Pelo021759.1
Basic Information
- Insect
- Pseudomyrmex elongatus
- Gene Symbol
- pnr_2
- Assembly
- GCA_014825605.1
- Location
- QVNY01010620.1:48282-52873[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1 4e+03 -1.1 0.1 2 12 178 193 178 200 0.77 2 2 3.6e-16 1.4e-12 48.4 3.7 1 34 369 401 369 403 0.97
Sequence Information
- Coding Sequence
- ATGTTCGACGTACCGCCGAAGTTCTACGAGCTGTGTCGCCTTTGTTTATCCCAGGATGGTGGCAAGTTATCCATATTCGAGGAGGAGGGCACCGAGCAGTACCTGAATCGTGCCAAGCAACTTGCGTCTTCTGATGAGAGAGAGTCTTTCTCCACTGCCAAAACGGGGGACGAGAATGTAATGCAATTCCTCAAATTGAACAAAATGCTGTTTAATGAGGAACTCAACTCCGAGCCCGCCAGCATTAATCAAAATATAATACCTCAGACTCAAACGCTTCACCTAGAGATGCAAAACAGCGACATAACGGAGCATGATAATATTAAGGGCGAGCCGGAGGACGATACGTATTCCAACAGTACGGATCCTGAGCGATTGGAGATTGAGGATCGCGATGAGCAGGAGATCGAGGGCGAGGAAAACGGTTACGACATGACCGTCAATAAGAAAATTAAACTAGAGAACAGTTACGACGGCTCCAAATCCAACACGGGAAATTGCAGTCCAGTCAACAGAATGGACACTCCGGAAAGTAATTGTTCGGACACCAACATCGATCAGGAAACGACAAAGCTGTGGCAGGCTCTAGCCAGCAATGCTAGCCTGGAAATCACAAAAACGAACGGTGATAAAATGAACAATGGATTCGCCGGTGAAGCGGGCAATCTGTTACGCTCTCTCATCAACAATAGGCAGATCGGAATTACTACAATTGATTCCGATAGAATATCTCCGCAAATCAGATTCTACAGGGACACTCAAGGGACGACCAATGAGCACATCTTGAGCGATTTTTCTATGCATGGTAATCGCACGAACATGCCAACGTTGGAGAATAAGAATGTTTCGATGGACAGCAATCCATCTAGCCCCGCGAGTATCGGTCGCAAGGAAATGGCGTCAACGACGAAGGGCCGTAGAAAGCAGAGTTATCCCAGTAAAGCTCCAACGAGTCCGGATGTTGTCACGAATTACCATCATGAGAATACCGACGACGAGCAAGCGCATGACTTTACGACATGGTCAAACAAGATAAAGATCAAGATGGACGATCAGAAGCAACAGCTCGATCAACAGAGCAGCAACAAGAGGATCGACATGACATGTTCGAATTGCGGCACGATGACAACAACAATTTGGAGACGAAACGTCAAAGGCGAGATGGTGTGCAATGCCTGCGGTCTGTATTATAAACTTCACGGCATTAACCGTCCTGTCACTATGAGAAGGGACACTATACATACGCGCAGACGTAGACCCAAAGGCGAGAAGCCAACGAGGCACAGAAAAAAAGGAGACGCGATCTTATCGTCTCAATCAGCGCCAGGAGAATTGGATGCCGATAGCGCGGACATGCTGGCGGCTCTTCGACGACAAATTCAACCTCATCTAATGATGGCAGCGTTGGCACCCACGCACATAACTAATGCGCATACTCATCCGCCTCCACCTGCCGCTTACTCAATACCATCCTTGCCTAGTTATTTGCTCCAGCAACATGTAAAAACCGAGGATCGTGTGCAGCGACAGATGTCCGTGGACGCCGAAGAGGCAGACGAGGGCGACGAGGAGAACATTTCCGACGTTCCCCTGAATTTGGTAGCGACTTCTCTTTCGGAGGAAACGCACTGA
- Protein Sequence
- MFDVPPKFYELCRLCLSQDGGKLSIFEEEGTEQYLNRAKQLASSDERESFSTAKTGDENVMQFLKLNKMLFNEELNSEPASINQNIIPQTQTLHLEMQNSDITEHDNIKGEPEDDTYSNSTDPERLEIEDRDEQEIEGEENGYDMTVNKKIKLENSYDGSKSNTGNCSPVNRMDTPESNCSDTNIDQETTKLWQALASNASLEITKTNGDKMNNGFAGEAGNLLRSLINNRQIGITTIDSDRISPQIRFYRDTQGTTNEHILSDFSMHGNRTNMPTLENKNVSMDSNPSSPASIGRKEMASTTKGRRKQSYPSKAPTSPDVVTNYHHENTDDEQAHDFTTWSNKIKIKMDDQKQQLDQQSSNKRIDMTCSNCGTMTTTIWRRNVKGEMVCNACGLYYKLHGINRPVTMRRDTIHTRRRRPKGEKPTRHRKKGDAILSSQSAPGELDADSADMLAALRRQIQPHLMMAALAPTHITNAHTHPPPPAAYSIPSLPSYLLQQHVKTEDRVQRQMSVDAEEADEGDEENISDVPLNLVATSLSEETH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01270873;
- 90% Identity
- iTF_01267947;
- 80% Identity
- -