Basic Information

Insect: Protocalliphora azurea
Gene Symbol: RREB1
Assembly: GCA_932273785.1
Location: CAKNZW010000366.1:877365-883432[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.03 1.6 9.6 1.7 1 21 235 255 235 257 0.95

2 13 0.00051 0.027 15.1 0.2 1 23 267 289 267 289 0.98

3 13 3.5e-05 0.0019 18.8 7.5 1 23 295 317 295 317 0.98

4 13 0.83 45 5.0 0.4 2 23 555 578 554 578 0.91

5 13 0.17 9 7.2 4.4 2 21 584 603 583 604 0.93

6 13 0.057 3.1 8.7 0.1 1 23 744 766 744 766 0.97

7 13 1.7e-05 0.00093 19.8 1.2 1 23 776 798 776 798 0.99

8 13 0.0013 0.068 13.9 2.0 1 23 804 827 804 827 0.97

9 13 0.0045 0.24 12.2 2.0 1 23 1181 1204 1181 1204 0.95

10 13 0.00027 0.015 16.0 1.0 3 23 1545 1565 1543 1565 0.97

11 13 0.22 12 6.8 6.3 1 23 1571 1594 1571 1594 0.97

12 13 0.13 6.9 7.6 1.1 3 23 1771 1791 1770 1791 0.91

13 13 0.0015 0.081 13.7 5.7 1 23 1797 1819 1797 1819 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.03	1.6	9.6	1.7	1	21	235	255	235	257	0.95
2	13	0.00051	0.027	15.1	0.2	1	23	267	289	267	289	0.98
3	13	3.5e-05	0.0019	18.8	7.5	1	23	295	317	295	317	0.98
4	13	0.83	45	5.0	0.4	2	23	555	578	554	578	0.91
5	13	0.17	9	7.2	4.4	2	21	584	603	583	604	0.93
6	13	0.057	3.1	8.7	0.1	1	23	744	766	744	766	0.97
7	13	1.7e-05	0.00093	19.8	1.2	1	23	776	798	776	798	0.99
8	13	0.0013	0.068	13.9	2.0	1	23	804	827	804	827	0.97
9	13	0.0045	0.24	12.2	2.0	1	23	1181	1204	1181	1204	0.95
10	13	0.00027	0.015	16.0	1.0	3	23	1545	1565	1543	1565	0.97
11	13	0.22	12	6.8	6.3	1	23	1571	1594	1571	1594	0.97
12	13	0.13	6.9	7.6	1.1	3	23	1771	1791	1770	1791	0.91
13	13	0.0015	0.081	13.7	5.7	1	23	1797	1819	1797	1819	0.99

