Basic Information

Gene Symbol
-
Assembly
GCA_017607525.1
Location
JAANIA010001351.1:1769788-1780453[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 32 5.1e-06 0.00029 20.2 1.0 1 23 263 285 263 285 0.98
2 32 0.0073 0.42 10.3 3.7 1 23 308 331 308 331 0.96
3 32 0.00049 0.028 14.0 0.5 2 23 338 360 337 360 0.96
4 32 0.00052 0.029 13.9 0.1 1 21 380 400 380 401 0.95
5 32 0.01 0.58 9.8 0.1 2 23 499 520 498 520 0.95
6 32 0.005 0.29 10.8 0.2 1 23 526 549 526 549 0.91
7 32 0.00015 0.0086 15.6 0.2 1 23 620 643 620 643 0.96
8 32 0.092 5.2 6.8 2.3 1 23 649 672 649 672 0.95
9 32 0.098 5.6 6.7 1.5 1 23 685 707 685 707 0.97
10 32 2.8e-05 0.0016 17.9 0.9 3 23 752 773 751 773 0.96
11 32 2.4 1.4e+02 2.4 0.4 1 23 805 828 805 828 0.92
12 32 0.0042 0.24 11.0 1.0 2 23 835 858 834 858 0.94
13 32 0.73 42 4.0 0.0 2 23 867 889 867 889 0.90
14 32 0.021 1.2 8.8 0.0 2 23 896 918 895 918 0.93
15 32 7.2e-05 0.0041 16.6 3.2 1 23 926 948 926 948 0.97
16 32 0.028 1.6 8.5 1.3 3 23 986 1008 984 1008 0.93
17 32 0.00017 0.0097 15.4 3.3 1 23 1011 1034 1011 1034 0.97
18 32 0.00056 0.032 13.8 0.1 2 23 1041 1063 1040 1063 0.96
19 32 0.00074 0.042 13.4 3.9 1 21 1090 1110 1090 1111 0.95
20 32 0.0022 0.12 11.9 1.8 2 23 1125 1146 1124 1147 0.93
21 32 0.31 17 5.2 1.1 1 23 1150 1173 1150 1173 0.94
22 32 0.021 1.2 8.8 2.1 2 23 1180 1203 1179 1203 0.90
23 32 1.9 1.1e+02 2.7 0.1 2 23 1211 1233 1210 1233 0.94
24 32 2.6 1.5e+02 2.2 0.0 2 23 1240 1262 1239 1262 0.88
25 32 0.18 10 5.9 2.7 2 23 1271 1293 1271 1293 0.96
26 32 0.56 32 4.4 0.5 2 23 1299 1321 1298 1321 0.91
27 32 0.013 0.77 9.4 0.1 1 23 1383 1406 1383 1406 0.95
28 32 0.00014 0.0081 15.7 1.1 1 21 1434 1454 1434 1455 0.95
29 32 0.26 15 5.4 1.9 2 23 1556 1578 1555 1578 0.94
30 32 0.74 42 4.0 0.4 2 23 1585 1607 1584 1607 0.94
31 32 0.56 32 4.4 2.5 1 23 1618 1640 1618 1640 0.97
32 32 0.017 0.95 9.2 0.2 1 19 1644 1662 1644 1665 0.94

Sequence Information

Coding Sequence
