGCGGATCATAGACTAAGTATGcatcagcaacagcagcagcgcgagaaGGATATGCAGCAGCAACATTATCGGCTTGTGCAACACCAGCATCAGCGCGAGAAGGAGATGCAGTTGGCTGCTGCCGCAGCACAACGCGAAAAGGAGCATCAGGAGCACAGACTGGCAGTGCAACAACAACGCGAAAAAGAAATTCAGCAGCAAGAGCTAAGGCTCCAGCAACAGCATGCGGATCATAGGCTGGTCATGCAACGCGATAATCTAGCTTACCTGCAACAGCAACAGCGATTTCAGAAACAGCAAATGCAACAAATTCATCAACAGCAACGTTTAGAGGCCGAGAGACGGCAAATTGTGCAGATTTACAAGGATCAGAAAGAGGCTCATCTGTATAGGGAACTGGAGCGACAATGTGAATCACCCAGCATGGCAAAGGGCGGCGGGTTCTTCCAGCCTACGCGAATACAGCAACAATCTCAACCGCCTCCACCTTCTTCTAGGCACAGTCAATCATCTTCCAATCAACAAAGTGACTCATCGTCTACATTGACTGCTGCCAGTTTGATTGATGCTATCATTACGCATCAAATCAATCAGAACACTGACAACAACAGTGGCAATAATCCTGCCAACAATCAGCCAACACGTCCTGGTGATAGACTTTTTCAGGGTTTTCATAGAGATAGTCCAGCAGAACCTAACGGCATGGCTCACAGTCCAGCTGGGGAAGAAAGAGAATCTAACAGAGAGTCGGGAAGTGGAAGTGGCAGCGCAAGCGGTGGTAAGGCCATTACTCTTGGCGAGCACGTAGACCACATTGTGAGCAAGGATTATGGGCCGCCGATATCTTCCTACAGGCCTTATCAAGGGTATCAGATCTCGGAAGATCAGTGGAAGCGGAGAAAAGGTGCTGAACCGGATTCTGTGAAATCTGGCGATGAGCGACAAATAATCCGCGTCGCCCAGCAGAAGTCAGCTTCTTCACAGTCTCAGCAGTCCCACCAAAGTCAACAGTCGAGcaagcaacagcaacagcaacaattTCACACTGAGCCAGTGTCGCCACCAGAGCCCTCGACGAACCACTATCCGCGTCGTTTCTACGAGCCCAGCACTGCCACGACCACGACTTCAGTGACGCCCTCCAGCAAGTCACACCTTTCACCTCTCGACTATGTGAAGAACAAAATTGTCGAAGTGATGCGCACTGAGGATGACAAAACAAGCTCCGGTGACAGAAACGGCGGAGGTGCTGGCAATGACAAAGACGACAAATCTTGCGCTGACAGCTCGCCGGGTGGAGAGATGGTAATCGACGAGTCGCCCAGTCAGCCGCCAGCTCCGACTCCAACGACCTTTTATCCATTCAACGCGCTAGGCGTACACACTGGGCCACCACCTGCGCCACCGCCGACGAGTGGAGGAACTGCCGTGACGGTTGTCCAAAGCGAGGAACCTGCGCCTCTACTCTGCGCCCAATACGAGGCTCTCTCGGACGAGGATTGA
Protein Sequence
MDTPQQSYGSSSRQAVSPRTVEGSGVGGGAAAAAGGSSGGAGTGSPQQQQQQQQQQQQQQPQLRYHQQQQQQQHHHHHQQQASSTTGPPSLAGPPAHSLPPPHHPHFYHYLHQQQQQQLHQYQVAKAQAAAAAAAAAAGPSSSPGSLAMNSGPAGGPGQPPAGLQATSSTSSRDQHVQQQQQQQQGSDPSGLNITIMNITVPPVVPVPAGLRFVHPSYLPPPPPHSHQPPSQQQQQQQQQSAAAQVAQIGSNNNSASPVSVSSGPSSIVVQQQVSGRQQQPSPASSAAAAYTRDVYRNASPNVNERVAISVSSSPVSSQVVGVGAGGEYVVSGRGDRQRISLLPAPASIAPAASPTAPTDYHAAAAAVARNSRGSAGAPPPPSPAGLLAAMQPQDYRPSPVDMAQQQQQSQQQQQQDAPPFKKIRLGQPTQLVPSTQQHSISGVNVMSHSEVFRNPVQDTLIIKQRVQTSQIQPLRIDTRPTAGVYTPQTEAISPTLPEPNTQEDTVFKITKDDLLQQIAKVDREIAKRESQISKLRKKVKEIEEVASKPLEAPGTKRPVEEASSQPKHQSLVQKIYAENRKKAEEAHRLLDKLGPKVKLPLYNQPSDTSVYQENRVRHQCLKTRLVERLRQEHADRASLHRQQSQTYAILVQEWHRKVEKLEATQKRKTKEAKNREFFEKVFPELRKQREDKERFNRVGARIKSEADLEEIMDGLQEQEEELSTELKNALKELQMEDKKMRSYAVIPPLLLDAKQRRIAFQNRNGLLQPEELEAMHSERKLINVWSQTEHDMFKEKYLQHPKNFGAIAQSFEHKSVADCVHHYYLTKKAENYKQLLRKSRRTRSSRNNPNNKVNNSNSTIGPIDILTTGVTTRLQREQQQKTQENPQSSAAASSSSSSANATTSSSSSTTNTTSTSSASTAVTSASSVTTSSSSASSSNAAVAAAASSSTGSSRDAASASSTAEPSSTATTTTITSTSTTAASASVQSTSATTTTSSVLTTTPTSSTSAKDAREANKENKEIKTEPKDSILKDIKEESQSSSETHSSREIKVESKGALSSSSNTSTANTNNASSNLQIEIQQQQQQQQQQQQQQQKDKKKNAGVTCGSTAISRSKDKKKENHATPMETSDEEAQAMDAMELGGRQLGPHPCAICQTMVEAGNQSRPLSRSQASQYGLREEQVPQGARVCNTCRCKSVRGRYTTCPLPGCPNLNSASSKTRVKRLRALPPKWNDLPAEIRDPIVQEFQIPSNTTKCCSACFNRISRRLAPHFSGSSGPDGADEADAIGRQWSDEELEQLRKALREHGTNWPKVSEQIAGKSNHQCKNYYLTYRKKLGLDQVVAEYYQSLGEERRPCLTDEEESGSSTSSCDELAVHDTSDTASAGSPANTISSSTPTASAASSSSATAGGGLPMPFPQSQDAKVAEKLADVAVVSLVAPSPMTSSQQPAQQNPPTSTREDYDSSATETADEGQGGADLDTSGVVVTLAAPAAVVASQQQQQQQQPPPGLVQTQPQPPALVQSPPSTTSNNNPLTVKDLMLGVIEMQLKRNQNSPGGSRSSVPVSSGTPTISSILKTDHRNDITFVREYKAPTQAPSMSNTAIPNRDPNLATLSVVSGPHHGHRSASSPQQMSQMQATITPCPPSAANQQPQPTGQDMLPKEGLVVMQVQQAMRDTEGTLDLSIKKPRQQQEYNHTLQPPPPHKPAAVSHYRAEPPPPPHSTYYHSHAHPESQSRGAKSPHVYASSPRPQAPLTPKMTKVSVPPTSHPKLSPKLSNMSTPHKTGSITHGTPVSTTRYDGLLRQMTPPGNANQPNPSTTPVGSKETGSITQGTPVHPYAVDKRAPMYDYRSIRHSPVTTSNVPVQASQNSGVVVSHSQSGSNQYNSYPPRQAPNYTMEQLSSRQIIMNDYITSQQMHPRNRSGGSAEGERPKSEAPPDFLYFHANTPPSQTHTQPRQGVIHRHNTPKHYAPPPPGLEAFSSLVDVAVQQPSLPVPHPPPASSSGHEGLCMSIERMYPGGYTIDNRSLQNMPRLARQQTMQHQMAAAIQQREEQQRERERDNMLREKQQQEEEQRERIQREKEQQQQQQQLHHQREMERIAVHQREKEIQQQQQEHRLAQQQREQEMHLAAADHRIAVQREKEMQQQQQQQQQQQQQQQQQQQQREREREREREREREREREREREREQQSHADHRLSMHQQQQQREKDMQQQHYRLVQHQHQREKEMQLAAAAAQREKEHQEHRLAVQQQREKEIQQQELRLQQQHADHRLVMQRDNLAYLQQQQRFQKQQMQQIHQQQRLEAERRQIVQIYKDQKEAHLYRELERQCESPSMAKGGGFFQPTRIQQQSQPPPPSSRHSQSSSNQQSDSSSTLTAASLIDAIITHQINQNTDNNSGNNPANNQPTRPGDRLFQGFHRDSPAEPNGMAHSPAGEERESNRESGSGSGSASGGKAITLGEHVDHIVSKDYGPPISSYRPYQGYQISEDQWKRRKGAEPDSVKSGDERQIIRVAQQKSASSQSQQSHQSQQSSKQQQQQQFHTEPVSPPEPSTNHYPRRFYEPSTATTTTSVTPSSKSHLSPLDYVKNKIVEVMRTEDDKTSSGDRNGGGAGNDKDDKSCADSSPGGEMVIDESPSQPPAPTPTTFYPFNALGVHTGPPPAPPPTSGGTAVTVVQSEEPAPLLCAQYEALSDED

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00692853;
90% Identity
iTF_01274406;
80% Identity
-