Sequence Information

Coding Sequence: ATGTTAGTCGCCACAAATAACCCACAAACTGCCCAACAAAATAGTCCCAAAAATACCAGAGCTAATACGCCTATTAAAATGGAAAGAAGAGATTCTTCCTCATCTTATTCATCTTTGGAAGATTTGGAACAGGAAGGTAAAAAACTAAATGCCGTTACCTCTACACCTGTGGTAACCAGTGATGCCACCATTTCGTGCGGTGTTAGTTCTATAACAAATGCCAGTATGAGATCATCACAGAGGCCAGATATATCCGAACAACAGCATCATAACCAGCATCAGCGTATGCAGGAATCCGATGAACCTAATGACTATGATGAGGATGAATCGGCTGATGAGAAATCTTCACAGCCACGTCAGCTTTTACACTACAAACGTCGTCTGAGTGGTCGCAGTATAGCGGATAAAACAGCCAGTGTTCTATTGGAGTATAACGCTGATAATCCTAATTCTTTGCGCAAAAAATTCCGTTTTAATCGTTTTGTCCAAAACAATGGCGATGAGTCGGGTTTCGTTGATGCCAGTAACAATAGCCAATCGACAGTGAATAACTCTTCTTCACTGTTGGGCAACAATAACACAAATCAAACAAATTCGAATAGTGTTTCAAAATCAAATAGTTCTTCGGATACCTCCTCACCACCTCAAAGTAATGGTAATTCTAGTCCTGAATCTGGTATTGGAGAGCGAGAGGATATGAAATATATGTGTCCCATCTGTGATGCAGTTTCACAAACCGCCCATCAATTTACAAATCATATACGTTGTCACAATTACGCCTCGGGTCATACGGAGAATTTTACCTGCCGTATATGCTCTAAGGTGCTCTCATCTGCCTCATCATTGGATCGTCATGTTCTAGTGCATACGGGAGAACGACCATTCAATTGTAAATATTGTCATCTCACATTTACCACAAATGGAAATATGCATCGTCATATGCGTACCCATAAACAGCATCAGCATACTCATCATCGTCGTAACTCGAATGGAACAAAGTTCAACTCAAACAGCAACAACAACAATAGTAGTAATAATAACTATAATAGCTGTAGTAGTAATAACAATAATACAACGACAACGATAACAACAACAACAACACCAGCTGTAAGTAAAACCACATTAAGTAATGGACAATTAAATGAAGGCGTTAAATTATCAACAACACAAGCAGCAGACACCACAACTTCAACTTCAACGCCAACGTCAACAACAGCAGCCAACACAACAACAATAACAACCAACTCACCATCTGCCAACAACTTCAACAATAATAATGCTTCTGACAATGATTGTAATCAAAAGTTTACAGGTGCTAATGACAAACGATTAAATGGTAACGCCAACTTAGAAAGTTATGAAAGTGATGGTGGCTGCTCATCAGATTCATCAGCAGGTCGTGTTTCCAACAGCAACAATAACAATAATAATAACGATAACCAAAATAACAACAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATGATTTGAAAATTAACAATAATAACTATAAACGTAAACATAGTGAAGATGATCACGCTTCTCAAGACCTAGTCAATTCAGGTGAAAACCAACATGAACTTTTAAAGAGATGTTTAAGAGCAGAGAATAATAATTCTATCGAAAATAATACCACAAATGATGAAGTCGTTTGTCCCGTTTGCAATGATAGTGATTTTTCGAATAATCACGAACTTGATCAACATATGGACAGTAAACATCCCGAAATAATGGTCAAATGTAAACATTGTGGTGTTTATTTCCGCAGTCATCAACAGCTTAGTTTACATTATTGCTCAGCCGATGTCAAGGGTTCTGTTAATTTAAGCGTTAAACAAAGACGTTTAAGTGAAACATCCTACCAGCCTAAGCCTGTAGATGATTCTGAGGAGCAAGACGATCACTTAAGTAAAAGTCATGAACTGTTTCAACATTTTAAAAATGCAATGACTTCTAATAATTCTTCCTCATCGCAATTCAATCAAGATCTTACTGAGGATGATATTAAATCGGAACCTTCAGCTCATGATTCCAAAGATTTAGCTGACATACAATCGATTTTGAATATGACAGCCTCATCAAGCAACTCAAATTTACTCCGGAACTTTGAACAGTCAGTCAACACTCCCTCTTCACAATGCAGTTATGACAGGGATGAAGAAGAAGCTCAAGATGCTTTTACCTCAGAATTCCGTAAAATGAAACTGCGTGGTGAATTTCCCTGCAAGCTGTGTACGGCAGTGTATCCCAATTTACGTGCTCTTAAAGGCCACAATCGTGTGCATTTGAGTGAGGTTGGACCAGCTGGTCCTTTCCGTTGTAATATGTGTCCTTATTCGATATGTGACAAGGCCGCTCTCATACGTCATATGCGTACGCATAATGGTGATCGTCCTTATGAGTGTGCTGTATGTAATTATGCCTTTACCACCAAAGCCAATTGTGAAAGACATTTGCGTAATCGTCATGCCAAAACTACACGTGAAGAAGTTAAACGTGCCATTATATATCATCCTTCAGAAGATTCATCTTGTGATGATACTAGCAAAAAGTTACATATGTTCTCATCGGAATTAGAAGATGATTGTGATTTAATTTCTTATCATCAACACCAGCCCAAAGATCGTTCCACCCCCGTGTCTCATCTTAAGGAAAGATTGATTTCAGGTGATAGTCCCTCTTCAAAACCTGTAAAGATCCAGGTAAAAAATCTTGAAGAATTGTTAGATAAATCAACTGCTTCATCAGGTTATCATGATAGTTATGATAAACGTAACATAGATACTTCTCAAGCTCCTATTGATATGAGTATGGATGTTTTGGATTTGAGTAAAAAACCCAGTGCTAGTGCTCCGGTTCCAGTGCAAGAAGAAAAGATAGAAACATCTATACCTCTGTTAACATTACCTAAACCTGCCGTCGCTCTAAACAATGAAATAAATGGCGGCAAAATCCTACCCACAGAAGCTGATCCAAAACTGGATATCTCTGCTTTGGATAAACAGCAACAACAGTTGCTTTTAGCTCAGCAACAATTGCTCAGTGATCCAAATCAATTAATGCAACAATTGTATCGTAATCTTTTGTTTCCTCAATTCCCGCCCTTCTTCATGCCCAACACCTTTATGAATACAAACTTTAGTGATTTTCAAAAACTTGCTCCTCTGTTAACACGCATGATTGGTGGGGTTGCTGCAGCTGCAATGCCAAATAACGATATTGAGAAGCCTTCTACCCTAACTACACCTCTGAATCCTAATAACTCTCCAAGTTTGTCACAAATGAGTCCATTAATGTCGGAAAAATCTAACTCGGCAGCAATGGCTTCAATGTCATCACCCAAAAATCTACTTTCACCGAATCCAAATCATTTGTCTATGCCTAGACATATGATGGGCGCAACTGCTCCTTCTCATCCAGCAAATCTGCCACCCACAATGCTTTCAAATGGTCCCGTCAAAATGGTGCTCAAAAATGGTGTGTTCATGCCGAAACAAAAACAAAGACGTTATCGCACTGAACGTCCTTTTGCCTGTGAACATTGTTCAGCTCGTTTTACCTTACGCTCCAATATGGAACGTCATGTCAAACAACAACATCCCCAATTCTATGCTCAACGCCAACGTAGTGGTCATCATGTTATGCGCGGTCGGGGAGCCAGCAGTGCTGCTAATATGAACAGCATTTCGCATTTGCAAGCAGCTATGGGTCAGACTCATTATAGCTCTACACCAAGTTCGATGAGTTCCCATTCACCCATTTCTGATCAGGTTAAATGTGCCATACTCGCACAACAACTTAAGGCACGCAAAGACACCGATCTGCTGCAACAAGCCCTGGCTCATGGTTCTAACAGTGTAGCCAATGCAAATATATTTTCACAACAAGCACCCAACCTCAACAATGGACAAACACCATTTTTTAGCTTTAATCCTCATCATGGACATCATCTAAGTCAAAATGGCACACCAAACGGCTCCATGGAAGATGATGAACCCAAGTTAATAATCGATGAAGATGACGAAGAGGAGGAAGAAGATGAAGAAGATATTGAAGAAATCCCCGACGATCATGAAGAAGACGAAGATCATGATGTAATGTTAAATGAAAGCCAAGATAAGTTAGAGGCTGAACATTTACCCACTACTGTTGAAGAAGTTAAGCTCAAATCAGATGAACCCCAAGAATCGGCGAAGAAAGTGGCTGAGTCAATATTGGAACAAGCAATTAAAGCTAGACAAAATATAAGTTCCTTTGCTAAAATTACACCGGAACCAACTGCTGCAGTAACTTCTAACAATAATACCATGAAATCCATGATTGCTCAAGCTCCTGCAGTAGGTAAATTTTTAAAGGAAGTGGCAAGTTCTTCATTTAAAGATGAATCACAAGATTTAGTTTCGGTGTCCGAATTAGTTGATAATGCCACCAATAACGCAGTATCATTCAACAACTATTTCCGTCCTTCAGATGTGGCCAATCATATGGAGCCTAGCGATGAAGATGGTTTAGTAGCATCTTCGGCCAGTGAAAGCAACAATTCGGGAGCCGAAGATACTGTAAGTACTGAAAAACCTAAAAAGAAATCTGCCTACAGTTTGGCACCCAATCGTGTGCACTGTCCCTATTGCCAACGCATGTTCCCCTGGTCCAGTTCCTTAAGAAGACACATACTCACCCATACGGGACAAAAACCCTTCAAATGCTCACATTGTCCTCTTTTATTCACCACCAAAAGTAATTGCGATCGTCATCTTTTGCGCAAGCATGGAGATGTAGAGTCTGCTGTATCGGTGTATGTACCAACCGAAGATGTTTCTGAACCTATTCCTTTGCCTAAATCTGTTGAGGAAATAGAGCGCATGCAAAGAGAACGTGAGGAAGAAGAGCGTAAACGTAAGGCGGAAGAACAAAGAGAACGTTTGGAAAAAGAGCAAATGGAAAAGCAAAAAATTGAACACGAACAGCAGCAGAAACAAGCTTTCTTAAAACACTTAGCTGTAGCACAATTTCAACAACAATTCAGCCAAAAACCCGAAACTAATCCAGTATCTTCTTCAGAACTGCCGTTTAAGTGTCACTTGTGCGAAAGTTCATTTGCTGAACGCCTACAATGTTTGGAACACATCAAATCTTTGCACGCCCAAGAGTTTGCTCTACTACTGTCGAAGGGAGCCATTGAAAATGAAGCTGATTCAGCCCAAATGACTTCGAATGAGGAAGATGAACGCCAACGTTCCAACGAAGATGCTGGAAAAAGTGGCAAGTATCCCGACTACAGTAATCGTAAAGTCATTTGTGCCTTTTGTATGAGACGTTTCTGGTCAACCGAAGATCTCCGTCGACATATGCGTACCCACTCTGGCGAAAGACCTTTCCAATGTGAAATCTGCTTTAGAAAATTCACCCTTAAACACAGTATGCTAAGACACATGAAAAAACACAATGGTCATCACATGAACGGCAGCCAATCGAATAGTGACAACTTAACCAATGGCAATTCTGGCTCTGACTACTCCGATGATGAACAAAGTCCAAACTCATTGCCCGCACCTGCCATGCCATTGCCCAGTGCCAGCATTAATGCATTATTTATGGGTTCAAAAATCCAAGAATTGTTAAACAAAGCAAACGAATGGAGAAATGGTAGTTTGAATGCAATGCGAGATGGTAAAGAAAACAACTCGGAGGAAACAAACACACCACAATCATCAGATTTAATTGGCAATTTGTTGGGTATCAGCGACCAGGGTATATTAAACAAATTGATGTCATCACCAGATGAAGCGGCCAAATTTTTGGGTGTAGAAAAGTAA