CGAGGGACGCGGAGCTTTCTCAAGAGACTTGGCGACACAACGATGGCGACGATATCGACGATCACGACGACAATGTCGATGTCAACGACGAGGATTGAGACAGCGATGGCGACAGAGCCGAGAAGGAACTATAACGAACTATGTCGCTTATGCGCTTCTTACGACGCCGTTAGGATGCATATATTTGGCCAGGAAGGCAAGAATCGTCAACTCGTCGACAAGATTGAAACGTGCTTGCCGTTCAAGATAATGGAAGATGATTATTTGCCAAAAGTCCTGTGTTATCGATGTATGTACAACTTGGAGAATTTCTATGACTTTAGGACTGCGTGTGTTAACGCAGCTGTTTTGTTGGAAAGAAATAGGCCGAAGGAAGGCGTGAGCGATGAAGGTGCAAATGACACTGCGCAATCCTGCGAGATGCGCGTGGCGTTtcttaagaaagaaaatatgccAGTACTTATCCCAGAAGCACCCGTAGTCAATCCCAATGCAGCATTGGGTACGCCACCGAGATTAAATTCGGATGGTGAAGCAGATCCCGAGATCGAAGAGATTCTTGATACAAGTGAAGGTACGGATGAAGTGATCGACGATTCGGAAGATCGGCGATCGGAATATGAGATGGCATACGAAATGGACATGGAGACGAATCCTAGCGACTTCTTGGAAATGACCCCGATGGTAACCGAAGAAAATGAAGAGGAATGTAGTACAAACAACACGAATGCTGCGACTGCTCAAGATACCACGGTTTTCCCACATACGTCACAACAACATGAGGTCTACGTCTGTTCTCTATGCAACAAAGCGTTCAGTTCCAAGGGTCACTTGTCCCTGCACGCGAGGATTCACGTGGGTGAGGGTGATGTGATTGGCGAAAGAGTAATTACCGACGACCATACTTCGTACCAACGACCGTATCAATGTGATCTTTGTCATAAATCGTATTCTACTGCGAAGCATCGCTGGGGACACGTTTCTACAACGCATCGGGGACATCCTGCAGTAACGTGTGCGTACTGTTCTCGTATATATTCGACGCGATATAATCTCGATGAACATATAAAATCACGACATGCTGGGCTACCACCACCTCCAGAATTATCGGTTCCTCTAACGCGTACGGAAACACATTACCAGTGCCAAACATGTCCGATGGTGTTTACGGATCTAGCAGATTTCAATGCGCATCGTCAGATATGCATTCAGGAACAACGTACAGATTTATTAGGTCAAACCGAAGcgcagaataataaaattttcgccGATACATCCGACGTCTCGAGTATAGATTTGGATGACGAGAATAAAGACTTTAAGAATGCCGAGGCTAAATTGGCGAAAAATCCACAGTTAACCATATTGAAACAGGCGCTGACTAAAGGAGATAATTTAAAACGGAATTTCGATGATGATGGTTCGACGTCTAGCGGCAAGccgaaaaaaatagttaagtcagAAGAAGGCGAGGCAAATCCTCAGAAGAGATGGTATTGTGAAGCTTGTCCACAAAGTTTTACATCAGTGGAGAGTTTAAAAGAACACGAGATTAGACACGATGCCGAAAAGCCATATATTTGCATACTATGCAACAaagattttgttttgaaatcttCATTAATTAGGCATATTACAGTGTTACATGGTGTTGATCCTACTCCTATCATCGACAGTGATAAGTGTCTAAAGGCAACAGTAATGTCTCAGAATTGGAACGATCGAGTGGACGTCAGCGTTTATGAGCAAAGTGAAATAAAAGACCCACCAGAGCTCTCGTCGTCACCTGAgataaatttagagAATGATGACAAGGATTATAAAAACAACCATGAGAATGTAGAAATTGAAACAGTATTTGTGTGTGAGACTTGTAAGCGAGATTTTAACGATCGAGCATCATTATGGCTGCACATACGAGCAATGCACAAGGAATATGCAGCATTTACCTGTGGAGTGTGTTTAAAGATGtgctttaataatatacaacttCAAAATCATGTCTTCATGTATCATGGAAGGTCTAAGCTTTTAATCTCTGAACAAAGAAGGTATAGTTGCACGATATGCGGTAGACAGCATGACTCGAGAAAAAAGCTAATCACTCATGTCTCGATACATAATGTCGATCCTGCCTATGATCCTGGAAGTTTTGTACAATTGAACAGTAATTATTACAACGAAAACTTGAATGGTAACGAAGGCAATGAACAAGTATTAGATTTTGACGGAGAAGATGGCGAGAAAGTTGATTGttacatttgttataaatcTTTTCCGACTGAGGATCATCTTATACGACATCAGAGAAATGCTCATAAGtcTGACCAGATTTCGTTAGGAGATGCTGCGGGTGGTGGAAATACTCTAAGTGTCAATGGCAATGGTAATAGAGCGCAGTatcatttgttttttgtttgcgAAGTATGTGGTAGTTCACATTCGAGCAAATGGGAACGTTGGTTGCATATCAATAACACACATAACAATGAACCTTCTATTAAATGTGAATTGGAAAATTGCGGAAAAATATTTGCGACGAAATCGTTACGTAATGAACATCTTCAGCATCATGCGATACAAGGACCTTCGCCAAACACCTGCGAGATATGTGGAAAATTATGGCCTACTCGCGTTGATTATTGGAAACATGTGATGGGCGTACACGCAGATACAGTGCCTCTAATTTGTGGCGTTTGTTTGAAAGTATTCTCCGACGTTATGCAATTGAGCGCACACGTTAAGGCGAAACATTGGCCACTAACCAGTGGTGATTTTTGTTGTGATATTTGCGGTAGACCATATTCCAATAAATCGAAAATGTCTCGGCATAGAAAAATCCATGGCTTGGAAACGGCTATGGACGCTGCATGCGATAATAGCAGTTTTAATGAAACGACCAATGAATCGGTGAAACCTGATCACAGTAATGGCGCTTcagaaatagaattaaattgcGAGCAGTGCCCTGAACTTAGTTTCACGACATTGGACAGTTTGTGTAATCATCGACGGATAACGCACAATCTTTTCCCGTGCGATTTGTGTAACAAATGTTATGGCAGAACGTCACATTTATGGAAACATGTAAATAGGGTGCACAAAGGACACACAGACGTGACCTGTCCTTATTGTGCAAAGACAAGCGCGTCAAGGGATCATCTGGCAGCACATATTGCAAAGATTCATAGGTTCATGCCCACAGTGGGTAAGGACAATCAAAACTGCGTCACTTCCAAGTCCTTGAGTACAGACGATGGTGTCTTgcattattgtgaaaaatgtaacaaaggATTCCATAAACGCTATTTGCTCCGTCGTCATATGAAAGGTTGTCAAAACTATCGTAAAGATCCTGGGGCATTGTTGACTCGTTGCCGAGCCTGCGAGAGGATATTTAAAGATCGCGCGAGTCTGCAGAAACATATTGAAAATCATCATACTACATATACTTGCCATTTGTGTAATGAGACGATCACTTCCAAGCTAGGTATCATGACACACAATCGTATCAATCATATGGATCATCCGGATCTGACGTGCGACCATCCAAGCTGTAAAAAACTTTTCCGCACTAAAGAAGATTTGGAATCTCATCGAAAAGATCACAAATATCATAGCAATCTGGACGTTTGTGATTTTTGCGGTGACACCgtggaaaataaattgaaactgAAGATGCATGTATTATCGTTGCATCGAAACGAGATCGGCGTATCCTGTGGGGTCTGTCTCATTCCAATGAAGGATCCCAAAGATTTGAAAAAACATGTCGAAGCGGTGCATAGCAGCGTTCTCTCTAAACCAAACACGTGTCAGGTATGTGGCAAGCAATATGCATCCAAATGGAAGGCTTTCGATCACACGAAGAAGTGTCATGGCAAAGTTTTTCTCACATGCAAACAGTGTTTAGCCGTTTTTACAGACGAGAATGATATACGCGATCACTATGAACATGTGCATAACGTTCCAAAGGACCAATTAGCTATTTTCGAATATAGAATGGATATTGGTGCAAAGAGGGAGGGTTACGAGACTCCTGATATCATTGTGAAGGAGGAACCTGATGATTTAGAGTTTGATGAAGAAATGTGTGACGAAAGTTCGAATGATTCTCGCAAACGTAGAAGATCGCCAAACGATACGTATGATTGCGAGATGTGTCCCGAGATCTTCCTCAATTCAGACACTCTCGCTAAGCATTATCAGAACGTCCATAATACAGACCCCGTCCGTATGTTTAAGAAATTCAGAAAGGATAATAGCGATGGCAAGCGCAAGATGAGAAATAGAAACAACTTTGAATGCAAGAATTGCAAAAAGCAATTCTCTACTAAGACTCTGTTCTGGAATCACATCAATATATGTACACGACGAAACTCGATAGGTAGATTTGACATGCCGAATAATGTTCCGACATCAATTCTGGAGTCTCATCTGAAAAACAATAATCAGATTCAACGAGAAGAACCGGTACCGCTTACGAACGAGTCCAACTTGAACATTCCCGACTTCAATCTATTCGAAGACATCAATTTGCAATTGTCAGCTCAGAAACCTGTGCCGAATCTTATGCCATTGTCGCAGATGAAAGTGACGGGTAACGGCAAATGCTCGAGAAAAGACTCACGCAAGGTGTATGATGAATCAACCAATACCGAGTGCACGTGCGAAGTTTGTGGTAAACAATGGCCCGCCAAGAAACATTTGTGGCAACATCTAATTCGTTTCCATCGCGCTGAAGCTGCTGTTACATGTGGTGTATGTTTGAAACTGTGTAAATCTTACCAAGACTTGGCCGATCACCTGAAGGCTGAGCATGCTCCTGTTTTGTCACCGGAGGGCAATAATTTCACATGTAAGACATGCGGTAGATATCACAACGCGAGAAGCAAATTGCTGTTGCACATGAGCATCCATATCGGAAACTTCCGGTGTCAAAAGTGCCAGCAAGGTTTTGCAAGTGAGGAGAAACTCACCGAGCATGCAACGAGCTGCAATGGCAAATCGGAGTTTGAGGATAATACAGTGGCAGATGAAGATAATGCAAAGAATGACAACGACGAGAAGGGCAGTTTAATCACCGACGAGACATCAGTCATTGAGGAAGCAGAGGAAGCGGAGGAAGCAGATTTTGAATCAGAAGGTGAAGGAAGTAGGGATATTCACGATAGAGATAATTCGGAAAATAGTGAAGAAGACAATTCGGAAAATAGTGATGATTCAGATAGCGATAGTAATAGTAGTTCGAGCGAAGACGAAAACGAAAATGAaggagaggaagaggaggaggaagaggaagagaatgaaaacgaaaaTGAATCTGATACGAGAACTACTAGTAGAGCGAGCGGTGATAGTGTATCATGTAATTCCGATAGTGACGATGAATCAGATATGGATGAAACGCAAGTGGACGCAACGGAAAAGAAAGCTGTACAATTGAACGATATTAATAGATTCAGGATATGTAGTGACGGTATTCAAGAGAATATGCCAGTGGAGACAAATATCGAAGATCAGAAAACTGATCTTACATCCATAGCAACAGTTGGAGAACAGACTACatcgaataatttaaatgatctTTTGATTTCTAATGTACCTGGAAACATGGGCACCGACAAATTTGAGGTATTTCGTGTCGAAAAATTACAACAAGCTACGACGAGCGATGTAGACTCTGATAACGAAGACGATGATGATAACGAGGAAGATGATGAGGAAACTAATGAAaatgaagaagaggaagaagaggaagaagaggaggatGATGAAGATGACGATGATGGACCGCCTGTGTTAAGCCCAATAATGCCTTTGTTACCAGAAAACGAATCTGAGGAGTACAGCGGTACGACAGATCGCACGAGGCACAAGCTTAGTCCAATGGTTTCGTTGAGTATAGCTAAAGATCTAGAGGAATGCGAAATAACTGAAATACCAAATGACACGGACAATGTGTCAAACACAGTCAATTTCTTCGCggctaataataatgatttgcCCGTAACATGGGACGAGAATTTGGATGGTAACGTAATCAACAATGACGATTGCAACTCCGACGCTGGAAACAGGGAGAAAAATGAGGAACTTGATAAGGAATACGTAAAAATAGAAGTAAACGAAGGCGACTTTGAGGAAGATTCCATGGATGAGAACGTAGTGGATAACAGAGAAGATGATGGAGACAATCAAGTGCATGAGGTGCATAATCTGGACGGAACTGTGTTAATGGTGACTAATGACGCGGAAggtaatcaaattttgatagaaCGAAATGTGTTAGATATCGATAACGAGGACTCTAATATCGAAGCAGCCCAGTATATTTATCCAGAGAACACCTACGAGATCGAGGAAGAAGATTATCCAACGCGAAACGAAACCGATGTCATGCAGACGGACGAAATGCAAGGTAGTATGTCCTACGTTCAGGATACTTCGGAAAACGAAGATAGTATGCAGAATGATATCGAGGAAAACAGTGATGTGCAAAAACAG
Protein Sequence
