Pcub007377.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Pseudomyrmex cubaensis
Gene Symbol
JARID2
Assembly
GCA_014825685.1
Location
QVOA01001377.1:14029-21231[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 5e-23 1.7e-19 70.4 0.0 6 89 1387 1468 1383 1468 0.94

Sequence Information

Coding Sequence
ATGGTCTTAAGTCGCAACGACAAGAGGAAGAAGAGAGAAGGAGATCTGGTCGACCTTATGGATCCTCTTGCAGCATCTCCGAAAAGGACCAAAGTTCACGCACAAAGAAAGTTTGCACAAGGTGCAACTACAATGTTCAATACATCACCTACACCAGTCAAGGACAAAGAAAAAGCCAAACCTGCCAAGATTACTGAATTAATAACCCATAAACGTCCAAATACGGAAGATTTTCTAACATATTTATGCTTTAGAGGAACACCCATTTTACCACCTAGCCTAAATTTCTTTAATCTCGGCACCAAAAAAGAAAAAGAGAAACCAGAACCTAAACCATTGCCCGCTCCTGCGGACAAGGTGTCATCTTCCACTAGTGTTTCGGCAGAGCCACAACAAAAGCAAGACACGAATCAAAAGAGCGTGACAAAAGTAAAGCCTGTTGTGTCAGACAAGAAGAAGATACCTCCCAATACAATACACAAAAGCATTACTAAACTCAAAACAGCAACGTCAACAGTTCAGGCGCTTAAAAAGAAATATCAGGAGCAACGTTTGGCCAAGCAGAGAATCAAAAACAAATTCAAAAAAACTACTTGCGTTATGAGAACCAGATCCTCAGAGAGAAGTATGTTGAAGGCCAATATTCAACTGACACCGAGAAAATTCCTACCTAGAATCAAAACCAAGCGACATGGCCTGAGAAGCAGCGTGCTGCCTGCCAAGACTAACAAATCTTTGCCGAAGACGAAAGTCGCTCCGCCACCCAAACCAAAGAAGAAAGTCACGTTAAGGCCGAAAGGTAGCGATACATCGAACACGGATATGTCGTCGGAAGAGGAAAACGGCAAGGAGGACAATGAGGAAGAGGAGTTACCTACGGAGAAGTCAACGTCCCAGATAAAGCGCAACGTACAGAGAGCTACTCGAAAGAAGATCTGTACCAGAAGCAAGTCGGAGATGCGTAGAGTCACGAGATCGTGCAGCAGCACTCCACGCAACGTCTCCACGCAGAGTCTCTCTAGAAGACCCACCAGAAAGACGAAGGAGGCGGCCGCTGTGTACATGGAGCTTCTCGGACGAAAACTGGTAAGCCCGGATTTGGAGAACGACGACAACGATTCGGTCGAGAGTTTTCCCGAATTGCCGAGCGCCCGTAGAATAACGCAAACGGAGAACGAGCTCAAAGCCAAAGTGAAACAAGTACCGACTGTTAGCACACGAGCGACTGTTAGCAAAAGTAAGGATTCTAAGATCAGCTCCTTCGCCGGTAATAAACGACTGGATAAAAGCAAGAACACACTGATTTTGAGAAGTAAACGTCTGATAAGAATGCGGAGATATCGCGAGGAAGATAGCGACGAGGAATCCGAGAGCTCGGTAGAAACGAATCAGACGAGACCCATCACCAGACAGAGTCTCGGCAAACTCGACAAACCGATCAGCCGGAGTCTCAGGTCGTCCACTAAGAACACACCGGTACTGACGGAAATGCAAAGTAACAACAAACCGAAGACTCAGGTTCAGACTTGCGTGAAAACCGCTCGGGAAAAATTTATGTTGAAACGCAAATACAATCAAACTGTATCGAAAGCGTCGTCAGATAAGACCGCCGTCGAATCGAAACAGAAAAGTGTCAAAGGCAATCGAAACGAGCACACGGAATCCGAGGAAGAAACGCTAGGAATGTTGCTGAAGAAAATCAAAAAAAAGAAAGAAGATGACGAAGAAGGAGAACGCATTTCTGACAATGTTGACAAAGCGAAAGATAGCGAGACAAAGGCGCATAAAGAAGCGCAAACCACGAAAGAGTCGGACTTGACGAAAGAGTCGGACGACGAAGAAGAATCTTTTCGTGGATTCACAAAGAAGGCGATATCGAAGGGTTTGAACTCGTGTCAGACGCACGCTAACGTTAATTTGTTGACCCCGGAAACCGACGACAAGAGTCTCAAGACGTTGCCGGACGTGCCGGAAACGACGGAAACGACGAATTCGCAAGAGATCAAAGAGGAAGCGTCACCGGTCAAAGAGGCTGAGTCTCCGATCGTTAATTTGAACACCGAATACAACATGTCTCTGCTGGATGATAAATCGATACCGGACATGTCCATTGACACGAAAAACTCATCACTGCCGCCCGCGGAACAAACGAGCAAAAACGTATGCAAGCACGAGGACGAAATTTCTTCCAATCTTATAAACATGCCGTTGTCGACTCTGCGCACGAGAAAGGAACGGGTAAACATGTCGACCGAACAGATCGAAAAGTGGCTGAACGAGAGTTCCTTCGCCAAAGAGGAGAGTAAGTTGGAGATGGAGACCGTTTCCACCTTCAGATACGATCCCACGGAAAGGTTGAAAGACGTCTCGCACCTGTCCATCTCGACGAAGATCCAGCATTTGGTGCGTCCCGTCAACGTCACGCTCTTAAAATTACCCTCAGATAAAAGTGCGAGAGACCGTTTGGGAACAATGCACAACAGAAATGTGATAACTGCGCCATCCGACGCACATAATATCGACGTAAAGCTCGAAAACACGATTATCGATAAAATCAAGGTCATTAACGAACCGAAAGAAATTGTCAAGAACAAGTACGAGAAGGTGAATAAGGATAGTTCCCTCACCGAGGACACCAACGACACCATGTCGAAATCGGATCAGAATTCGATAGACGGATCCGTGGAGAAGAAGTCACCGGAGAAAAAGATATTTCAACCGCGAAAACCGTTTCTGTCTAAAGTTAAGGAACGTAAGATTGTGACTCCGAACGTGAATGCGTTTTCTCCGGAGAACGAGAGCAGCGTTTACGCGTTTGAGAGTGATACCGAAGTGCCTATTAGTACACCATTTAGGAGGAAGAGTAAAGATACTGCCAAGGATACCGCTAGGTCGACTAGCACTCCTACCGCAATAACTACGTCTACTGCGACTTCTACGACATCCGAGACTAAACTAATTGCCGATGCCAACAAGACAGATGTTAAGGACAATTCTGAAACATTGGACAGTTGCAAGGACAAACTTTCCGGTGACGTTGTCATGCGCGCACCGACATGCGAGAAGAGACAACAAGAGACGCAGGCACTAGTAAATACGACACCGGCTCAGTTGGAGCTCGAAACAAAGGCAACTCCGAACTCGAACAAGTTCGAGTTGCCGAAACATTTCGCGAATTTAACTACCGTACAGGTGTTACCGCTCGATAAGCTCACGACCAGTTGGAGCAACGTAAACTGCAGCGCTTCCATAGCGGTGCAGGTGAATCTCGACGAGACGACACAGGAACCAGAGAGCAACGATGCGGCGAATCCACAGAAGAGCACCGAGATATCCACTCAAACCGAGACGAATAACGAGAACGATGACGAAAACGATGGACAATTGTTCTACATTCCGTTACAGCCTATTCGGAGCGGACCGAATTTGGTTCAGGGCCAACAGCTGATTCAAGGTGTTGCCGTTAAACTTACGGAGGGACCGACGGGTCCAAATCAAAGGGTGCTCCTTCACGCTAAATTGGTCACTAAACCACCCTTGTCCGTGGCGCGCTGTCCTCCGATAGGAACCGTACAACCGACAACGCGACCTCCACCCAATCCCATCGCGATCACGATGGAACAACAAGTGCCGTCGACCTCGACGACCACGACCGTATCCACCTCGGTAGCGAATATGCCGAGCGCGGAAACAACGCAGCAACCAATATTACCGGTGAAGAATGACACCCTGAATCGTCCGAACGTTAGTACGAGCACGAGCAATGTTCTGGAAAAACTCGCGAAGTCTCCAAAGTCAGCCAGAGAAAGAAAAACCTCCATAGATTCGGCAAAAAGTGGAAAGAGAACGCAAGTGAAGCAAAGCAAACAGAAAGGGTTACACTCTTCCAGCAACACTACATTCCCAAGTATGAAAACCTTAGACGACCAAGCTCGCGTGGTCGAAGCGCCGACGTTTCATCCGACTGAGAAAGATTTTCAGGATCCTTTGGAATATATAGACAAGATAAAATCGGTCGCTGAGAAATTCGGAATTTGCAAAGTTGTGCCTCCATCGAATTTCAAACCAGAATGCAAGGTGTCTGATGATATGAGATTCACTGCTTACAATCAATATGTGCACCGCATGCTTCATAGGTGGGGTCCTAACGTGAAGGAAATGATGGCTATCAAAAAATATTTAGCTACTCAAAGTATCACTTTGACTCAACCGCCATGGATTGGCGGAATGGAAGTTGATTTACCTCATTTGTATCAAACAGTTCAAAGCTTAGGTGGATTGAAAGAAGTTATAGAAAAAAAGAAATGGCAGAAAGTGGCAGATGGTATGAAGATACCAAAATCTGCACAGGATCGCGTTACTAAACTAGACGATATTTATTGTAAATATTTACTGCCGTATGATACACTATCTCCAGAGGAACGCGGGAAATTGTTCGACGAAGTCGAAGCCGAATGGTTGAAGAAGAAAAACAAAGCTTTGCAAAGGCAACAAACACCACCCAATGACAATGACGAAGACGACGAAGATGACAGTTCCGACGAAATCGAGGAATGCATCGTAAAGGGAAGGAACATGCCTTTGAACGCTTTTTACCGAATCGCTCGTAACACGCAACGTATGTGGTTTGGTGAAAATCAACGGGGAAACGAGGCCGAAGGTGCTTCCGCGGACGAAGTGGAGAGTGCGTTTTGGAAACACGTCGCCGAAAGGAAACGCCACGTTTGCGTTCACGCGGCAAGCATCGATTCGAGCGGCCGTGGATTCGGCTTTTCCGTTGCCAAGAACAGTCCGTTCGCCAGGCATTCGTGGAATCTCAAAGTGCTCACCAACAACGCTGGATCAGTATTGAGAGCCTTGGGTCCTTTAATGGGTGTGACTATACCAACGCTCCACGTGGGCATGTTGTTCAGTGCTTGTTGCTGGTACCGCGATCCTCACGGTCTACCGTGGATAGAGTATCTTCATACGGGCGCGAAAAAGATTTGGTACGGAATACCCGACAAGCATAACAACAGTTTCCGAGAGGCGCTCACAAAAATGGTGCCGCAGTATTGCAAAAATAAGACCATATGGTTATCGTCTGACACTGCTATGGTTCCTCCGGAAGTATTAGTGAGCAACGGCGTGCCGTTGTGCCGCACCGTGCAAGAACCGGGACAGTTCATAATCGTGTTTCCGAAAGCGTTTACGTCGAGTATATGCACCGGTTACGTGGTGTCCGAGAGCGTGTATTTCGCGCAACCATCTTGGTTAGAAACTGCTGAGCAAGTATTTAAGGACATACAAGATAGTTGCGAACCTTCTATCTTCTCGTTTGAGAAATTACTATTTAATATTATTAACGATACAAGGTCTCACGTGGACATATTGAAACAGATACTACCAAGTGTGATAAAGATTCGTCTGAAGGAGTTGGATTACCGCAAACAACTGACAAACGCAGGTCTTACCAAGAAAGAAAGATTACCACTGCCAAATAGCGGGAAAGGAAAGAGAGGGAAAAAGGTGAAAGAAGACGACGGCGATTTTGAATGCGAATCGTGTAGAGCTAACTTGTTTGTTTCGTTGGTGAACAATTCGCAAGAAGACAGCGTTTATTGTCTACCGCATGGGTTGCAGTTAATCAATCGTAAAAAGCAAGTTTTAAAACATTGCACTCTTATGTACACGTACGACGAAGATGAATTAAATGAATTGATTCACAAACTGGAAAACAGGATCGAAGCCAAATCTAAGAAAACTAATCAAATAAAACAAGTTAAGTAA
Protein Sequence
MVLSRNDKRKKREGDLVDLMDPLAASPKRTKVHAQRKFAQGATTMFNTSPTPVKDKEKAKPAKITELITHKRPNTEDFLTYLCFRGTPILPPSLNFFNLGTKKEKEKPEPKPLPAPADKVSSSTSVSAEPQQKQDTNQKSVTKVKPVVSDKKKIPPNTIHKSITKLKTATSTVQALKKKYQEQRLAKQRIKNKFKKTTCVMRTRSSERSMLKANIQLTPRKFLPRIKTKRHGLRSSVLPAKTNKSLPKTKVAPPPKPKKKVTLRPKGSDTSNTDMSSEEENGKEDNEEEELPTEKSTSQIKRNVQRATRKKICTRSKSEMRRVTRSCSSTPRNVSTQSLSRRPTRKTKEAAAVYMELLGRKLVSPDLENDDNDSVESFPELPSARRITQTENELKAKVKQVPTVSTRATVSKSKDSKISSFAGNKRLDKSKNTLILRSKRLIRMRRYREEDSDEESESSVETNQTRPITRQSLGKLDKPISRSLRSSTKNTPVLTEMQSNNKPKTQVQTCVKTAREKFMLKRKYNQTVSKASSDKTAVESKQKSVKGNRNEHTESEEETLGMLLKKIKKKKEDDEEGERISDNVDKAKDSETKAHKEAQTTKESDLTKESDDEEESFRGFTKKAISKGLNSCQTHANVNLLTPETDDKSLKTLPDVPETTETTNSQEIKEEASPVKEAESPIVNLNTEYNMSLLDDKSIPDMSIDTKNSSLPPAEQTSKNVCKHEDEISSNLINMPLSTLRTRKERVNMSTEQIEKWLNESSFAKEESKLEMETVSTFRYDPTERLKDVSHLSISTKIQHLVRPVNVTLLKLPSDKSARDRLGTMHNRNVITAPSDAHNIDVKLENTIIDKIKVINEPKEIVKNKYEKVNKDSSLTEDTNDTMSKSDQNSIDGSVEKKSPEKKIFQPRKPFLSKVKERKIVTPNVNAFSPENESSVYAFESDTEVPISTPFRRKSKDTAKDTARSTSTPTAITTSTATSTTSETKLIADANKTDVKDNSETLDSCKDKLSGDVVMRAPTCEKRQQETQALVNTTPAQLELETKATPNSNKFELPKHFANLTTVQVLPLDKLTTSWSNVNCSASIAVQVNLDETTQEPESNDAANPQKSTEISTQTETNNENDDENDGQLFYIPLQPIRSGPNLVQGQQLIQGVAVKLTEGPTGPNQRVLLHAKLVTKPPLSVARCPPIGTVQPTTRPPPNPIAITMEQQVPSTSTTTTVSTSVANMPSAETTQQPILPVKNDTLNRPNVSTSTSNVLEKLAKSPKSARERKTSIDSAKSGKRTQVKQSKQKGLHSSSNTTFPSMKTLDDQARVVEAPTFHPTEKDFQDPLEYIDKIKSVAEKFGICKVVPPSNFKPECKVSDDMRFTAYNQYVHRMLHRWGPNVKEMMAIKKYLATQSITLTQPPWIGGMEVDLPHLYQTVQSLGGLKEVIEKKKWQKVADGMKIPKSAQDRVTKLDDIYCKYLLPYDTLSPEERGKLFDEVEAEWLKKKNKALQRQQTPPNDNDEDDEDDSSDEIEECIVKGRNMPLNAFYRIARNTQRMWFGENQRGNEAEGASADEVESAFWKHVAERKRHVCVHAASIDSSGRGFGFSVAKNSPFARHSWNLKVLTNNAGSVLRALGPLMGVTIPTLHVGMLFSACCWYRDPHGLPWIEYLHTGAKKIWYGIPDKHNNSFREALTKMVPQYCKNKTIWLSSDTAMVPPEVLVSNGVPLCRTVQEPGQFIIVFPKAFTSSICTGYVVSESVYFAQPSWLETAEQVFKDIQDSCEPSIFSFEKLLFNIINDTRSHVDILKQILPSVIKIRLKELDYRKQLTNAGLTKKERLPLPNSGKGKRGKKVKEDDGDFECESCRANLFVSLVNNSQEDSVYCLPHGLQLINRKKQVLKHCTLMYTYDEDELNELIHKLENRIEAKSKKTNQIKQVK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01268804; iTF_01270984; iTF_01268058; iTF_01266684;
90% Identity
iTF_01270296;
80% Identity
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