Pcon006985.1
Basic Information
- Insect
- Psyttalia concolor
- Gene Symbol
- retn
- Assembly
- GCA_030522845.1
- Location
- JAPYZM010001995.1:32497-38993[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.7e-20 2.2e-16 61.0 0.0 16 89 3 74 1 74 0.94 2 2 7.6 3.6e+04 -3.7 0.0 27 38 232 243 217 244 0.70
Sequence Information
- Coding Sequence
- ATGGCCGCAGGAACACCGATAAATCGGCTACCAATAATGGCGAAATCCGTATTGGATCTCTACGAACTCTACAATTTGGTAATTGCTCGGGGCGGTCTCGTCGACGTAATCAACAAGAAACTCTGGCAGGAAATCATCAAGGGTCTCCACCTGCCGTCTAGCATCACATCCGCTGCATTTACCCTGCGAACGCAATACATGAAATATCTGTATCCCTATGAGTGCGAGAAACGAAGACTGTCCACCCCAGCGGAACTCCAAGCAGCCATTGATGGAAACAGACGCGAGGGACGTCGCAGTAGCTACGGTGCCTATGGCGGAGGTGGGGGTGATAATATGATGCAGAGAAATTCCCACACACCAAGTTCACTCGCCTTGCACGCCGGAATGTCACCATTATCACTGGTTACAGCAGTAGGAGGTCAGCATCATGGTTCACAATCACTGCTGAATGGAAGCACAGCACATACCCCCCTGACGCACCATCCACATCACCCCCAGGGTTTGGGACAACTACCAAATGGTCCAATACCGGGGCTGGCAGCGGCTGAACTGGAGGCGCGAATGGCCGAATACATAAAACTGTTCAACAAAGAATTTAGAAACGCTGGGGCAAGTACACCACCGCCAATTCACCGGCAGGGTAGTGCGTCGCCCCCCTCGAGCACACCTCCCCGTGACAATGCTATTGCCGAGATGTCGCGTCTCACACTATGGAATCTTTACAACAACAACACACTGTACCCAAATATGCACCAGCCACCAGCATCACCCCAGCCCTCGCACTCCCCCAACCCCCAGGCCTCGAGTCCCGAGCCCCAGAGGGAGGCCCTCGATCTGGGCCTGAGGTCTTCACCAATGTCTTCATCACCGGCGAGACATAGCCCTCAGTCATCTGGTGGCAGTATGAGGGTAAAAAGGGATTCAGAATTGACCGGTAATTGTGGCCCACTACCCCCCAAGAGATCTCTCTCAGACGACGAGTCAACTCACGAGAAACCCGTGCCTCCTTTGCCTGGTACACACATCAAAATATCAAACAGAGACGGGAGAAATGGGGATAACTCACTAGTTGTCAGCATGGAATTAAATGGCGTCATGTACGAGGGAGTTTTATTTGCCCAGTCGCACAACAGAAATGCTAGTGCAACGAATAACAATACAAAGCAACCGAGAAGTATTGTATCGTGA
- Protein Sequence
- MAAGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKRRLSTPAELQAAIDGNRREGRRSSYGAYGGGGGDNMMQRNSHTPSSLALHAGMSPLSLVTAVGGQHHGSQSLLNGSTAHTPLTHHPHHPQGLGQLPNGPIPGLAAAELEARMAEYIKLFNKEFRNAGASTPPPIHRQGSASPPSSTPPRDNAIAEMSRLTLWNLYNNNTLYPNMHQPPASPQPSHSPNPQASSPEPQREALDLGLRSSPMSSSPARHSPQSSGGSMRVKRDSELTGNCGPLPPKRSLSDDESTHEKPVPPLPGTHIKISNRDGRNGDNSLVVSMELNGVMYEGVLFAQSHNRNASATNNNTKQPRSIVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01273581;
- 90% Identity
- iTF_01273581;
- 80% Identity
- -