Pinq024255.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Prosopocoilus inquinatus
Gene Symbol
-
Assembly
GCA_036172665.1
Location
CM069876.1:47332663-47349130[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 50 0.44 27 6.4 3.8 1 23 36 58 36 58 0.99
2 50 0.26 16 7.1 4.4 1 23 64 86 64 86 0.98
3 50 0.94 59 5.4 5.0 2 23 93 114 92 114 0.93
4 50 0.14 8.5 8.0 0.4 1 23 120 142 120 142 0.97
5 50 0.0017 0.1 14.0 2.1 1 23 148 170 148 170 0.97
6 50 0.0014 0.087 14.3 4.0 1 23 176 198 176 198 0.98
7 50 0.075 4.7 8.8 0.1 3 23 209 229 207 229 0.97
8 50 0.0014 0.089 14.2 4.0 1 23 235 257 235 257 0.98
9 50 0.00025 0.016 16.6 2.7 1 23 266 288 266 288 0.99
10 50 0.0038 0.24 12.9 3.0 1 23 294 316 294 316 0.98
11 50 0.052 3.3 9.3 2.4 2 20 324 342 323 344 0.93
12 50 7.1 4.4e+02 2.6 1.2 1 23 383 405 383 405 0.92
13 50 2.7e-05 0.0017 19.6 1.5 1 23 411 433 411 433 0.97
14 50 0.00036 0.023 16.1 2.2 1 23 439 461 439 461 0.98
15 50 0.0018 0.11 13.9 1.6 3 23 469 490 467 490 0.95
16 50 0.0087 0.54 11.8 3.2 2 23 502 523 501 523 0.96
17 50 0.013 0.79 11.2 0.4 1 23 529 552 529 552 0.91
18 50 0.022 1.4 10.5 6.2 1 23 559 581 559 581 0.99
19 50 0.0082 0.51 11.8 2.6 2 23 587 608 586 608 0.97
20 50 0.0013 0.083 14.3 7.0 1 23 614 636 614 637 0.96
21 50 0.0046 0.29 12.6 0.7 1 23 678 700 678 700 0.97
22 50 5.3e-05 0.0033 18.7 1.4 1 23 706 728 706 728 0.95
23 50 1.5e-05 0.00093 20.5 0.8 1 23 734 756 734 756 0.98
24 50 3.7e-05 0.0023 19.2 2.1 1 23 771 793 771 793 0.98
25 50 0.0016 0.098 14.1 1.6 2 23 800 821 799 821 0.96
26 50 0.13 8 8.1 0.8 1 23 826 849 826 849 0.96
27 50 0.00033 0.02 16.2 2.9 1 23 855 877 855 877 0.99
28 50 0.0091 0.57 11.7 3.7 1 23 882 904 882 904 0.98
29 50 8.1e-06 0.00051 21.3 1.1 1 23 951 973 951 973 0.97
30 50 5.8 3.6e+02 2.9 8.1 1 23 1000 1022 1000 1022 0.97
31 50 0.00047 0.029 15.8 0.5 1 23 1028 1050 1028 1050 0.98
32 50 0.013 0.84 11.2 1.1 5 23 1060 1078 1059 1078 0.94
33 50 0.042 2.6 9.6 3.1 3 23 1086 1106 1084 1106 0.97
34 50 0.69 43 5.8 8.4 1 23 1152 1174 1152 1174 0.98
35 50 6.7e-07 4.2e-05 24.7 0.9 1 23 1180 1202 1180 1202 0.99
36 50 0.00022 0.013 16.8 3.5 1 23 1208 1230 1208 1230 0.98
37 50 5.8e-05 0.0036 18.6 0.3 1 23 1236 1258 1236 1258 0.98
38 50 0.018 1.2 10.7 0.1 1 23 1264 1286 1264 1286 0.96
39 50 0.0002 0.012 16.9 1.3 1 23 1292 1314 1292 1314 0.97
