Basic Information

Insect: Pseudomyrmex gracilis
Gene Symbol: JARID2
Assembly: GCA_002006095.1
Location: NW:66695-75183[+]

Transcription Factor Domain

TF Family: ARID
Domain: ARID domain
PFAM: PF01388
TF Group: Helix-turn-helix
Description: This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 5.1e-23 7.8e-20 70.4 0.0 6 89 1391 1472 1387 1472 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	5.1e-23	7.8e-20	70.4	0.0	6	89	1391	1472	1387	1472	0.94

Sequence Information

Coding Sequence: ATGGTCTTAAGTCGCAACGacaagaggaagaagagagaaggagatcTGGTCGACCTTATGGACCCGCTTGCAGAATCTCCGAAAAGGACCAAAGTTCACGCACAAAGAAAGTTTGCACAAGGTGCAACTACAGTGTTCAATACATCACCTACACCGGTCAAGGACAAAGAAAAAGCCAAACCTGCCAAGATTACCGAATTAATAACCCATAAACGTCCAAATACGGAAgattttctaacatttttaTGCTTTAGAGGAACACCCATTTTACCACCTAgcctaaatttctttaatctcagcgtcaaaaaagaaaaagagaaatcagAACCTAAACCATTGCCCACTCCTGCGGACAAGGTGTCATCTTCCACTAGTGTTTCGGCAGAgccacaacaacaacaaaaacaagacACGAGTCAAAAGAGCGTGACAAAAGTAAAGCCTGTTGTGTCAGACAAGAAGAAGATACCCGATACAATACACAAAACCATTACCAAACTCAAGACAGCAACGTCAACAGTTCAGGCGctcaaaaagaaatatcaggAGCAACGTTTGGCCAAgcagagaataaaaaataaattcataacTACTTGCGTTATGAGAACCAGATCTTCAGAGAGGAGTATGTTGAAGGCCAGTATTCAATTGGCGCCGAGAAAATTCCTGCCTAGAATTAAGACCAAACGGCACGGGCTGAGAAGCGGCGTGCTGCCTGGCAAGACTAACAAATCATTGCCGAAGACAAAAGTTGCGCCGCCACCCAAACCAAAGAAGAAAGTCACGTTAAGGCCGAAAGGTAGCGATACATCGAACACGGATATGTCGtcggaagaggaagagaacgGGAAGGAGGACAACGAGGAAGAGGAGTTACCTACGGAGAAGTCGACGTCCCAGATAAAGCGCAACGTACAGAGAACTACTCGAAAGAAAATCTGTACCAGAAGCAAGTCGGAGATGCGTAGAGTCACGAGATCGTGCAGCAGCACTCCGCGCGGCGTCTCCACGCAGAATCTCTCCAGAAGACCCACCAGAAAGACGAAAGAAGCGGCCGCTGTGTACATGGAGCTCCTCGGACGAAAACTGGTTAGTCCGGATTTAGaaaacgacgacaacgatTCGGTCGAGAGTTTTCCCGAATTGCCGAGTGCCCGTAGAATAACGCAAACGGAGAACGAGCTCAAAGCCAAGGTGAAACAAATGCCGACTGTTAGCACACGAGCGACTGTTAGCAAAAGTAAGGATTCCAAGATCAGCTCCTTTGCCGGTAACAAGCGATTGGATAAAAGCAAGAACACATTGATTTTGAGAAGCAAACGTCTGATAAGAATGCGGAGATATCGCGAAGACGAAAGCGACGAGGAATCCGAGACCTCGGTAGAAACGAATCAGACGAGACCCATCACCAGACAGAGTCTCGGCAAACTCGATAAACCGATCAGCAGGAGTCTCAGATCGTCCACTAAGAACACACCGGTACTGATGGAAGTGCAAACTAACAACAAACCGAAGACTCAGGTTCAGACTTGCGTGAAAACCGCTCGGGAAAAATTTATGTTGAAACGCAAATACAATCAAAATGTATCAAAAGCGTCGTCAGATAAGACCGTCGTCGAATCGAAACAGAAAATTGTCAAAGGCAATCGAAACGATCACACGGAATCCGAGGAGGAAACGCTAGGAATGTTGctaaagaaaatcaaaaaaaagaaagaagatgaCGAAGACGAAGGAGAACATGTTTCTGACAATGTTGACAAGGCGAAAGATAGCGAGACGGCGCACAAAGAAGCGCAAATCACGAAAGAGTCGGACTTGGCGAAGGAATCGGACGACGAGGAAGAATCTTTTCGCGGATTCACAAAGAAGGCGATATCGAAGGGTTTGAACTCGTGTCAGACGCACGCTAACGTCAACCTGTTAACTCCGGAAACCGACGACAAGAGTCTCAAGACGTTGCCGGACGTGCCGGAAACGACGGAAACGACGAATTCGCAAGAGATAAAAGAGGAAGCGTCACCGGTCAAGGAAACCGAGTCCTCTCCGATCGTTAATTTGAACACCGAATACAACATGTCTATACTGGATGAGAAATCGATACCGGACATGTCCATTGACACGAAACACTCATCGCTTCCGCCCACGGAACAAACGAGCAAGAACGTGTGCAAGCACGAGGACGAAATTTCTTCAAATCTTATAAACATGCCGCTGTCGACGCTGCGTACGAGAAAGGAACGAGTAAACATGTCGACCGAACAGATCGAAAAATGGCTGAACGAGAGTTCCCTCGCCAAAGAGGAGAGTAAGTTGGAGATGGAGAACGTTTCCACGTTCAGATACGATCCCACGGAAAGATTGAAGGACGTCTCGCACTTGTCCATCTCGACGAAGATCCAGCATTTGGTGCGTCCCGTAAACGTAACGCTCTTAAAATTACCCTCAGATAAAAGCGTGAGGGACCGTTTGGGAACAATGCACAACAGAAATTTGATAACCGCGCCATCCGACGCGCATAATATCGACGTGAAACTCGAAAACACGATTACTTTGGATAAAACCAAGATCGTTACCGAACCGAAAGAAATAATCAAGAACAAGTACGAGAAGATAAATAAAGATGTTTCTATCACCGAGGACACCAACGACACCATGTCGAAGTCGGATCAGAACTCGATGGACGGATCCGTGGAGAAGAAGTCGCCggagaaaaagatatttcaacCGCGAAAGCCGTTTCTGTCTAAGGTTAAGGAACGTAAGATTGTGACTCCGAACGTGAATGCGTTTTCTCCGGAGAACGAGAGCAGCGTTTACGCGTTTGAGAGCGATACCGAAGTGCCTATTAGTACACCGTTTAGGAGAAAGAGTAAAGATACTGCCAAGGATATCGCTAGATCGACCAGCACTCCTACCGCAATAACTACTTTTACTGCGACTTCCACAGCATCCGAGGCTAAACTAATTGCTGATACCAACAAGACGGATATTAAGGACAATTCCGAGACAATGGACAGCAAGGACAAACTTTCCGGTGATGTTGTTATGCGCGCACCGACGTGCGAGAAGAGACAACAAGAGACGCAAGCGCTAGTGAATACGGCGGCACCGACTCAGTTGGAGCTCGAAACAAAAGCAACTCCGACTTCGAACAAGTTCGAGTTGCCGAAACATTTCGCGAATTTAACTACCGTACAGGTGTTACCGCTCGATAAGCTCACGACCAGTTGGAGCAACGTAAACTGCAGCGCTTCCATAGCGGTGCAGGTGAATCTCGACGAGACGACGCAGGAACCGGAGATCAACGACGCGGCGAATCCACAGAAGAGCACCGAAATATCGACTCAAACCGAAACGAATAACGAGAACGATGACGACAACGACGGGCAATTGTTTTACATTCCGTTACAGCCTATTCGGAGCGGACCGAATTTGGTTCAGGGGCAACAGCTGATTCAAGGCGTGGCCGTTAAACTTACGGAAGGACCGACCGGACCTAATCAGAGGGTGCTTCTTCACGCTAAATTGGTCACTAAGCCACCCTTGTCCGTGGCGCGTTGTCCTCCGATAGGAACCGTGCAACCGACAACGCGACCTCCGCCCAATCCTATCGCGATCACGATGGAACAACAAGTGCCGTCGACCTCGACGACCACGACCGTATCCACCTCGGTAGCGAATATGCCGAGCGCGGAAACAACGCCACAACCAATATCACCGGTGAAGAATGACGTTGCCCTGAATCGTCCGAACGTTAGTACGAGCACGAGCAATGTTCTGGAAAAACTCACGAAATCTCCAAAGTCAgccagagaaagaaaaacctcCATAGATTCGGCAAAAAGTGGAAAGAGAACGCAAGTGAAGCAAAGCAAACAGAAAGGGTTACACTCCTCCAGCAACACTACATTCCCAAGTATGAAAACCTTAGACGACGAAGCTCGCGTGGTCGAAGCGCCGACGTTTCATCCGACTGAAAAAGATTTTCAGGATCCTTTGGAATACATAGACAAGATAAAGTCGGTCGCTGAAAAATTCGGCATTTGCAAAGTCGTGCCTCCGTCGAATTTCAAACCAGAATGCAAGGTGTCTGATGATATGAGATTCACTGCTTACAATCAATACGTGCACCGCATGCTTCACAGATGGGGTCCTAACGTGAAGGAAATGATGgctatcaaaaaatatttagctACTCAAAGTATCACTTTGACTCAACCGCCATGgattggCGGGATGGAAGTTGATTTACCTCACTTGTACCAAACAGTTCAAAGCTTAGGCGGATTGAAAGAagttatagaaaaaaagaaatggcAGAAAGTGGCAGATGGTATGAAGATACCAAAATCTGCGCAGGATCGCGTTACTAAACTAGacgatatttattgtaaatatttgctGCCGTACGATACACTATCTCCAGAGGAACGCGGAAAATTGTTCGACGAAGTCGAAACCGAATggttgaagaagaaaaataaagctTTGCAGAGGCAACAGACACCAACCAACGACAAtgacgaagacgacgaagaTGACAGTTCCGACGAAATCGAGGAATGTATCGTAAAGGGAAGGAACATGCCTCTGAACGCTTTTTACCGAATCGCTCGTAACACGCAACGTATGTGGTTCGGCGAAAATCAACGGGGAAACGAGGCCGAAGGTGCTTCCGCGGACGAAGTGGAGAGTGCATTTTGGAAACACGTCGCCGAAAGGAAACGTCACGTTTGCGTTCACGCGGCGAGCATCGATTCGAGCGGCCGTGGATTCGGCTTTTCCGTTGCCAAAAACAGTCCGTTCGCCAGGCATTCGTGGAATCTCAAAGTGCTCACCAACAACGCTGGATCAGTACTGAGAGCCTTGGGTCCTTTAATGGGTGTGACCATACCAACGCTCCACGTGGGCATGTTGTTCAGCGCTTGCTGCTGGTACCGCGATCCTCACGGTCTACCGTGGATAGAGTATCTTCATACGGGCGCGAAAAAGATCTGGTACGGTATACCGGACAAGCATAACAACAGTTTCCGAGAAGCGCTCACAAAAATGGTGCCGCAGTACTGCAAAAATAAGACCATATGGTTATCGTCCGACACTGCCATGGTTCCCCCGGAATTATTAGTGAGCAACGGTGTGCCGTTGTGCCGCACCGTGCAAGAACCGGGACAGTTCATAATCGTGTTTCCGAAAGCGTTCACGTCGAGCATATGCACCGGTTACGTCGTGTCCGAGAGTGTGTACTTCGCGCAACCATCTTGGCTAGAAACTGCCGAGCAAGTATTTAAAGACATACAAGACAGTTGCGAACCTTCTATCTTCTCGTTCGAGAGATTACtgtttaatattatcaacGATACAAGGTCTCACGTAGACATATTGAAACAGataCTACCAAGTGTGATAAAGATTCGTCTGAAGGAGTTGGATTATCGTAAACAACTGACAAACGTAGGTCTTgccaagagagaaagattacCACTGCCAAATAGCgggaagggaaagagagggaaaaaggTGAAGGAAGACGACGGTGATTTTGAATGCGAATCGTGTAGAGCTAACTTGTTTGTTTCGTTGGTGAACAATTCGCAAGACGACAGCGTTTATTGTCTACCGCATGGGTTGCAGTTAATCAATCGTAAAAAGCAAGTTTTGAAACATTGCACTCTCATGTACACGTACGACGAGGACGAATTAGATGAATTGATTCACAAACTGGAAAACAGGATCGAAGCCAAATCTAAGAAAActaatcaaataaaacaagctaagtaa
