Malb012077.1
Basic Information
- Insect
- Meganola albula
- Gene Symbol
- retn
- Assembly
- GCA_936440415.1
- Location
- CAKZFH010000146.1:1874694-1881423[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8.2e-20 1.7e-16 60.4 0.0 12 89 24 100 17 100 0.87 2 2 4.3 9.2e+03 -2.8 0.0 25 38 229 242 191 243 0.59
Sequence Information
- Coding Sequence
- ATGCAATTGGACGCAGCTGACGACCGTTCAAGTCGCGGTCCCGGCCGCTCGCGCAGCCAACTTCGTGCGATATCACAGCACAACGACTGCACTCCAATTAACCGACTCCCTATAATGGCGAAGTCAGTGTTAGATCTCTATGAGCTGTACAACCTGGTGATCGCTCGCGGGGGGCTGGTGGAAGTGATTAACAAGAAGCTGTGGCAGGAGATCATCAAGGGGCTCCGGCTACCGTCTTCTATCACGTCAGCGGCTTTCACGTTACGCACACAATATATGAAGTACCTGTATGATTACGAGTGTGAAAAGAAGAATTTGTCAACAAGGAGTGAGTTGGACGCGGCCATTGAAGGCAACAAGCGCGAGGGGAGACGCGCCTCTGGGCAATATGATGCACAGGCGGCGTTAGCCATGCCGCCCCTAAACCGTGGCGTGCCTGCGTCCCTCGCGCAACTATCACAACACATGCAACCTCTGTCGCTGTCGCTCGGCGGTGTTGCGCCGCGCTTGCCGCCGTTGCCACCGCACGCGCCGCACCTTGCGCCGCACGACATCGAGTTCCGCGTGCGGGAGTACATGAAGATGATCCAGCAACAACGGGAACTTATGAGGAATGGTTCAGAGTCACCTCCAAGTTCTACCGGTCCCACGACGTTGATGTCTCCTCGCGACGCGGCGTTATCCGCGATCGATGTGTCGCGACTGACGCTCTGGTCGCTCTACAACAACAACAACAACAGCCCCGCACCCGACCTCGAGCCGCAACGCGAGGCCCTAAACCTCAGTGAGAGTCCTAACTCAAGCACGAGCGGTGGCAAGCGTGAGGCGTGCCGCTCCCCCCCGCCGCCCGCCAAGCGGCGCACCCCGCACCCGCCCTCGCCGCGCGTGACGTCACCGCGCCCGCGGCACTCCCCGCCCCCGCACCCCACACTCAACGGAGGTAGCAACGGGGTTAATGGGGCTGCATTTAAAATCACAACCAGAGGTGACGCAAGCACAGGTGATCAACAGCTAGTAGTATCAATAGAACTTAATGGAGTGACGTACGAAGGTGTACTCTTCCCCTCCGGCAACGGACAAAATGGACACCGGCAAATGGTGTCTTAA
- Protein Sequence
- MQLDAADDRSSRGPGRSRSQLRAISQHNDCTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYDAQAALAMPPLNRGVPASLAQLSQHMQPLSLSLGGVAPRLPPLPPHAPHLAPHDIEFRVREYMKMIQQQRELMRNGSESPPSSTGPTTLMSPRDAALSAIDVSRLTLWSLYNNNNNSPAPDLEPQREALNLSESPNSSTSGGKREACRSPPPPAKRRTPHPPSPRVTSPRPRHSPPPHPTLNGGSNGVNGAAFKITTRGDASTGDQQLVVSIELNGVTYEGVLFPSGNGQNGHRQMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00632547;
- 90% Identity
- iTF_01264183;
- 80% Identity
- -