Pcoc020320.1
Basic Information
- Insect
- Pseudomyrmex concolor
- Gene Symbol
- dmd-4
- Assembly
- GCA_014839585.1
- Location
- QVOB01015298.1:10446-14172[+]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.8e-25 3e-21 75.4 11.3 1 47 24 70 24 70 0.99 2 2 0.12 9.3e+02 0.2 0.4 2 9 370 377 369 379 0.83
Sequence Information
- Coding Sequence
- ATGCTCCGCGGCAAGAGCAAGAACAGATCGGAGAACAGCGAGAGTAATGAGGAAACGGACGGCAAACAACGTAGACCGAAATGCGCCCGTTGTAGGAATCACGGCCTGATCTCCTGGCTGCGCGGCCACAAACGAGAGTGTCATTATCGGGAATGTCTGTGCCCGAAGTGTTCGCTAATTGCCGAACGGCAGCGAGTGATGGCCGCACAGGTTGCTCTGAAAAGACAACAGGCGGCTGAAGACGCCATTGCTCTTAAAATGGCGAAGGTAGCGACCGGACAGAAGCTCGACCGACTTCCTCCCGGAAAGATTTTCGGGATGTCCGTGACGGAACCGAAATCGACGGTGGAGCAGACTGAGGATGCGAAAAAGATCGACGAAATCTCGGAGGACCCGAAAGATCTTCCGCACTTGACGACTGTCAACAGCATTTTGCCTTCTCGTCTTCAAAACTGTTCTGACAGTTCGGATAGCTGTTCAAGATCCAGAAGTCTTCTGTTCGACGCGAATAAGATGGACACTTCCAAGGAAGTCGCTCCTTCCGTCTCGCAAACTTCCGTGGAAACCCTAGCTCGTCTTTTTCCGAACACGAAGCTATCGGTTCTCCAACTGGTGTTACAACGTTGCGGCCAGGATCTGTTGAAGGCGATCGAGTACTTCGCGAGCGACAGTCTGGGTATCGTCGAGCCGACCAGCATCGGTCACACATCGGCCTCGGCCTTTCGACCGCCGCAAACGATCGCCGACAACGCCGTCGGAGAGCAACAGCCGCAACAGCAGCAACCGGTTTCCGGCCCGATGTTGGCACCGATCTACACCAGCCTGTCCAGGAACGTTTACGGGGACGCAGGCTACTATCTGCTGAACATCGTGCCAACCGAGCAATTCGCCAAGAGTGCCGATCTGCCACTAGCGAAAACCACGACCGATCAGGATCCCATTGCTTTAAATTTTCGTTACAATAATTATTTTAATCCCGGGGTGCAGCAGCAATTGAGGGATGCGCACGTGTGCGCTCAGGTGGCGGCAGATCGGCTGTCGGCCGCCAGATCGGCGGGCATCCTTCATCATCTGCCGCCCGCGGTGTTACCGAACATACCCTGCGTGCAGCCAAATTGCGCGCAATGTAACTACAAGTTCGCGTGA
- Protein Sequence
- MLRGKSKNRSENSESNEETDGKQRRPKCARCRNHGLISWLRGHKRECHYRECLCPKCSLIAERQRVMAAQVALKRQQAAEDAIALKMAKVATGQKLDRLPPGKIFGMSVTEPKSTVEQTEDAKKIDEISEDPKDLPHLTTVNSILPSRLQNCSDSSDSCSRSRSLLFDANKMDTSKEVAPSVSQTSVETLARLFPNTKLSVLQLVLQRCGQDLLKAIEYFASDSLGIVEPTSIGHTSASAFRPPQTIADNAVGEQQPQQQQPVSGPMLAPIYTSLSRNVYGDAGYYLLNIVPTEQFAKSADLPLAKTTTDQDPIALNFRYNNYFNPGVQQQLRDAHVCAQVAADRLSAARSAGILHHLPPAVLPNIPCVQPNCAQCNYKFA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01476936;
- 90% Identity
- iTF_01267587; iTF_01268296; iTF_01269083; iTF_01270519; iTF_01269822; iTF_01271238;
- 80% Identity
- -