Dlon000004.1
Basic Information
- Insect
- Diachasmimorpha longicaudata
- Gene Symbol
- bab1
- Assembly
- GCA_034640455.1
- Location
- CM067946.1:19344-21403[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.4e-10 1.9e-07 30.7 0.1 2 45 340 383 339 383 0.91
Sequence Information
- Coding Sequence
- ATGGAGGCATCCTCATCAGAGCAGCAATTCTGCCTGCGTTGGAACAATCACCGAAGAAACTTGTTAACAGCATTCAGCGAATTATTTCACAACGGTGCATTCACAGATGTGGAGCTCCTCGTGGAGGGTGAAACATCCCTGGTGCCCTTCAAATGCCATAAAATGGTCCTAGCAGCATGTTCAAACTACTTCCAAGAGATATTCTCGTATACCCCCACCGAGCAGTATCCAATAATTGTCCTCACAAACGTCCGCGAAGCGGAGATGAAGGCAATTCTAGAGTTCATGTATCAGGGAGAGATCAGCGTTTCCCAGGAGGAGATGACGGATATATTCAAGGTGGCTCGTCTGCTGAAGATCAAGGGTCTCGCTGAGTATGAAAAATCACATCATTCTCGTGGACATTCGGTGTCACCACCTCCCGCTATCAGCAGTACAGAGCGAATTGTCTCATTTGGCAATGAGAGTGTTCACAATGACTATCGTTCACCCCCGCATTCCACGAGTTCATCGTCATTTTACTCACCATATGGTAAAGCATCGGCTCTGGTACACAATCCGGCTGCTCACATTCCACCCACAGGATGGAGTCCACTGACGAGTCTCTCATTAGCCGCTCAAACGGTCATGAATACACCCTTGACACCTCGAGCTGCTGCACTCTTCCCGGGGGTCTACGAAACCGAGGCCAATCATCTCCGCAAACAGATGAGCAATTTGATGATGAATCGAGACACTCCGATACTGAGGACGGTCCTGGGACAGGGACAGGCGGACAGCTCGCAGGGGGTGCCGGTTATGCATGGCGATAGTCATGATGTTTATCGCAGCTCTAGCAATGGGTCTGCTCATGATGTGAGTGATGATCGAAAAGCCAGTGTGGATTTGTCACAGGCCCGGAGTAGCAATGGACACAGCCCCTACGCCACCGATATCTCGGTCGATGAGTTTGATAAGAAATCGTCGGGCCAACAAAATCGAAAGAACAAAGAGTGGAAGCGTTACAAGCAATACACGAAAGAGCACATGGAAAAGGCGATTATAGCAGTGCAGGGTGGTGAGACAGCTTTGAAAGCCTCCAAAGCGTACGGTATTCCCTCCCGCACGCTCTACGATAAAGTAAAGAAAATGGGAATCACAACCCAGAGGAATATTCGACGTCACAGGACAAGCAGTGGTGCTCACTTTCCCCATGGAATAGGTGGCAATAGAAATGGAAGTATTTACCGTGGTATGTCAGATCATGACACGGAGACCGATTATGGCAGAAGTATGATGGAGAGTTCTTCGGCTCTGTTGGACATGGCATATGGACACAGCCGTGAACAAACTGAGGATCCGGATGCGAGCTTGGACAATTCACGAATAAGTACGAGCCCCGATGAGGAGCATCGAGAGGAAATGAAGTATGACACTGACGATCACGTTCAGGATTTGTCGATAAACCGTAGAAATGTCATTGTCCCACCCTCAAATCTTTCCGTAAAGgaagaaaatgatgatgaCGCCTCGAAGAACTGA
- Protein Sequence
- MEASSSEQQFCLRWNNHRRNLLTAFSELFHNGAFTDVELLVEGETSLVPFKCHKMVLAACSNYFQEIFSYTPTEQYPIIVLTNVREAEMKAILEFMYQGEISVSQEEMTDIFKVARLLKIKGLAEYEKSHHSRGHSVSPPPAISSTERIVSFGNESVHNDYRSPPHSTSSSSFYSPYGKASALVHNPAAHIPPTGWSPLTSLSLAAQTVMNTPLTPRAAALFPGVYETEANHLRKQMSNLMMNRDTPILRTVLGQGQADSSQGVPVMHGDSHDVYRSSSNGSAHDVSDDRKASVDLSQARSSNGHSPYATDISVDEFDKKSSGQQNRKNKEWKRYKQYTKEHMEKAIIAVQGGETALKASKAYGIPSRTLYDKVKKMGITTQRNIRRHRTSSGAHFPHGIGGNRNGSIYRGMSDHDTETDYGRSMMESSSALLDMAYGHSREQTEDPDASLDNSRISTSPDEEHREEMKYDTDDHVQDLSINRRNVIVPPSNLSVKEENDDDASKN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01273018;
- 90% Identity
- iTF_00438878;
- 80% Identity
- iTF_00438878;