RGTRSFLKRLGDTTMATISTITTTMSMSTTRIETAMATEPRRNYNELCRLCASYDAVRMHIFGQEGKNRQLVDKIETCLPFKIMEDDYLPKVLCYRCMYNLENFYDFRTACVNAAVLLERNRPKEGVSDEGANDTAQSCEMRVAFLKKENMPVLIPEAPVVNPNAALGTPPRLNSDGEADPEIEEILDTSEGTDEVIDDSEDRRSEYEMAYEMDMETNPSDFLEMTPMVTEENEEECSTNNTNAATAQDTTVFPHTSQQHEVYVCSLCNKAFSSKGHLSLHARIHVGEGDVIGERVITDDHTSYQRPYQCDLCHKSYSTAKHRWGHVSTTHRGHPAVTCAYCSRIYSTRYNLDEHIKSRHAGLPPPPELSVPLTRTETHYQCQTCPMVFTDLADFNAHRQICIQEQRTDLLGQTEAQNNKIFADTSDVSSIDLDDENKDFKNAEAKLAKNPQLTILKQALTKGDNLKRNFDDDGSTSSGKPKKIVKSEEGEANPQKRWYCEACPQSFTSVESLKEHEIRHDAEKPYICILCNKDFVLKSSLIRHITVLHGVDPTPIIDSDKCLKATVMSQNWNDRVDVSVYEQSEIKDPPELSSSPEINLENDDKDYKNNHENVEIETVFVCETCKRDFNDRASLWLHIRAMHKEYAAFTCGVCLKMCFNNIQLQNHVFMYHGRSKLLISEQRRYSCTICGRQHDSRKKLITHVSIHNVDPAYDPGSFVQLNSNYYNENLNGNEGNEQVLDFDGEDGEKVDCYICYKSFPTEDHLIRHQRNAHKSDQISLGDAAGGGNTLSVNGNGNRAQYHLFFVCEVCGSSHSSKWERWLHINNTHNNEPSIKCELENCGKIFATKSLRNEHLQHHAIQGPSPNTCEICGKLWPTRVDYWKHVMGVHADTVPLICGVCLKVFSDVMQLSAHVKAKHWPLTSGDFCCDICGRPYSNKSKMSRHRKIHGLETAMDAACDNSSFNETTNESVKPDHSNGASEIELNCEQCPELSFTTLDSLCNHRRITHNLFPCDLCNKCYGRTSHLWKHVNRVHKGHTDVTCPYCAKTSASRDHLAAHIAKIHRFMPTVGKDNQNCVTSKSLSTDDGVLHYCEKCNKGFHKRYLLRRHMKGCQNYRKDPGALLTRCRACERIFKDRASLQKHIENHHTTYTCHLCNETITSKLGIMTHNRINHMDHPDLTCDHPSCKKLFRTKEDLESHRKDHKYHSNLDVCDFCGDTVENKLKLKMHVLSLHRNEIGVSCGVCLIPMKDPKDLKKHVEAVHSSVLSKPNTCQVCGKQYASKWKAFDHTKKCHGKVFLTCKQCLAVFTDENDIRDHYEHVHNVPKDQLAIFEYRMDIGAKREGYETPDIIVKEEPDDLEFDEEMCDESSNDSRKRRRSPNDTYDCEMCPEIFLNSDTLAKHYQNVHNTDPVRMFKKFRKDNSDGKRKMRNRNNFECKNCKKQFSTKTLFWNHINICTRRNSIGRFDMPNNVPTSILESHLKNNNQIQREEPVPLTNESNLNIPDFNLFEDINLQLSAQKPVPNLMPLSQMKVTGNGKCSRKDSRKVYDESTNTECTCEVCGKQWPAKKHLWQHLIRFHRAEAAVTCGVCLKLCKSYQDLADHLKAEHAPVLSPEGNNFTCKTCGRYHNARSKLLLHMSIHIGNFRCQKCQQGFASEEKLTEHATSCNGKSEFEDNTVADEDNAKNDNDEKGSLITDETSVIEEAEEAEEADFESEGEGSRDIHDRDNSENSEEDNSENSDDSDSDSNSSSSEDENENEGEEEEEEEEENENENESDTRTTSRASGDSVSCNSDSDDESDMDETQVDATEKKAVQLNDINRFRICSDGIQENMPVETNIEDQKTDLTSIATVGEQTTSNNLNDLLISNVPGNMGTDKFEVFRVEKLQQATTSDVDSDNEDDDDNEEDDEETNENEEEEEEEEEEDDEDDDDGPPVLSPIMPLLPENESEEYSGTTDRTRHKLSPMVSLSIAKDLEECEITEIPNDTDNVSNTVNFFAANNNDLPVTWDENLDGNVINNDDCNSDAGNREKNEELDKEYVKIEVNEGDFEEDSMDENVVDNREDDGDNQVHEVHNLDGTVLMVTNDAEGNQILIERNVLDIDNEDSNIEAAQYIYPENTYEIEEEDYPTRNETDVMQTDEMQGSMSYVQDTSENEDSMQNDIEENSDVQKQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01476424;
90% Identity
iTF_00015543;
80% Identity
-