Plou008120.1
Basic Information
- Insect
- Psyttalia lounsburyi
- Gene Symbol
- retn
- Assembly
- GCA_030522865.1
- Location
- JAPYZN010002630.1:9526-15621[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.1e-17 1.6e-13 51.8 0.1 29 89 4 62 1 62 0.93 2 2 5.7 3e+04 -3.5 0.0 27 38 220 231 204 232 0.70
Sequence Information
- Coding Sequence
- ATGGCGAAATCCGTATTGGATCTCTACGAACTCTACAATTTGGTAATTGCTCGGGGCGGTCTCGTCGACGTAATCAACAAGAAACTCTGGCAGGAAATCATCAAGGGTCTCCACCTGCCGTCTAGCATCACATCCGCTGCATTTACCCTGCGAACGCAATACATGAAATATCTGTATCCCTATGAGTGCGAGAAACGAAGACTGTCCACCCCAGCGGAGCTCCAAGCAGCCATTGATGGAAACAGACGCGAGGGACGTCGCAGTAGCTACGGTGCCTATGGCGGAGGTGGGGGTGATAATATGATGCAGAGAAATTCCCACACACCAAGTTCACTCGCCTTGCACGCCGGAATGTCACCATTATCACTGGTTACAGCAGTAGGAGGTCAGCATCATGGTTCACAATCACTGCTGAATGGAAGCACAGCACATACCCCCCTGACGCACCATCCACATCACCCCCAGGGTTTGGGACAACTACCAAATGGTCCAATACCGGGGCTGGCAGCGGCTGAGCTGGAGGCGCGAATGGCCGAATACATAAAACTGTTCAACAAAGAGTTTAGAAACGCCGGGGCAAGTACACCACCGCCAATTCACCGGCAGGGTAGTGCGTCGCCCCCCTCGAGCACACCTCCCCGTGACAATGCTATTGCCGAGATGTCGCGTCTCACACTATGGAATCTTTACAACAACAACACACTTCCCGAGCCCCAGAGGGAGGCCCTCGATCTGGGCCTGAGGTCTTCACCAATGTCTTCATCACCCGCGAGACATAGTCCTCAGTCATCTGGTGGCAGTATGAGGGTAAAAAGGGATTCAGAATTGACCGGCAATTGTGGCCCACTACCACCCAAGAGATCTCTCTCAGACGACGAGTCAACTCACGAGAAGCCCGTGCCTCCTTTGCCTGGTACACACATCAAAATATCAAACAGAGACGGGAGAAATGGGGATAACTCACTAGTTGTCAGCATGGAATTAAATGGCGTCATGTACGAGGGAGTTTTATTTGCCCAGTCGCACAACAGAAATACTAGTGCAACGAATAACAATACGAAGCAACCGAGAAGTATTGTATCGTGA
- Protein Sequence
- MAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKRRLSTPAELQAAIDGNRREGRRSSYGAYGGGGGDNMMQRNSHTPSSLALHAGMSPLSLVTAVGGQHHGSQSLLNGSTAHTPLTHHPHHPQGLGQLPNGPIPGLAAAELEARMAEYIKLFNKEFRNAGASTPPPIHRQGSASPPSSTPPRDNAIAEMSRLTLWNLYNNNTLPEPQREALDLGLRSSPMSSSPARHSPQSSGGSMRVKRDSELTGNCGPLPPKRSLSDDESTHEKPVPPLPGTHIKISNRDGRNGDNSLVVSMELNGVMYEGVLFAQSHNRNTSATNNNTKQPRSIVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01272886; iTF_00438539; iTF_00168172; iTF_00350785;
- 90% Identity
- iTF_01272886; iTF_00350785; iTF_00168172;
- 80% Identity
- -