Ppal009869.1
Basic Information
- Insect
- Pseudomyrmex pallidus
- Gene Symbol
- pnr
- Assembly
- GCA_014825455.1
- Location
- QVNV01019147.1:24206-28990[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.47 1.3e+03 -0.6 0.2 2 14 229 246 229 253 0.71 2 2 2.5e-16 6.8e-13 48.3 3.7 1 34 420 452 420 454 0.97
Sequence Information
- Coding Sequence
- ATGTTCGACGTACCGCAGAAATTCTACGAGCTGTGTCGCCTTTGTTTATCCCAGGATGGTGGCAAGTTGTCCATATTCGAGGAGGAGGGCACCGAGCGTAACTTCGCCGCGAAGATACACGCGTGCCTGTCAATCACGGTAAAACATGGTGATTCCTTGCCACCAATTATCTGTCATCGGTGTGTACACAAGTTGGACGAGCTGCACAATTTTCGTAAAGCGTCGCAAAACGCTGACACTGTACTTAAAGAGTACCTGAATCGTGCCAAGCAACTTGCGTCTTCTGATGAGAGAGAGTCTTTCTCCACTGCCAAAACGGGGGACGAGAATGTTATGCAATTCCTCAAATTGAACAAAATGCTGTTCAATGAGGAACTCAACTCCGAGCCCGCCAGCATTAATCAAAATATAATACCTCAGACTCAAACGCTTCACCTAGAGATGCAAAACAGCGACATAACGGAGCATGATAATATTAAGTGCGAGCCGGAGGACGATACGTGTTCCAACAGTACGGATCCTGAGCGATTGGAGATTGAGGATCGCGACGAGCAGGAGATCGAGGGCGAGGAAAACGGTTACGACATGACCGTCAATAAGAAAATTAAACTAGAGAACAGTTACGACGGCTCCAAGTCCAACACGGGAAATTGCAGTCCGGTCAACAGAATGGACACTCCGGAAAGTAATTGTTCGGATACCAACATCGATCAGGAAACGACAAAGCTGTGGCAAGCTCTAGCCAACAATACTAGCCTGGAAATCACAAGAACGAACGGTGATAAAATGAACAATGGATTCGCCGGTGAAGCGACCAATCTGTTACGCTCTCTCATCAACAATAGGCAGATCGGCATTACTACAGTCGATTCAGATAGGATATCTCCTCAAATCAGATTCTACAGGGACACTCAAGGGACGACCAATGAGCACATCTTGAGCGATTTTTCTATGCATGGTAATCGCACGAACATGGCAACGTTGGAGAATAAGAATGTTTCGATGGACAGCAATCCATCTAGCCCCGCGAGTATCGGTCGCAAGGAAATGGCGTCAACGACGAAGGGCCGTAGAAAGCAGAGTTATCCCAGTAAGGCTCCAACGAGTCCGGATGTTGTCACGAATTACCATCATGAGAATACCGACGACGAGCAAGCGCATGACTTTACGACATGGTCAAACAAGATAAAGATCAAGATGGACGATCAGAAGCAACAGCTCGATCAACAGAGCAGCAACAAGAGGATCGACATGACATGTTCGAATTGCGGCACGATGACAACAACAATTTGGAGACGAAACGTCAAAGGCGAGATGGTGTGCAATGCCTGCGGTCTGTATTATAAACTTCACGGCATTAACCGTCCTGTCACTATGAGAAGGGACACTATACATACGCGCAGACGTAGACCCAAAGGCGAGAAGCCAACGAGGCACAGAAAAAAAGGAGACGCGGTCTTATCGTCTCAATCAGCGCCAGGAGAATTTGATGCCGATAGCGCGGACATGCTGGCGGCTCTTCGACGACAAATTCAGCCTCATTTAATAATGGCAGCGATGGCACCCACGCACATAACTAATGCGCATACTCATCCGCCTCCACCTACCACTTACTCAATACCATCTTTGCCTAGTTATTTGCTCCAGCAACATGTAAAAACTGAGGATCGTGTGCGACAGATGTCCGTGGACGCCGAAGAGGCAGACGATGGCGACGAGGAGAACATTTCCGACGTTCCCCTGAATTTGGTAGCGACTTCTCTTTCGGAGGAAACGCACTGA
- Protein Sequence
- MFDVPQKFYELCRLCLSQDGGKLSIFEEEGTERNFAAKIHACLSITVKHGDSLPPIICHRCVHKLDELHNFRKASQNADTVLKEYLNRAKQLASSDERESFSTAKTGDENVMQFLKLNKMLFNEELNSEPASINQNIIPQTQTLHLEMQNSDITEHDNIKCEPEDDTCSNSTDPERLEIEDRDEQEIEGEENGYDMTVNKKIKLENSYDGSKSNTGNCSPVNRMDTPESNCSDTNIDQETTKLWQALANNTSLEITRTNGDKMNNGFAGEATNLLRSLINNRQIGITTVDSDRISPQIRFYRDTQGTTNEHILSDFSMHGNRTNMATLENKNVSMDSNPSSPASIGRKEMASTTKGRRKQSYPSKAPTSPDVVTNYHHENTDDEQAHDFTTWSNKIKIKMDDQKQQLDQQSSNKRIDMTCSNCGTMTTTIWRRNVKGEMVCNACGLYYKLHGINRPVTMRRDTIHTRRRRPKGEKPTRHRKKGDAVLSSQSAPGEFDADSADMLAALRRQIQPHLIMAAMAPTHITNAHTHPPPPTTYSIPSLPSYLLQQHVKTEDRVRQMSVDAEEADDGDEENISDVPLNLVATSLSEETH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01270873;
- 90% Identity
- iTF_01270189;
- 80% Identity
- -