Ppyg007388.2
Basic Information
- Insect
- Protodeltote pygarga
- Gene Symbol
- lrrfip2
- Assembly
- GCA_936440985.2
- Location
- CAKZFI020000054.1:7083759-7098093[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.13 1.3e+03 -1.4 0.3 57 91 68 103 34 107 0.55 2 3 1.1e-79 1.2e-75 254.9 28.3 1 297 123 403 123 405 0.93 3 3 2 2e+04 -5.6 16.4 1 48 402 448 402 476 0.72
Sequence Information
- Coding Sequence
- ATGGGGCATCGCTCTGAGGTAGCTACGCCTGATAATAGTGACGAAGAAAGCGGTGATGCCTTCACTGACGGTGATTTTGGGGATTCAGATGATGAAACCGTCATCGAGCGCCACGACAAAACGGAACCGTCTCACATGCCCATCAACGAAACAGTGAACGAGGACATCCAGAAAAGTGTTACCACCAATGGCCACTTAAATGGTGATGCGTTAAAGGAGCAGCCTATAATGAACGGCCGTAAGAATAGTGAGAGTCAGTCAAGTGATGTGGAAAACCAAAGCTTAGTGCTAACGGATTTGCGTCGAGATTCACACGGCGATCAGAATCCTTCAATAGTGGGCATCCTCGGTGATCAGCAGAACCATGCAGAGCAGAGATTAGCAGCGCGGCGAGCAGCCCGGGCTGAAGCGCGTGAGATTCGCATGCGCGAGCTAGAGAGACAGCAGCGCGAACAGGAGGACCATGCGGACAAAGCGTACGACATGTATGCGGGTAAGACGCCAGAAGCGGTGGGTCGTCGCGGCGGCACGCGGCTGGCGGCGCTGAGCCCGGCCGGAGTGCACTCGCCGCGACGCAGCTCCGAAGACTCTGCCGATGATGCTTTCAGCATCAAGGACCTTAGGCACGAGTTGAAAGAGGTGGAGGAGAAGTTCCGCAAGGCAATGATCTTGAATGCGCAGCTGGACAACGACAAAGCGGCGCTCGGTTACCAGCTTGAACTGCTCAAGGACAGGATAGAGGAGCTGCACGAAGAATATGCACAGTTACAGCGCGAGCACAAAGAGAAGTGCTCATCGTTCGAGCGGCTGCGGCGCGAGCACGAGTCGCTGGTGCGCGAGCTGGGCGCGGCGCGGGCGGCCGTGGCGGCGCGCGACGCGGCGGCGCGGGCGGCGGGCTTCGCCTTCGTGGACGCCGAGCGCGAGCAGGCCGGCCACGCGCCCGCGCTGGCGCTCGTCAGCCAGCACGCCGAGCAGCTGCTCAACGACGCCGGGGAAGGAACTCTCGACGTGCGGTTGCAAAAACTCCTAAGTTCGAAGCAGGCGCTTGAATCAGAAGTACGCAAACTGAAGCTACAACTAAACGAAGAGCGCGCCGCCAGGCAGAACGGAGTCTCCAACCACCACGAACATGAATACGAAAACGAACTGGAGACGGTGCGCAAGTCAGTATCGGAGGCGAAGGCCCGCGCTGCACGCGCTGAGGCCGAGGCCGCGTTGAACGCCGCCCATGTCGCGCGCCTCGAGGCGCAGCTAGCGAGGCTGCGCGCCCGCCAGGACCACCAGGACGAGCACGAGGAGCAACTCAAGCAGGAGCGACGACGTCTGCAGAGAGAGGCTCGAGAGGCGTTGAACCGAGTTGAAGAACTGGAAACAGAAAACAGCCACCTCACCAAACGACTAGATAAACTTAAGAACGCCAAATCCGCACTTCTTAAAGACCTGTGA
- Protein Sequence
- MGHRSEVATPDNSDEESGDAFTDGDFGDSDDETVIERHDKTEPSHMPINETVNEDIQKSVTTNGHLNGDALKEQPIMNGRKNSESQSSDVENQSLVLTDLRRDSHGDQNPSIVGILGDQQNHAEQRLAARRAARAEAREIRMRELERQQREQEDHADKAYDMYAGKTPEAVGRRGGTRLAALSPAGVHSPRRSSEDSADDAFSIKDLRHELKEVEEKFRKAMILNAQLDNDKAALGYQLELLKDRIEELHEEYAQLQREHKEKCSSFERLRREHESLVRELGAARAAVAARDAAARAAGFAFVDAEREQAGHAPALALVSQHAEQLLNDAGEGTLDVRLQKLLSSKQALESEVRKLKLQLNEERAARQNGVSNHHEHEYENELETVRKSVSEAKARAARAEAEAALNAAHVARLEAQLARLRARQDHQDEHEEQLKQERRRLQREAREALNRVEELETENSHLTKRLDKLKNAKSALLKDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00907905;
- 90% Identity
- -
- 80% Identity
- -