Pinq024255.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Prosopocoilus inquinatus
Gene Symbol
-
Assembly
GCA_036172665.1
Location
CM069876.1:47332663-47349130[+]

Transcription Factor Domain

TF Family
zf-GAGA
Domain
zf-GAGA domain
PFAM
PF09237
TF Group
Zinc-Coordinating Group
Description
Members of this family bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 30 0.31 1.8e+02 3.3 0.4 21 51 88 118 76 121 0.87
2 30 0.043 25 6.0 0.0 21 49 144 171 136 175 0.91
3 30 2.3 1.4e+03 0.5 0.3 25 44 176 195 169 199 0.86
4 30 2.7 1.6e+03 0.3 0.0 20 44 202 226 187 231 0.84
5 30 0.00061 0.36 11.9 0.4 21 45 231 255 218 260 0.90
6 30 1.6 9.2e+02 1.0 0.0 21 44 262 285 257 290 0.89
7 30 0.075 45 5.2 0.1 21 45 290 314 278 317 0.89
8 30 0.68 4e+02 2.2 0.1 21 43 319 341 316 344 0.92
9 30 4.8 2.9e+03 -0.5 0.1 22 49 408 435 395 440 0.82
10 30 0.34 2e+02 3.1 3.1 7 49 449 491 446 496 0.93
11 30 5.4 3.2e+03 -0.7 0.0 23 50 499 526 492 528 0.82
12 30 0.12 70 4.6 0.5 20 48 609 637 595 642 0.79
13 30 1.8 1.1e+03 0.8 0.0 20 43 673 696 670 701 0.90
14 30 0.013 7.6 7.7 0.2 17 49 698 730 695 735 0.83
15 30 4.6 2.7e+03 -0.5 0.1 21 45 730 754 726 757 0.88
16 30 1.1 6.3e+02 1.5 0.1 23 51 797 824 787 825 0.83
17 30 1.2 7.2e+02 1.4 0.1 21 44 851 874 848 883 0.81
18 30 0.053 31 5.7 0.1 14 44 940 970 930 977 0.80
19 30 0.43 2.5e+02 2.8 0.1 21 48 1080 1106 1054 1112 0.92
20 30 0.027 16 6.7 0.4 21 52 1176 1207 1173 1208 0.88
21 30 0.15 91 4.2 0.1 23 44 1206 1227 1201 1231 0.88
22 30 0.13 75 4.5 0.2 21 48 1232 1258 1228 1263 0.88
23 30 1.1 6.7e+02 1.5 0.1 18 44 1257 1283 1256 1287 0.88
24 30 0.0022 1.3 10.2 1.5 26 48 1462 1483 1447 1488 0.79
25 30 0.55 3.3e+02 2.5 0.2 22 46 1486 1510 1482 1516 0.84
26 30 0.13 74 4.5 0.0 21 47 1513 1539 1510 1544 0.86
27 30 0.1 60 4.8 0.0 22 44 1542 1564 1539 1569 0.90
28 30 2.2 1.3e+03 0.6 0.2 22 44 1570 1592 1567 1596 0.89
29 30 0.68 4e+02 2.2 0.3 23 44 1632 1653 1623 1661 0.82
30 30 0.0027 1.6 9.9 0.1 20 52 1685 1716 1678 1718 0.86

Sequence Information

Coding Sequence