Protein Sequence: MVLSRNDKRKKREGDLVDLMDPLAESPKRTKVHAQRKFAQGATTVFNTSPTPVKDKEKAKPAKITELITHKRPNTEDFLTFLCFRGTPILPPSLNFFNLSVKKEKEKSEPKPLPTPADKVSSSTSVSAEPQQQQKQDTSQKSVTKVKPVVSDKKKIPDTIHKTITKLKTATSTVQALKKKYQEQRLAKQRIKNKFITTCVMRTRSSERSMLKASIQLAPRKFLPRIKTKRHGLRSGVLPGKTNKSLPKTKVAPPPKPKKKVTLRPKGSDTSNTDMSSEEEENGKEDNEEEELPTEKSTSQIKRNVQRTTRKKICTRSKSEMRRVTRSCSSTPRGVSTQNLSRRPTRKTKEAAAVYMELLGRKLVSPDLENDDNDSVESFPELPSARRITQTENELKAKVKQMPTVSTRATVSKSKDSKISSFAGNKRLDKSKNTLILRSKRLIRMRRYREDESDEESETSVETNQTRPITRQSLGKLDKPISRSLRSSTKNTPVLMEVQTNNKPKTQVQTCVKTAREKFMLKRKYNQNVSKASSDKTVVESKQKIVKGNRNDHTESEEETLGMLLKKIKKKKEDDEDEGEHVSDNVDKAKDSETAHKEAQITKESDLAKESDDEEESFRGFTKKAISKGLNSCQTHANVNLLTPETDDKSLKTLPDVPETTETTNSQEIKEEASPVKETESSPIVNLNTEYNMSILDEKSIPDMSIDTKHSSLPPTEQTSKNVCKHEDEISSNLINMPLSTLRTRKERVNMSTEQIEKWLNESSLAKEESKLEMENVSTFRYDPTERLKDVSHLSISTKIQHLVRPVNVTLLKLPSDKSVRDRLGTMHNRNLITAPSDAHNIDVKLENTITLDKTKIVTEPKEIIKNKYEKINKDVSITEDTNDTMSKSDQNSMDGSVEKKSPEKKIFQPRKPFLSKVKERKIVTPNVNAFSPENESSVYAFESDTEVPISTPFRRKSKDTAKDIARSTSTPTAITTFTATSTASEAKLIADTNKTDIKDNSETMDSKDKLSGDVVMRAPTCEKRQQETQALVNTAAPTQLELETKATPTSNKFELPKHFANLTTVQVLPLDKLTTSWSNVNCSASIAVQVNLDETTQEPEINDAANPQKSTEISTQTETNNENDDDNDGQLFYIPLQPIRSGPNLVQGQQLIQGVAVKLTEGPTGPNQRVLLHAKLVTKPPLSVARCPPIGTVQPTTRPPPNPIAITMEQQVPSTSTTTTVSTSVANMPSAETTPQPISPVKNDVALNRPNVSTSTSNVLEKLTKSPKSARERKTSIDSAKSGKRTQVKQSKQKGLHSSSNTTFPSMKTLDDEARVVEAPTFHPTEKDFQDPLEYIDKIKSVAEKFGICKVVPPSNFKPECKVSDDMRFTAYNQYVHRMLHRWGPNVKEMMAIKKYLATQSITLTQPPWIGGMEVDLPHLYQTVQSLGGLKEVIEKKKWQKVADGMKIPKSAQDRVTKLDDIYCKYLLPYDTLSPEERGKLFDEVETEWLKKKNKALQRQQTPTNDNDEDDEDDSSDEIEECIVKGRNMPLNAFYRIARNTQRMWFGENQRGNEAEGASADEVESAFWKHVAERKRHVCVHAASIDSSGRGFGFSVAKNSPFARHSWNLKVLTNNAGSVLRALGPLMGVTIPTLHVGMLFSACCWYRDPHGLPWIEYLHTGAKKIWYGIPDKHNNSFREALTKMVPQYCKNKTIWLSSDTAMVPPELLVSNGVPLCRTVQEPGQFIIVFPKAFTSSICTGYVVSESVYFAQPSWLETAEQVFKDIQDSCEPSIFSFERLLFNIINDTRSHVDILKQILPSVIKIRLKELDYRKQLTNVGLAKRERLPLPNSGKGKRGKKVKEDDGDFECESCRANLFVSLVNNSQDDSVYCLPHGLQLINRKKQVLKHCTLMYTYDEDELDELIHKLENRIEAKSKKTNQIKQAK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: iTF_01267334; iTF_01268804; iTF_01268058; iTF_01270984; iTF_01266684;
80% Identity: -