Pgra006696.1
Basic Information
- Insect
- Pseudomyrmex gracilis
- Gene Symbol
- pnr
- Assembly
- GCA_002006095.1
- Location
- NW:17487-24075[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.23 3.5e+02 0.2 0.1 2 20 230 253 230 255 0.72 2 2 2.2e-16 3.4e-13 48.2 3.7 1 34 422 454 422 456 0.97
Sequence Information
- Coding Sequence
- ATGTTCGACGTACCGCAGAAGTTCTACGAGCTGTGTCGCCTTTGTTTATCCCAGGATGGTGGCAAGTTGTCCATATTCGAGGATGAGGGCACCGAGCGTAACTTCGCCGCGAAGATACACGCGTGCCTGTCAATCACGGTAAAACATGGCGATTCCTTGCCGCCAATTATCTGTCACCGGTGTGTACACAAGTTGGACGAGCTGCACAATTTTCGTAAAGCGTCACAAAACGCTGACACTGTACTTAAAGAGTACCTGAATCGTGCCAAGCAACTTGCGTCTTCTAATGAGagAGAGTCTTTCTCCACTGCCAAAACGGGTGACGATAGTGTCATGCAATCGATCCGCAAATTGGACAGAATACTGTTCAATGAGGAACTCAACTCCGAGCCCGCCAGcattaatcaaaatataataccTCAGACTCAAACGCTTCACCTAGAGATGCAAAACAGCGACATGACGGAGCATGATAATATTAAGTGCGAGCCGGAGGACGATACGTGTTCCAACAGTACGGATCCTGAGCGATTGGAAATTGAGGATCGCGACGATCAGGAGATCGAGGGCGAGGAGAACGGTTACGACATGACCGtcaataagaaaattaaactaGAGAACAGTTACGACGGCTCCAAGTCCAACACGGGAAATTGCAGTCCAGTCAACAGAATGGACACTCCGGAAAGTAATTGTTCGGATACCAACATTGATCAGGAAACGACAAAGCTGTGGCAAGCTCTAGCCAACAGTAATAGTAGCCTGGAAATCACAAGAACGAACGGTGATAAAATGAACAATGGATTCGCCGGTGAAGCGACCAATCTGTTACGCTCTCTCATCAACAATAGGCAGATCGGCATTACTACGGTCGATTCAGATAGGATATCTCCCCAAATCAGATTCTACAGGGACACTCAAGGGACGACCAATGAGCACACCTTGAGCGATTTTTCTATGCATGGTAATCGCACGAACATACCATCGTTGGAGAATAAGAATGTCTCAATGGACAGCAATCCATCTAGCCCCGCGAGTATCGGTCGCAAGGAAATGGCATCAACGACAAAAGGCCGTAGAAAGCAGAGTTATCCCAGTAAGGCTCCAACGAGTCCGGATGTTGTCACGAATTACCATCATGAGAATACCGACGACGAGCAAGCGCATGACTTTACGACATGgtcgaataaaataaagattaagATGGACGATCAGAAGCAACAGCTCGATCAACAAAGCAGCAACAAGAGGATCGACATGACATGTTCAAATTGCGGCACCATGACAACAACAATTTGGAGACGAAACGTCAAAGGCGAGATGGTGTGCAATGCCTGCGGTCTGTATTATAAACTTCACGGCATTAATCGTCCCGTCACCATGAGAAGGGACACTATACATACGCGCAGACGTAGACCCAAAGGCGAGAAGCCAACAAGGCACAGAAAAAAAGGAGACGCGGTCTTATCGTCTCAGTCAACGACAGGAGAATTGGATGCCGACAGCGCGGACATGCTGGCGGCTCTTCGACGACAAATTCAGCCTCATCTAATGATGGCAGCTTTGAGACCCACGCACATAACTAATGCGCATACTCATCCGCCTCCACCTGCCGCTTACTCAATACCATCCTTGCCTAGTTACTTGCTCCAGCAACATGTAAAAACCGAAGATCGTGTGCAGCGACAGATGTCCGTGGACGCCGAAGAGGCAGACGAGGGCGACGAGGAGAACATTTCCGACGTTCCCCTGAATTTGGTAGCGACTTCTCTTTCGGAGGAAACGCACTGA
- Protein Sequence
- MFDVPQKFYELCRLCLSQDGGKLSIFEDEGTERNFAAKIHACLSITVKHGDSLPPIICHRCVHKLDELHNFRKASQNADTVLKEYLNRAKQLASSNERESFSTAKTGDDSVMQSIRKLDRILFNEELNSEPASINQNIIPQTQTLHLEMQNSDMTEHDNIKCEPEDDTCSNSTDPERLEIEDRDDQEIEGEENGYDMTVNKKIKLENSYDGSKSNTGNCSPVNRMDTPESNCSDTNIDQETTKLWQALANSNSSLEITRTNGDKMNNGFAGEATNLLRSLINNRQIGITTVDSDRISPQIRFYRDTQGTTNEHTLSDFSMHGNRTNIPSLENKNVSMDSNPSSPASIGRKEMASTTKGRRKQSYPSKAPTSPDVVTNYHHENTDDEQAHDFTTWSNKIKIKMDDQKQQLDQQSSNKRIDMTCSNCGTMTTTIWRRNVKGEMVCNACGLYYKLHGINRPVTMRRDTIHTRRRRPKGEKPTRHRKKGDAVLSSQSTTGELDADSADMLAALRRQIQPHLMMAALRPTHITNAHTHPPPPAAYSIPSLPSYLLQQHVKTEDRVQRQMSVDAEEADEGDEENISDVPLNLVATSLSEETH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01267947; iTF_01271623; iTF_01270189; iTF_01267224; iTF_01269472; iTF_01268669;
- 90% Identity
- iTF_01270189;
- 80% Identity
- -