Pcoc016736.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Pseudomyrmex concolor
Gene Symbol
JARID2
Assembly
GCA_014839585.1
Location
QVOB01010348.1:5504-12515[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 4.9e-23 1.6e-19 70.4 0.0 6 89 1325 1406 1321 1406 0.94

Sequence Information

Coding Sequence
ATGGTCTTAAGTCGCAACGACAAGAGGAAGAAGAGAGAAGGAGATCTGGTCGACCTCATGGATCCGCTTGCAGAATCTCCAAAAAGGACCAAAGTTCACGCACAAAGAAAGTTTGCACAAGGTGCAACTACAATGTTCAATACATCACCTACACCGGTCAAGGACAAAGAAAAAGCCAAACCTGCCAAGATAACTGAATTAATAACCCATAAACGTCCAAATACGGAAGATTTTCTAACATTTTTATGCTTTAGAGGAACGCCCATTTTACCACCTAGCTTAAATTTCTTTAATCTTGGCACCAAAAAAGAAAAAGAGAAATCAGAACTTAAACCTAAACTATTGCCCACTCCTGCCGACAAGGTGTCATCTTCCACTAGCGTTTCGGCAGAGCCACAACAACAAAAACAAGATACAAACCAAAAGAGCATGACAAAAGTAAAGCCTGTTGTGTCAGACAAGAAGAAGATACCTCCCAATACAATACACAAAAGTATCACTAAACTCAAGACAGCAACATCCACAATCTTCAGAAAGAAGTATGTTGAAGGCCAATATTCAACTGGCACCGCGAAGACGAAAGTCGCTCCGCCACTCAAACCAAAGAAGAAAGTCACGTTAAGACCGAAAGGTAGCGATACATCGAACACGGATATGTCGTCGGAGGAGGAAGACAGCAAGGAGGACAACGAGGAAGAAGAGTTACCTACGGAGAAGTCAACGTCCCAGATAAAGCGCAACGTACAGAGAGCTACTCGAAAGAAGATTTGTACCAGAAGCAAGTCGGAGATGCGTAGAGTCACGAGATCGTGCAGCAGCACTCCACGCAACGTCTCCACGCAGAATCTTTCTAGAAGACCCACCAGAAAGACGAAGGAAGCGGCCGCTGTGTACATGGAGCTTCTCGGACGAAAATTAGTAAGCCCGGATTTGGAGAACGACGACAACGATTCGGTCGAGAGTTTTCCCGAATTGCCGAGCGCCCGTAGAATAACGCAAACGGAGAACGAGCTCAAAGCCAAAGTGAAACAAGTGCCGACTGTTAGCACACGAGCGACTGTTAGCAAAAGTAAGGATTCTAAGATCAGTTCCTTCGCCGGTAATAAGCGACTGGATAAGAGCAAGAACACACTGATTTTGAGAAGTAAACGTCTGATAAGAATGCGGAGATATCGCGAGGAAGATAGCGAGGAGGAATCCGAGAGCTCGGTAGAAACGAATCAGACGAGACCCATCACCAGACAGAGTCTCGGTAAACTCGACAAACCGATCAGCAGGAGTCTCAGGTCGTCTAATAAGAACACACCGGTACTGATGGAAGTGCAAAGTAACAACAAACCGAAGACTCAGGTTCAGACTTGCGCGAAAACCGCTCGGGAAAAATTTATGTTGAAACGCAAATACAATCAAAATGTATCGAAAGCGTCATCGGATAAGACTGCCGTCGAATCGAAACAGAAAAGCGTCAAAGGCAATCGAAACGAGCACACGGAATCCGAGGAAGAAACGCTAGGAATGTTGCTGAAGAAAATCAAAAAAAAGAAAGAAGATGACGAAGAAGGAGAACGCATTTCTGACAATGTTGACAAAGCGAAAGATAGCGAGACAAAGATAGCGCACAAAGAAGCGCAAACCACGAAAGAATCGGACTTGGCGAAAGAGTCGGACGACGAAGAAGAATCTTTTCGTGGATTCACAAAGAAGGCGATATCGAAGGGTTTGAACTCGTGTCAGACACACGCTAACGTCAATCTTTTGACCCCGGAAACCGACGACAAGAGTCTCAAGGCGTTGTCGGAAACGAAGAATTCGCAAGAGATCAAAGAGGAAGAACCGTCACCGGTCAAGGAGGCTGAGTTTCCGATTGTTAATTTGAACACCGAATACAACATGTCTCTGCTGGATGATAAATCGATACCGGACATGTCCATTGACACGAAAAACTCATCACTGCCGCCCACGGAACAAACGAGCAAGAACATATGCAAGCACGAGGACGAAATTTCTTCCAATCTTATAAACATGCCGCTGTCGACTCTGCGCACGAGAAAGGAACGAGTAAACATGTCGACCGAACAGATCGAGAAGTGGCTGAACGAGAGTTCCTTCGCCAAAGAGGAGAGTAAGTTGGAGATGGAGACCGTTTCCACTTTCAGATACGATCCCACGGAAAGGTTGAAAGACGTCTCGCATCTGTCCATCTCGACGAAGATCCAGCATTTGGTGCGTCCCGTCAACGTCACGCTCTTAAAATTACCCTCAGATAAAAGTGCGAGGGACCGTTTGGGAACAATGCACAACAGAAATGTGATAACTGCGCAATCCGACGCACATAACATCGACGTAAAGCTCGAAAACACGATTATCGATAAAACCAAGGTTATTACCGAACCGAAAGAAATCGTCAAGAACAAGTACGAGAAGGTGAATAAGGATAGTTCTCTCACCGAGGACACCAACGACACCATGTCGAAATCGGATCAGAATTCGATAGACGGATCCTTAGAGAAGAAGTCACCGGAGAAAAAGATATTTCAACCGCGGAAGCCGTTTCTATCTAAAGTTAAGGAACGTAAGATTGTGACTCCGAACGTGAATGCGTTTTCTCCGGAGAACGAGAGCAGCGTTTACGCGTTTGAGAGTGATACCGAAGTGCCTATTAGTACACCATTTAGGAGGAAGAGTAAAGATACTGCCAAGGATATCGCTAGGTCGACTAGCACTCCTACCGCAATAACTACGTCTACTGCGACTTCCACAACATCCGAGACTAAACTAATTGCCGATGCCAACAAGACAGATGTTAAGGACAATTCTGAGACACTGGACAGTTGCAAGGACAAACTTTCCGGTGATATTGTAATGCGCGCATCGACATGCGAGAAGAGACAACAAGAGACGCAGGCACTGGTAAATACGGCTCAGTTGGAGCTCGAAACAAAGGCAACTCCGAGCTCGAACAAGTTCGAGTTGCCGAAACATTTCGCGAATTTAACTACCGTACAGGTGTTACCGCTCGATAAGCTCACGACCAGTTGGAGCAACGTAAACTGCAGCGCTTCCATAGCGGTGCAAGTGAATCTCGACGAGACGACACAGGAACCAGAGAGCAACGATGCGACGAATCCACAGAAGAGCACCGAGATATCCACTCAAACCGAAACGAATAACGAGAACGATGACGACAACGATGGACAATTGTTCTACATTCCGTTACAGCCTATTCGGAGCGGACCGAATTTGGTTCAGGGGCAACAGCTGATTCAAGGTGTTGCCGTTAAACTTACGGAGGGACCGACTGGTCCTAATCAGAGGGTGCTTCTTCACGCTAAATTGGTCACTAAGCCACCCTTGTCCGTGGCGCGCTGTCCTCCGATAGGAACCGTACAACCGACAACGCGAACTCCGCCCAATCCTATCGCGATTACGGTGGAACAACAAGTGCCATCGACCTCGACGACCACGACCGTATCCACCTCGGTAGCGAATATGCCGAGCGCGGAAACAACGCAACAACCAATATTACCGGTGAAGAATGACATTCTGAATCGTCCGAACGTTAGTACGAGCACGAGCAATGTTCTGGAAAAACTCGCGAAATCTCCAAAATCAGCCAGAGAAAGAAAAACCTCCATAGATTCGGCAAAAAGTGGAAAGAGAACGCAAGTGAAGCAAAGCAAACAGAAAGGGTTACACTCTTCCAGCAACACTACATTCCCAAGTATGAAAACCTTAGACGACGAAGCTCGCGTGGTCGAAGCGCCGACGTTTCATCCGACTGAGAAAGATTTTCAGGATCCTTTGGAATATATAGACAAGATAAAATCGGTCGCTGAGAAATTCGGAATTTGCAAAGTTGTGCCTCCATCGAATTTCAAACCAGAATGCAAGGTGTCCGATGATATGAGATTCACTGCTTACAATCAATACGTGCACCGCATGCTTCATAGATGGGGTCCTAACGTGAAGGAAATGATGGCTATCAAAAAATATTTAGCTACTCAAAGTATCACTTTGACTCAACCGCCATGGATTGGCGGGATGGAAGTTGATTTACCTCATTTGTATCAAACAGTTCAAAGCTTAGGTGGATTGAAAGAAGTTATAGAAAAAAAGAAATGGCAGAAAGTGGCAGATGGTATGAAGATACCAAAATCTGCACAGGATCGCGTTACTAAACTAGACGATATTTATTGTAAATATTTACTGCCGTACGATACACTATCTCCAGAGGAACGCGGGAAATTATTTGACGAAGTCGAAGCTGAATGGTTGAAGAAAAAAAATAAAGCTCTGCAAAGGCAACAGACACCAACCAACGACAATGATGAAGACGACGAAGACGACAGTTCCGACGAAATCGAGGAATGCATCGTAAAGGGAAGGAACATGCCTTTGAACGCTTTTTACCGAATCGCTCGTAATACGCAACGTATGTGGTTCGGCGAAAATCAACGGGGAAACGAGGCCGAAGGTGCTTCCGCGGACGAAGTGGAGAGTGCATTTTGGAAACACGTCGCCGAAAGAAAACGTCACGTTTGCGTTCACGCGGCGAGCATCGATTCGAGCGGTCGTGGATTCGGCTTTTCCGTTGCCAAGAACAGTCCGTTTGCCAGGCATTCGTGGAATCTCAAAGTGCTCACCAACAACACTGGATCAGTACTGAGAGCCTTGGGTCCTTTAATGGGTGTGACTATACCAACGCTCCACGTGGGCATGTTGTTCAGTGCTTGTTGCTGGTATCGCGATCCTCACGGTCTACCGTGGATAGAGTATCTTCATACGGGCGCGAAAAAGATTTGGTACGGAATACCTGACAAGCATAACAACAGTTTCCGAGAGGCGCTCACAAAAATGGTGCCGCAGTATTGCAAAAATAAGACCATATGGTTATCGTCTGACACTGCCATGGTTCCTCCGGAATTATTAGTGAGCAACGGCGTGCCATTGTGCCGCACCGTGCAAGAACCGGGACAGTTCATAATCGTGTTTCCGAAAGCGTTCACGTCGAGTATATGCACCGGTTACGTGGTGTCCGAGAGCGTGTATTTCGCGCAACCATCTTGGTTAGAAACTGCTGAGCAAGTATTTAAAGACATACAAGACAGTTGCGAACCTTCTATCTTCTCGTTTGAGAAATTACTATTTAATATTATTAACGATACAAGGTCTCACGTAGACATATTGAAACAGATACTACCAAGTGTGATAAAGATTCGTCTGAAGGAGTTGGATTACCGCAAACAACTGACAAACGCAGGTCTTGCAAAGAGAGAAAGATTACCACTGCCAAATAGCGGGAAAGGGAAGAGAGGGAAAAAGGTGAAAGAAGACGACGGCGATTTTGAATGCGAATCGTGTAGAGCTAACTTGTTTGTTTCATTGGTGAACAATTCGCAAGAAGATAGCGTTTATTGTCTACCGCATGGGTTGCAGTTAATCAGTCGTAAAAAGCAAGTTTTGAAACATTGCACTCTCATGTACACGTACGACGAAGATGAATTAGATGAATTGATTCACAAACTGGAAAACAGGATCGAAGCCAAATCTAAGAAAACTAATCAAATAAAACAAGTTAAGTAA
Protein Sequence