Protein Sequence: MLVATNNPQTAQQNSPKNTRANTPIKMERRDSSSSYSSLEDLEQEGKKLNAVTSTPVVTSDATISCGVSSITNASMRSSQRPDISEQQHHNQHQRMQESDEPNDYDEDESADEKSSQPRQLLHYKRRLSGRSIADKTASVLLEYNADNPNSLRKKFRFNRFVQNNGDESGFVDASNNSQSTVNNSSSLLGNNNTNQTNSNSVSKSNSSSDTSSPPQSNGNSSPESGIGEREDMKYMCPICDAVSQTAHQFTNHIRCHNYASGHTENFTCRICSKVLSSASSLDRHVLVHTGERPFNCKYCHLTFTTNGNMHRHMRTHKQHQHTHHRRNSNGTKFNSNSNNNNSSNNNYNSCSSNNNNTTTTITTTTTPAVSKTTLSNGQLNEGVKLSTTQAADTTTSTSTPTSTTAANTTTITTNSPSANNFNNNNASDNDCNQKFTGANDKRLNGNANLESYESDGGCSSDSSAGRVSNSNNNNNNNDNQNNNNNNNNNNNNNNNNNNDLKINNNNYKRKHSEDDHASQDLVNSGENQHELLKRCLRAENNNSIENNTTNDEVVCPVCNDSDFSNNHELDQHMDSKHPEIMVKCKHCGVYFRSHQQLSLHYCSADVKGSVNLSVKQRRLSETSYQPKPVDDSEEQDDHLSKSHELFQHFKNAMTSNNSSSSQFNQDLTEDDIKSEPSAHDSKDLADIQSILNMTASSSNSNLLRNFEQSVNTPSSQCSYDRDEEEAQDAFTSEFRKMKLRGEFPCKLCTAVYPNLRALKGHNRVHLSEVGPAGPFRCNMCPYSICDKAALIRHMRTHNGDRPYECAVCNYAFTTKANCERHLRNRHAKTTREEVKRAIIYHPSEDSSCDDTSKKLHMFSSELEDDCDLISYHQHQPKDRSTPVSHLKERLISGDSPSSKPVKIQVKNLEELLDKSTASSGYHDSYDKRNIDTSQAPIDMSMDVLDLSKKPSASAPVPVQEEKIETSIPLLTLPKPAVALNNEINGGKILPTEADPKLDISALDKQQQQLLLAQQQLLSDPNQLMQQLYRNLLFPQFPPFFMPNTFMNTNFSDFQKLAPLLTRMIGGVAAAAMPNNDIEKPSTLTTPLNPNNSPSLSQMSPLMSEKSNSAAMASMSSPKNLLSPNPNHLSMPRHMMGATAPSHPANLPPTMLSNGPVKMVLKNGVFMPKQKQRRYRTERPFACEHCSARFTLRSNMERHVKQQHPQFYAQRQRSGHHVMRGRGASSAANMNSISHLQAAMGQTHYSSTPSSMSSHSPISDQVKCAILAQQLKARKDTDLLQQALAHGSNSVANANIFSQQAPNLNNGQTPFFSFNPHHGHHLSQNGTPNGSMEDDEPKLIIDEDDEEEEEDEEDIEEIPDDHEEDEDHDVMLNESQDKLEAEHLPTTVEEVKLKSDEPQESAKKVAESILEQAIKARQNISSFAKITPEPTAAVTSNNNTMKSMIAQAPAVGKFLKEVASSSFKDESQDLVSVSELVDNATNNAVSFNNYFRPSDVANHMEPSDEDGLVASSASESNNSGAEDTVSTEKPKKKSAYSLAPNRVHCPYCQRMFPWSSSLRRHILTHTGQKPFKCSHCPLLFTTKSNCDRHLLRKHGDVESAVSVYVPTEDVSEPIPLPKSVEEIERMQREREEEERKRKAEEQRERLEKEQMEKQKIEHEQQQKQAFLKHLAVAQFQQQFSQKPETNPVSSSELPFKCHLCESSFAERLQCLEHIKSLHAQEFALLLSKGAIENEADSAQMTSNEEDERQRSNEDAGKSGKYPDYSNRKVICAFCMRRFWSTEDLRRHMRTHSGERPFQCEICFRKFTLKHSMLRHMKKHNGHHMNGSQSNSDNLTNGNSGSDYSDDEQSPNSLPAPAMPLPSASINALFMGSKIQELLNKANEWRNGSLNAMRDGKENNSEETNTPQSSDLIGNLLGISDQGILNKLMSSPDEAAKFLGVEK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00260066;
90% Identity: iTF_01261338;
80% Identity: -