Csp008061.1
Basic Information
- Insect
- Coelinius sp
- Gene Symbol
- retn
- Assembly
- GCA_035578325.1
- Location
- JAOZGT010000005.1:3642368-3665322[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.2e-26 1.1e-22 80.6 0.0 2 89 47 132 46 132 0.96 2 2 6.5 2.3e+04 -3.7 0.0 26 38 288 300 274 301 0.68
Sequence Information
- Coding Sequence
- ATGAAGGAGTCTGACAGTGGGTGCACTGAAGAGAGCATTTGGGACTCTCCCAACAAGCGTTCGGCTGGACCGAACATTCTTGGTGAAACTTCTATGAATCTTCTTGGGAAGCTGTACGAGATAAACGATGATCCGAAGCGCAAGGAGTTTCTCGACGATCTCTTCAGTTATATGCAAAAACGAGGTACACCAATCAATCGGCTACCAATAATGGCAAAATCAGTATTGGATCTCTACGAACTCTACAATTTGGTAATTGCTCGGGGTGGTCTTGTAGAcgtaataaacaaaaaattatggcAGGAAATTATCAAGGGACTGCACCTGCCGTCTAGCATCACATCCGCTGCATTTACACTACGAACCCAATACATGAAATATCTTTATCCCTACGAGTGTGAGAAACGAAGACTGTCAACACCGGCTGAACTACAAGCGGCTATCGATGGAAACAGACGGGAAGGAAGACGCAGTAGTTACGGTGCATACGGAGGTGGAGGTGATAATATGATGCAAAGAAATTCCCACACACCAAGTTCACTCGCACTGCACGCTGGAATGTCACCATTATCACTGGTTACAGCAGTGGGAGGTCAGCATCATGGTTCACAATCACTAATGAATGGAAGCACAGCACATACCCCCCTGACGCACCATTCACATCACCCCCAGGGTTTGGGACAACTACCAAATGGATCAATATCAGGATTAGCGCAGGCTGAAATTGAGGCACGAATGACCGAGTacataaaattaatcaacaaagaATTTAGAAGTGCTGGTGCAAGTACACCACCACCAATTCACAGGCAGGGAAGTGCATCACCACCATCAAATACACCACCACGTGACAATGCAATTGCTGAAATGTCACGACTTACATTATGGAATTTATACAACAATAATACACTCTATCCTAATATGCATCAGCAGCCACTATCACCACAGCCCTCACACTCACCAAATGCCCAAGCATCGAGTCCTGAGCCACAGAGAGAGGCCCTTGATTTGGGCCTTAGATCATCACCAATGTCATCATCACCAACGAGACACAGTCCACAGTCATCGGGAGGTAGTTTAAAGGTAAAAAGGGATTCTGAATTAACGGGCAATCCTGGCCCACTGCCACCCAAAAGATCGCTCTCAGACGACGAATCAATACATGAGAAACATGTACCCTCATTACCTGGTACACAcattaaaatatcaaacagGGGAGATGGTAGAAATGGTGATAATTCACTGGTTGTCAGTATGGAATTAAATGGTGTTATGTATCAGGGAGTTTTATTCGCTCAGTCAGACAGTAGAAATGCTAATGCAACGAATAATAACACCAAACAACCAAGAAGTATTGTATCGTGA
- Protein Sequence
- MKESDSGCTEESIWDSPNKRSAGPNILGETSMNLLGKLYEINDDPKRKEFLDDLFSYMQKRGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKRRLSTPAELQAAIDGNRREGRRSSYGAYGGGGDNMMQRNSHTPSSLALHAGMSPLSLVTAVGGQHHGSQSLMNGSTAHTPLTHHSHHPQGLGQLPNGSISGLAQAEIEARMTEYIKLINKEFRSAGASTPPPIHRQGSASPPSNTPPRDNAIAEMSRLTLWNLYNNNTLYPNMHQQPLSPQPSHSPNAQASSPEPQREALDLGLRSSPMSSSPTRHSPQSSGGSLKVKRDSELTGNPGPLPPKRSLSDDESIHEKHVPSLPGTHIKISNRGDGRNGDNSLVVSMELNGVMYQGVLFAQSDSRNANATNNNTKQPRSIVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01273581;
- 90% Identity
- iTF_01273581;
- 80% Identity
- -