MVLSRNDKRKKREGDLVDLMDPLAESPKRTKVHAQRKFAQGATTMFNTSPTPVKDKEKAKPAKITELITHKRPNTEDFLTFLCFRGTPILPPSLNFFNLGTKKEKEKSELKPKLLPTPADKVSSSTSVSAEPQQQKQDTNQKSMTKVKPVVSDKKKIPPNTIHKSITKLKTATSTIFRKKYVEGQYSTGTAKTKVAPPLKPKKKVTLRPKGSDTSNTDMSSEEEDSKEDNEEEELPTEKSTSQIKRNVQRATRKKICTRSKSEMRRVTRSCSSTPRNVSTQNLSRRPTRKTKEAAAVYMELLGRKLVSPDLENDDNDSVESFPELPSARRITQTENELKAKVKQVPTVSTRATVSKSKDSKISSFAGNKRLDKSKNTLILRSKRLIRMRRYREEDSEEESESSVETNQTRPITRQSLGKLDKPISRSLRSSNKNTPVLMEVQSNNKPKTQVQTCAKTAREKFMLKRKYNQNVSKASSDKTAVESKQKSVKGNRNEHTESEEETLGMLLKKIKKKKEDDEEGERISDNVDKAKDSETKIAHKEAQTTKESDLAKESDDEEESFRGFTKKAISKGLNSCQTHANVNLLTPETDDKSLKALSETKNSQEIKEEEPSPVKEAEFPIVNLNTEYNMSLLDDKSIPDMSIDTKNSSLPPTEQTSKNICKHEDEISSNLINMPLSTLRTRKERVNMSTEQIEKWLNESSFAKEESKLEMETVSTFRYDPTERLKDVSHLSISTKIQHLVRPVNVTLLKLPSDKSARDRLGTMHNRNVITAQSDAHNIDVKLENTIIDKTKVITEPKEIVKNKYEKVNKDSSLTEDTNDTMSKSDQNSIDGSLEKKSPEKKIFQPRKPFLSKVKERKIVTPNVNAFSPENESSVYAFESDTEVPISTPFRRKSKDTAKDIARSTSTPTAITTSTATSTTSETKLIADANKTDVKDNSETLDSCKDKLSGDIVMRASTCEKRQQETQALVNTAQLELETKATPSSNKFELPKHFANLTTVQVLPLDKLTTSWSNVNCSASIAVQVNLDETTQEPESNDATNPQKSTEISTQTETNNENDDDNDGQLFYIPLQPIRSGPNLVQGQQLIQGVAVKLTEGPTGPNQRVLLHAKLVTKPPLSVARCPPIGTVQPTTRTPPNPIAITVEQQVPSTSTTTTVSTSVANMPSAETTQQPILPVKNDILNRPNVSTSTSNVLEKLAKSPKSARERKTSIDSAKSGKRTQVKQSKQKGLHSSSNTTFPSMKTLDDEARVVEAPTFHPTEKDFQDPLEYIDKIKSVAEKFGICKVVPPSNFKPECKVSDDMRFTAYNQYVHRMLHRWGPNVKEMMAIKKYLATQSITLTQPPWIGGMEVDLPHLYQTVQSLGGLKEVIEKKKWQKVADGMKIPKSAQDRVTKLDDIYCKYLLPYDTLSPEERGKLFDEVEAEWLKKKNKALQRQQTPTNDNDEDDEDDSSDEIEECIVKGRNMPLNAFYRIARNTQRMWFGENQRGNEAEGASADEVESAFWKHVAERKRHVCVHAASIDSSGRGFGFSVAKNSPFARHSWNLKVLTNNTGSVLRALGPLMGVTIPTLHVGMLFSACCWYRDPHGLPWIEYLHTGAKKIWYGIPDKHNNSFREALTKMVPQYCKNKTIWLSSDTAMVPPELLVSNGVPLCRTVQEPGQFIIVFPKAFTSSICTGYVVSESVYFAQPSWLETAEQVFKDIQDSCEPSIFSFEKLLFNIINDTRSHVDILKQILPSVIKIRLKELDYRKQLTNAGLAKRERLPLPNSGKGKRGKKVKEDDGDFECESCRANLFVSLVNNSQEDSVYCLPHGLQLISRKKQVLKHCTLMYTYDEDELDELIHKLENRIEAKSKKTNQIKQVK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01267334;
90% Identity
iTF_01270296;
80% Identity
-