Pcon009955.1
Basic Information
- Insect
- Psyttalia concolor
- Gene Symbol
- ttk
- Assembly
- GCA_030522845.1
- Location
- JAPYZM010003725.1:20527-23354[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 9.9 2.4e+04 -3.8 0.0 5 14 199 208 198 212 0.85 2 2 1.6e-10 3.9e-07 30.7 0.1 2 45 337 380 336 380 0.91
Sequence Information
- Coding Sequence
- ATGGAGGCGTCCTCGTCGGAGCAGCACTTCTGCTTGCGCTGGAACAACCACAGAACAAACTTGTTAACAGCATTCAGCGAGTTATTTCACAATGGCGCCTTCACCGATGTCGAGCTGCTTGTTGAGGGGGAGACATCTCTGGTGCCCTTCAAATGCCACAAGATGGTCCTCGCCGCCTGTTCAAACTACTTCCAGGAGATATTTTCGTACACCCCCACCGAGCAGTATCCGATAATTGTCCTTACAAATGTCCGTGAAGCAGAGATGAAGGCAATTCTCGAGTTCATGTATCAAGGAGAGGTCAGCGTTTCGCAGGAGGAGATGACCGATATATTCAAGGTCGCAAGAATGTTGAAGATAAAGGGTCTGGTGGAGTACGACAAATCACACAGACGCTCGGTATCGCCGCCCCCTGCTATCAGTAGTACAGAGCGAAGTGCTTCGTTTGGCAACGAGAGCTTGCACAACGGCTATCGCTCGCCCCCCCATTCCACGAGTTCGTCCTCGTTTTATCCCACTTACGGAAAATCTCCGGCTCTTGTTCACAATCCAGCGGCTCACATGGCACCCGCCGGATGGAGTCCACTGGCCAGTCTCTCATTAGCCGCCCAATCTGTCATGAATGCACCCCTGACACCGCGAGCTGCTGCTCTCTTCCCGGGAGTCTACGAGACTGAGGCCAACCACCTCCGCAAGCAGATGAACAGTCTCATTCTTAACAGGGATACACCGATTTTGAGAACTGTTCTGGGACAGGGACAGGCCGACAGCTCGCAGGGGGTACCACCCATTCATGGAGATGGCCATGATGTTTATCGCAGTTCTAGCAATGGATCGGCTCACGATGTGGGGGATGACAGGAAGAGTAGTGTGGATTTGAGTCTCAGTCGCAATGGGAATGGACACAGTCCCTATGCCACGGATATTTCCATGGATGAGTTTGATAAGAAATCTTCGGGACAGCAGAATCGAAAGAATAagGAGTGGAAGCGTTACAAGCAGTACACGAAGGAGCACATGGAAAAGGCGATTATAGCGGTGCAGGGTGGCGAGACGGCATTGAAAGCGTCCAAAGCGTATGGAATTCCATCTCGCACGCTTTACGACAAAGTGAAGAAAATGGGAATTACAACGCAGAGGAATATCCGACGCCACAGGACGACTAGTGGGGCTCACTTCCCCCACGGTATAGGAGGCAACAGGAACGGAAGTATCTACCGAGGCATGTCAGACCACGACACCGAGAACGATTACGGCAACAGTATGATGGAGAGCTCGGCGACTCTTCTGGATATAGCGTATGGGCACGGCCGCGAGCAGTCGGAGGATCAGGACGCGAGTCTGGACAATTCGCGACTAAGCACAAGTCCCGACGAGGAGCAACCGGAGGAAATGAAGTACGAGAATGACGATCACGTCCAGGATCTCTCGATTAATCGAAGAAATGTCATTGTTCCACCCGCTAATGCTCCAATAAAGGAAGAAAACAATGATGACGCCTCGAAGAACTGA
- Protein Sequence
- MEASSSEQHFCLRWNNHRTNLLTAFSELFHNGAFTDVELLVEGETSLVPFKCHKMVLAACSNYFQEIFSYTPTEQYPIIVLTNVREAEMKAILEFMYQGEVSVSQEEMTDIFKVARMLKIKGLVEYDKSHRRSVSPPPAISSTERSASFGNESLHNGYRSPPHSTSSSSFYPTYGKSPALVHNPAAHMAPAGWSPLASLSLAAQSVMNAPLTPRAAALFPGVYETEANHLRKQMNSLILNRDTPILRTVLGQGQADSSQGVPPIHGDGHDVYRSSSNGSAHDVGDDRKSSVDLSLSRNGNGHSPYATDISMDEFDKKSSGQQNRKNKEWKRYKQYTKEHMEKAIIAVQGGETALKASKAYGIPSRTLYDKVKKMGITTQRNIRRHRTTSGAHFPHGIGGNRNGSIYRGMSDHDTENDYGNSMMESSATLLDIAYGHGREQSEDQDASLDNSRLSTSPDEEQPEEMKYENDDHVQDLSINRRNVIVPPANAPIKEENNDDASKN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01273208; iTF_00438218; iTF_00438004; iTF_00438676; iTF_00438878; iTF_00728768; iTF_00728585;
- 90% Identity
- iTF_01273208;
- 80% Identity
- iTF_01273208;