ATGCCAGTGAAAACTATATTCAATTTGATAGGCTCTGCTGATAACTTAAGGACGAGGATCGAATGGGAATGGGTCCCTAAATCTATAAGCATCGGCGCAAATACCTTCAAATGCCACGCATGCGCTTCCACATTCAAGTCTTACATTCGCATGCGCCGACACATgctgacgcacaccgacgagacgCAATTCACCTGCGACTTCTGCGATTACAAACACCGACAGCGCGCGAGACTGAAGAGCCACATgttaacgcacaccggcgagaagccgttgaGCTGCCGCCACTGCGATTTCAAATGTCGCGAGGCCGGAAGCTTAAGGCGACACACGTTtttacacaccggcgagaagccgttcgcttgCGACGTTTGCGATTACAGGTGTCGAGAAGTCGGGAGACTGAAGGCGCACGCGCTAACGCACACCGGAGAAAAGCCGTTCGCctgcgacctctgcgattatacaTGCAGGGAATCCGGAAAGCTGAAGCAGCACATGTTGAGGCACGTCGGCGACAAGTCGTTCAGCTGTGATttctgcgattacaagtgccgccAGCCCGGGACGTTAAGGCGACACACTTCAACGCATACCGGGGAGAAGACGGAGAAACCGTTCGGATGTGATTTATGCGATTATAGGGGTCGAGAACCTGGCAGATTGAAGCGGCACATgttgatacacaccggcgaaaagccgTTTAGTTGCAcgctttgcgattacaagtgccgtcAAGCCAGGACGTTAAAACGCCACCTGTTGATGCACACcggggaggaggaggagaagccGTTTCGCTGTGATTTGtgcgattataagtgtcgaGAGCCTGGGAAATTGAAGCGACACATGTTAACGCAcacgggcgagaagccgttcagttgtaccctctgcgattataaatgtcgacagtcCGTGAGATTGAAGGAGCATATGATGATACACAACGGCGATGAGAAGCCGTTAAGCTGccacctttgcgattataaatgccgacaggcCGGTATGTTGAACAGgcacaagtaCTCTGCGATTTCCGAGCCTGCAAACCCACCGAAGGTGTATTTACCGAATTACGTTTACTTGAGCGACCTGAAGCCTTACACGTGTCCACCGATCGCAGTCGAGCCGAACGAGAGGTTCTTCAGCTGCGAGCTGTGCAGTTACAAAAGCCTGTTCAACAAAAATTTACGGGCGCACAAGTTAGCACACTCCAACGATAAGCCCTTCCCCTGCGACCGTTGCAGCTACAGATTTCGCACCGCCTCAAAGTTGAGACAGCACATGCGAGCGCACACCGACGATAAACCGTTCGTGTGCGACGAATGCTCGCTAGCATTCAAGCACCCCCAGAGTTTAAAAAAGCACAAGTtaaaacacaccggcgagaaatcGATCGCTTGCGAACaatgcgattacaagtgccgacGTCCGTCGGAAATGAAACGCCATGTTATGTCAAGACACACCAACAGGAAACATACCGATGCGAAGCCGCTAAACTGCGAGTTCTGCGATCAGAAATTCAAACACGATTTCACTTTGAAAAGGCACTTGTTGATACACACCGGCGCGAAGTCGTTCGCTTGCgaactttgcgattacaagaGCCGACGTCCGACCGACCTGAAACAGCACAAGGTGATAATGCACAACGCTGAGAAGAAGCCGTTTAAATGCACGTTTTGTGACTACGAATGCGTGCTGCGCGCTTATCTGAAGCGGCATATGCACACGCACACCGGCGAAATGCAGAGGTGTCACCTTTGCAATTACCAGAGTACTCGGCCCGGAAGTTTAAAGTCGCATCTGTTGAAGCATTCCGAAGAGAAGCCTTTTAAGTGCGAACATTGTACATATGCAAGCAAGACGTCTAGACATTTAAAAGTGCACATACGAGTGCATCATGCTAAAGAAAAACCACAGCCGTCTGAGATTTCCTGGGTATCATGTGATTCCGAGTACGTATTGCTGAATGACCTGAAGCTTTACACAGTCGAACCAATCAAAATCAAGAGCGAGAAGTCTTTCAGCTGCGAGCTCTGCGACTACAAAACCCGCTTCGCCGGAAACTTGAGGGCGCACAGGGtgaaacacaccgacgagaagcccttCCTTTGCGACCGTTGCAGCAGCACGTTTCGCACGGCCGCTAATTTGAGGCAGCACATGCGAACGCACGCCGCCGATAAGCCGTTCAGCTGCGAGCAGTGCGCTCGAACGTTCAAGCGACCCGAAAATTTGAAAGCGCACTTGTCAAAACATAACCTCGAAAGTTCGAGGAAGGCGCGCGCCGGCAAAGTGCAGTACATTTGCGAACGGTGCGGTTACAAGTGCGCCACGGCTTCGCTTTTGAAGCAGCACATGCGAAAACACGCCGACGGCGAACCGCTGACTTGCGAGCTGTGCGCTCAGAAATTTAAACACCTCGTGACCTTGAAAAGGCACATGTTGATACACAGCGCGAAGCAGTTCAGTTGCgaactttgcgattataagAGCCGACGTATAACGGACATGAAGCAGCACAAGATGATAATACATAACGACGAAAAGCCGTTCAAGTGCGATGTTTGCGACTACGCGTGCGTGCTGCGTTCGTATTTGAAACGGCACATGTATACACACACCGGCCAAAGACACAAGTGCCATCTTTGCAGTTACGAAAGCAGCCGGCCTGGAAGTTTAAAGTCGCACTTGTTGAGGCATTCCGAGGAGAGGCCCTTTAAATGTCACGAGTTAACACGCACCGAAGGGAAGTTGCTCTGCTATGACAGGTACCAATACAGAAACCCAAATCCCAGCAAAATTAAACGACACAGGATAACACACGCCGACGAGAAGCCTTTCACTTGCAACATTTGCGATTACAAATTCCAACAGAAATCGAGTTTGCAGGAGCACATGTTATGGCACACCAGCGAGAAGCGTTCGGTTTGGAATTATAGTTACAGTTCCCGAACAGAAACAATGAATAACCCCTCAAGGAAGCTGTTCACTTGTGATGCATGCTGTCGAAGGTGTCGGTCTCGGGAGCACCTGACGCAGCACATGTTGCAGCACACCAACTTGATGTCGTTCAGCTGTAATCTCTGCGATTACGATTGTCCCGACCGCGCGGAACTGAACGCGCACATGTTGAAACACACAGGCGATAGGCCGTTCAGTTCTGACGTCTGCGGTTGCAAATTCAAGCAGTCGGGTCATTTGAAAACGCACGCGTTgatacataccggcgagaagccgttcggttgtaaATTCTGCGATTACAGGTGCCGATCGGGGGGGAACTTGAAGAAGCACGTGCTGAGACACGGCCCGAGAGAAACTGTCGACTTGCGGATCCTTGCTAAATCCCGCAAGACTGCTTCAACCAAGGACTTGTCCCGCAAACAACTTCCTGAAAATAAATTGGACGAGCCCAAGAAGCAGTACAGCGCCAGCCTTCGGTACTCCTGCACTTTTTGCGATTACAAAACGAATTATTCGTGCCACTTAAAGTATCACATCTacacgcacaccggcgagaagccctACGTCTGTCTGGTTTGTGACCGGAGATTCAATCAGCCGTATAATTTGCGGCAGCACCTGCGCACCCACACCGGCGCGAGGCCGTTCCAGTGCGAGGTATGCGGCTCCAGTTTCCGCCAGGGTCACCACTTGAGAGATCACATGCTGAAGCACACCGACGAAAAACCCTACATCTGCGGGATTTGCCAGGCGAAGTTCAAGAGGGCCGAGTATTTGCAGCAGCACATGATCAGGCACACCGGGGAGAGGCCCTTCGAGTGTTCCGTTTGCTCGGCGAAGTTCGCGCGGAAGGTCACGATGCGAGAGCATCTGGCCGGTCACAGTGACGAGACGCCTTTTGAGTGCATGCTCTGCGAAAAGAAGTTTAAGACGAAGAGATCTTTGAAATGGCATGTGGCCTCGCATACCGAGACGAAACGTTATAAGTGTGACCAGTGCGAGTCTAGGTTTCGTTCCAGATATCAACTGCAGCGCCACTCGCTCGTCCACGGCGAAGtttatttCAGATACCAGTTGCATACTGAGTATCAAATTAAGCCAGAACTCTGCGATAGTAAATACGAACATGCCCGAAACTTGAAGCAACACGTGCTGACACACACCGGCGAGACACAGTTCGGCTTCAGCGATTCTCGCTGCCAGGAAAAGAATAAATTGAGTCAGCACTCATCGACGTATACCGACGAAAAACAATGCAATTTCAGCGATTCATCCTGCCAGGGAAAGAAACAATCAACCCAGCACTCACCGGCACACACCGATGAAAAACAATTCAGTTTCGGCGCATCCtcctttcaaaaaaagaaaaaatcggctCATCACTCGTCGACACTTTCCAACGAGAAGCCTTGTCACCTTTGCAGTTGCAGCTACCGCCAATCTGGAAATTTGAGGCGGCACGTGTTGACGCACACCAATAAGAAGCCCTTCGCCTGTAaactttgcgattacaagtgccgacGATCGGAATACCTAGACCGGCACATGTTAATACACACTGACGAGAAGCCCTTCAGCTGTACCTTCTGCGACTACAAGAGCCGACAACAAGAAAACTTGAATGTGCATCTgttaatacacaccgacgagaagccgttcggctgcactctttgcgattataaatgccgacagaaCGGAACGTTGAAGCGTCACATGCTGACGCACACAGGCGAGAATCCCTTCAGCTGCGGCATGTGCAATTACGAATGCCGACGGATCGAAATCCTGAAGCGACACATgctgatacacaccggcgagaaggtTTTCAGCTGCGACTATTGCGATTACGAGTGCCGCCGGCCCGAGACTTTGGAGGAGCATGCGTTGACACACGCCGACCAGAACGAATCCCCATCGATGCCGATTAGTTGTGGCCTTTGCAATTATAAGTGCCGACATGCCGCGAAGTTGAAACGTCACATGTTAACGCACAcggacgagaaaccgtttaagtgcggtctttgcgattacaaatgccgccGGTACGATATTCTGCAGCAGCACATGTTCTCGCACACCAGCGAGAAACCTTTTAGTTGCAGTCTTTGCGAGTACAAGGGCAAGCGGTACAGAAATTTGAAGAGGCACATGTTAATACATGGGAAGAAGCCGACGGCAAGCACGCGTGagcacacaccgacgagaaacgcTTAG
Protein Sequence
MPVKTIFNLIGSADNLRTRIEWEWVPKSISIGANTFKCHACASTFKSYIRMRRHMLTHTDETQFTCDFCDYKHRQRARLKSHMLTHTGEKPLSCRHCDFKCREAGSLRRHTFLHTGEKPFACDVCDYRCREVGRLKAHALTHTGEKPFACDLCDYTCRESGKLKQHMLRHVGDKSFSCDFCDYKCRQPGTLRRHTSTHTGEKTEKPFGCDLCDYRGREPGRLKRHMLIHTGEKPFSCTLCDYKCRQARTLKRHLLMHTGEEEEKPFRCDLCDYKCREPGKLKRHMLTHTGEKPFSCTLCDYKCRQSVRLKEHMMIHNGDEKPLSCHLCDYKCRQAGMLNRHKYSAISEPANPPKVYLPNYVYLSDLKPYTCPPIAVEPNERFFSCELCSYKSLFNKNLRAHKLAHSNDKPFPCDRCSYRFRTASKLRQHMRAHTDDKPFVCDECSLAFKHPQSLKKHKLKHTGEKSIACEQCDYKCRRPSEMKRHVMSRHTNRKHTDAKPLNCEFCDQKFKHDFTLKRHLLIHTGAKSFACELCDYKSRRPTDLKQHKVIMHNAEKKPFKCTFCDYECVLRAYLKRHMHTHTGEMQRCHLCNYQSTRPGSLKSHLLKHSEEKPFKCEHCTYASKTSRHLKVHIRVHHAKEKPQPSEISWVSCDSEYVLLNDLKLYTVEPIKIKSEKSFSCELCDYKTRFAGNLRAHRVKHTDEKPFLCDRCSSTFRTAANLRQHMRTHAADKPFSCEQCARTFKRPENLKAHLSKHNLESSRKARAGKVQYICERCGYKCATASLLKQHMRKHADGEPLTCELCAQKFKHLVTLKRHMLIHSAKQFSCELCDYKSRRITDMKQHKMIIHNDEKPFKCDVCDYACVLRSYLKRHMYTHTGQRHKCHLCSYESSRPGSLKSHLLRHSEERPFKCHELTRTEGKLLCYDRYQYRNPNPSKIKRHRITHADEKPFTCNICDYKFQQKSSLQEHMLWHTSEKRSVWNYSYSSRTETMNNPSRKLFTCDACCRRCRSREHLTQHMLQHTNLMSFSCNLCDYDCPDRAELNAHMLKHTGDRPFSSDVCGCKFKQSGHLKTHALIHTGEKPFGCKFCDYRCRSGGNLKKHVLRHGPRETVDLRILAKSRKTASTKDLSRKQLPENKLDEPKKQYSASLRYSCTFCDYKTNYSCHLKYHIYTHTGEKPYVCLVCDRRFNQPYNLRQHLRTHTGARPFQCEVCGSSFRQGHHLRDHMLKHTDEKPYICGICQAKFKRAEYLQQHMIRHTGERPFECSVCSAKFARKVTMREHLAGHSDETPFECMLCEKKFKTKRSLKWHVASHTETKRYKCDQCESRFRSRYQLQRHSLVHGEVYFRYQLHTEYQIKPELCDSKYEHARNLKQHVLTHTGETQFGFSDSRCQEKNKLSQHSSTYTDEKQCNFSDSSCQGKKQSTQHSPAHTDEKQFSFGASSFQKKKKSAHHSSTLSNEKPCHLCSCSYRQSGNLRRHVLTHTNKKPFACKLCDYKCRRSEYLDRHMLIHTDEKPFSCTFCDYKSRQQENLNVHLLIHTDEKPFGCTLCDYKCRQNGTLKRHMLTHTGENPFSCGMCNYECRRIEILKRHMLIHTGEKVFSCDYCDYECRRPETLEEHALTHADQNESPSMPISCGLCNYKCRHAAKLKRHMLTHTDEKPFKCGLCDYKCRRYDILQQHMFSHTSEKPFSCSLCEYKGKRYRNLKRHMLIHGKKPTASTREHTPTRNA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01258264;
90% Identity
iTF_01258264;
80% Identity
iTF_01258264;