Ppal002098.1
Basic Information
- Insect
- Pseudomyrmex pallidus
- Gene Symbol
- dmd-4
- Assembly
- GCA_014825455.1
- Location
- QVNV01017744.1:33239-37008[+]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.8e-25 2.8e-21 75.4 11.3 1 47 25 71 25 71 0.99 2 2 0.12 8.6e+02 0.2 0.4 2 9 372 379 371 381 0.83
Sequence Information
- Coding Sequence
- ATGCTCCGCGGCAAGAGCAAGAACAGATCGGAGAACAGCGAGAACAACGAGGGAACGGACGGCAACAAACAACGTAGACCGAAATGCGCCCGTTGTAGGAATCACGGCCTGATCTCCTGGCTGCGGGGCCACAAACGAGAGTGTCATTATCGGGAATGTCTGTGCCCGAAGTGTTCGCTAATTGCCGAACGGCAGCGAGTGATGGCCGCACAGGTTGCTCTGAAAAGACAACAGGCGGCTGAAGACGCCATTGCTCTTAAAATGGCGAAGGTAGCGACCGGACAGAAGCTCGACCGACTTCCTCCCGGAAAGATATTCGGAATGTCCGTGACGGAACCGAAATCGACGGTGGAGCAGACTGAGGATGCGAAAAAAATGGACGGAATCTCGGAGGACTCGAAAGATCTTCCGCACTTGACGACCGTCAACAGCATTTTGCCCGCTCGTCTTCAAAACTGTTCTGACAGTTCGGATACCTGTTCGAAATCCAGAAGTCTCCTGTTCGACGCGAATAAGACGGACACTTCCAAGGAACTCGCTCCTCTCTCCGTCTCGCAAACTTCCGTGGAAACCCTAGCTCGTCTCTTTCCGAACACGAAGCTATCGGTTCTGCAACTGGTGTTGCAACGTTGCGGCCAGGATCTGCTGAAGGCGATCGAGTACTTCGCGAGCGACAGTCTGGGTATCGTCGAGCCTACGCTGGCGACCAGCATCGGTCACACATCGGCCTCGGCCTTTCGACCGCCGCAAACGGTCGCCGACAACGCCGTCGGAGAGCAACAGCAGCAACCGGTTTCCGGTCCGATGTTGGCACCGATCTACACCAGCCTGTCCAGGAACGTCTACGGGGACGCGGGTTACTATCTGCTGAACATCGTGCCGACCGAGCAATTCGCCAAGGGTGCCGATCTGTCACTAGCGAAAACCGCGACCGATCAGGACCCCATCGCTCTAAATTTCCGTTACAACAATTATTTCAATCCCGGCGTGCAGCAACAACTGAGGGATGCGCACGTGTGCGCTCAGGTGGCGGCAGATCGGCTGTCGGCCGCCAGATCGGCGGGCATTCTTCATCATCTGCCGCCCGCGGTGTTACCGAGCATACCCTGCGTGCAGCCGAATTGCGCGCAATGTAACTACAAATTCGCGTGA
- Protein Sequence
- MLRGKSKNRSENSENNEGTDGNKQRRPKCARCRNHGLISWLRGHKRECHYRECLCPKCSLIAERQRVMAAQVALKRQQAAEDAIALKMAKVATGQKLDRLPPGKIFGMSVTEPKSTVEQTEDAKKMDGISEDSKDLPHLTTVNSILPARLQNCSDSSDTCSKSRSLLFDANKTDTSKELAPLSVSQTSVETLARLFPNTKLSVLQLVLQRCGQDLLKAIEYFASDSLGIVEPTLATSIGHTSASAFRPPQTVADNAVGEQQQQPVSGPMLAPIYTSLSRNVYGDAGYYLLNIVPTEQFAKGADLSLAKTATDQDPIALNFRYNNYFNPGVQQQLRDAHVCAQVAADRLSAARSAGILHHLPPAVLPSIPCVQPNCAQCNYKFA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01476936;
- 90% Identity
- iTF_01266907;
- 80% Identity
- -