40 50 0.00068 0.042 15.2 2.3 1 23 1320 1342 1320 1342 0.97
41 50 0.33 21 6.8 0.2 5 23 1361 1379 1359 1379 0.94
42 50 0.0015 0.093 14.2 4.5 2 23 1462 1483 1461 1483 0.97
43 50 0.00087 0.054 14.9 2.6 1 23 1489 1511 1489 1511 0.97
44 50 0.00052 0.032 15.6 0.9 1 23 1517 1539 1517 1539 0.98
45 50 0.00061 0.038 15.4 3.3 3 23 1547 1567 1545 1567 0.98
46 50 0.083 5.2 8.7 1.4 1 23 1573 1595 1573 1595 0.98
47 50 0.00059 0.037 15.4 0.9 1 23 1601 1623 1601 1623 0.98
48 50 0.0034 0.21 13.1 4.1 2 23 1635 1656 1634 1656 0.97
49 50 0.16 9.8 7.8 3.9 1 23 1662 1684 1662 1684 0.98
50 50 0.0015 0.095 14.1 1.9 1 23 1690 1712 1690 1712 0.98

Sequence Information

Coding Sequence
ATGCCAGTGAAAACTATATTCAATTTGATAGGCTCTGCTGATAACTTAAGGACGAGGATCGAATGGGAATGGGTCCCTAAATCTATAAGCATCGGCGCAAATACCTTCAAATGCCACGCATGCGCTTCCACATTCAAGTCTTACATTCGCATGCGCCGACACATgctgacgcacaccgacgagacgCAATTCACCTGCGACTTCTGCGATTACAAACACCGACAGCGCGCGAGACTGAAGAGCCACATgttaacgcacaccggcgagaagccgttgaGCTGCCGCCACTGCGATTTCAAATGTCGCGAGGCCGGAAGCTTAAGGCGACACACGTTtttacacaccggcgagaagccgttcgcttgCGACGTTTGCGATTACAGGTGTCGAGAAGTCGGGAGACTGAAGGCGCACGCGCTAACGCACACCGGAGAAAAGCCGTTCGCctgcgacctctgcgattatacaTGCAGGGAATCCGGAAAGCTGAAGCAGCACATGTTGAGGCACGTCGGCGACAAGTCGTTCAGCTGTGATttctgcgattacaagtgccgccAGCCCGGGACGTTAAGGCGACACACTTCAACGCATACCGGGGAGAAGACGGAGAAACCGTTCGGATGTGATTTATGCGATTATAGGGGTCGAGAACCTGGCAGATTGAAGCGGCACATgttgatacacaccggcgaaaagccgTTTAGTTGCAcgctttgcgattacaagtgccgtcAAGCCAGGACGTTAAAACGCCACCTGTTGATGCACACcggggaggaggaggagaagccGTTTCGCTGTGATTTGtgcgattataagtgtcgaGAGCCTGGGAAATTGAAGCGACACATGTTAACGCAcacgggcgagaagccgttcagttgtaccctctgcgattataaatgtcgacagtcCGTGAGATTGAAGGAGCATATGATGATACACAACGGCGATGAGAAGCCGTTAAGCTGccacctttgcgattataaatgccgacaggcCGGTATGTTGAACAGgcacaagtaCTCTGCGATTTCCGAGCCTGCAAACCCACCGAAGGTGTATTTACCGAATTACGTTTACTTGAGCGACCTGAAGCCTTACACGTGTCCACCGATCGCAGTCGAGCCGAACGAGAGGTTCTTCAGCTGCGAGCTGTGCAGTTACAAAAGCCTGTTCAACAAAAATTTACGGGCGCACAAGTTAGCACACTCCAACGATAAGCCCTTCCCCTGCGACCGTTGCAGCTACAGATTTCGCACCGCCTCAAAGTTGAGACAGCACATGCGAGCGCACACCGACGATAAACCGTTCGTGTGCGACGAATGCTCGCTAGCATTCAAGCACCCCCAGAGTTTAAAAAAGCACAAGTtaaaacacaccggcgagaaatcGATCGCTTGCGAACaatgcgattacaagtgccgacGTCCGTCGGAAATGAAACGCCATGTTATGTCAAGACACACCAACAGGAAACATACCGATGCGAAGCCGCTAAACTGCGAGTTCTGCGATCAGAAATTCAAACACGATTTCACTTTGAAAAGGCACTTGTTGATACACACCGGCGCGAAGTCGTTCGCTTGCgaactttgcgattacaagaGCCGACGTCCGACCGACCTGAAACAGCACAAGGTGATAATGCACAACGCTGAGAAGAAGCCGTTTAAATGCACGTTTTGTGACTACGAATGCGTGCTGCGCGCTTATCTGAAGCGGCATATGCACACGCACACCGGCGAAATGCAGAGGTGTCACCTTTGCAATTACCAGAGTACTCGGCCCGGAAGTTTAAAGTCGCATCTGTTGAAGCATTCCGAAGAGAAGCCTTTTAAGTGCGAACATTGTACATATGCAAGCAAGACGTCTAGACATTTAAAAGTGCACATACGAGTGCATCATGCTAAAGAAAAACCACAGCCGTCTGAGATTTCCTGGGTATCATGTGATTCCGAGTACGTATTGCTGAATGACCTGAAGCTTTACACAGTCGAACCAATCAAAATCAAGAGCGAGAAGTCTTTCAGCTGCGAGCTCTGCGACTACAAAACCCGCTTCGCCGGAAACTTGAGGGCGCACAGGGtgaaacacaccgacgagaagcccttCCTTTGCGACCGTTGCAGCAGCACGTTTCGCACGGCCGCTAATTTGAGGCAGCACATGCGAACGCACGCCGCCGATAAGCCGTTCAGCTGCGAGCAGTGCGCTCGAACGTTCAAGCGACCCGAAAATTTGAAAGCGCACTTGTCAAAACATAACCTCGAAAGTTCGAGGAAGGCGCGCGCCGGCAAAGTGCAGTACATTTGCGAACGGTGCGGTTACAAGTGCGCCACGGCTTCGCTTTTGAAGCAGCACATGCGAAAACACGCCGACGGCGAACCGCTGACTTGCGAGCTGTGCGCTCAGAAATTTAAACACCTCGTGACCTTGAAAAGGCACATGTTGATACACAGCGCGAAGCAGTTCAGTTGCgaactttgcgattataagAGCCGACGTATAACGGACATGAAGCAGCACAAGATGATAATACATAACGACGAAAAGCCGTTCAAGTGCGATGTTTGCGACTACGCGTGCGTGCTGCGTTCGTATTTGAAACGGCACATGTATACACACACCGGCCAAAGACACAAGTGCCATCTTTGCAGTTACGAAAGCAGCCGGCCTGGAAGTTTAAAGTCGCACTTGTTGAGGCATTCCGAGGAGAGGCCCTTTAAATGTCACGAGTTAACACGCACCGAAGGGAAGTTGCTCTGCTATGACAGGTACCAATACAGAAACCCAAATCCCAGCAAAATTAAACGACACAGGATAACACACGCCGACGAGAAGCCTTTCACTTGCAACATTTGCGATTACAAATTCCAACAGAAATCGAGTTTGCAGGAGCACATGTTATGGCACACCAGCGAGAAGCGTTCGGTTTGGAATTATAGTTACAGTTCCCGAACAGAAACAATGAATAACCCCTCAAGGAAGCTGTTCACTTGTGATGCATGCTGTCGAAGGTGTCGGTCTCGGGAGCACCTGACGCAGCACATGTTGCAGCACACCAACTTGATGTCGTTCAGCTGTAATCTCTGCGATTACGATTGTCCCGACCGCGCGGAACTGAACGCGCACATGTTGAAACACACAGGCGATAGGCCGTTCAGTTCTGACGTCTGCGGTTGCAAATTCAAGCAGTCGGGTCATTTGAAAACGCACGCGTTgatacataccggcgagaagccgttcggttgtaaATTCTGCGATTACAGGTGCCGATCGGGGGGGAACTTGAAGAAGCACGTGCTGAGACACGGCCCGAGAGAAACTGTCGACTTGCGGATCCTTGCTAAATCCCGCAAGACTGCTTCAACCAAGGACTTGTCCCGCAAACAACTTCCTGAAAATAAATTGGACGAGCCCAAGAAGCAGTACAGCGCCAGCCTTCGGTACTCCTGCACTTTTTGCGATTACAAAACGAATTATTCGTGCCACTTAAAGTATCACATCTacacgcacaccggcgagaagccctACGTCTGTCTGGTTTGTGACCGGAGATTCAATCAGCCGTATAATTTGCGGCAGCACCTGCGCACCCACACCGGCGCGAGGCCGTTCCAGTGCGAGGTATGCGGCTCCAGTTTCCGCCAGGGTCACCACTTGAGAGATCACATGCTGAAGCACACCGACGAAAAACCCTACATCTGCGGGATTTGCCAGGCGAAGTTCAAGAGGGCCGAGTATTTGCAGCAGCACATGATCAGGCACACCGGGGAGAGGCCCTTCGAGTGTTCCGTTTGCTCGGCGAAGTTCGCGCGGAAGGTCACGATGCGAGAGCATCTGGCCGGTCACAGTGACGAGACGCCTTTTGAGTGCATGCTCTGCGAAAAGAAGTTTAAGACGAAGAGATCTTTGAAATGGCATGTGGCCTCGCATACCGAGACGAAACGTTATAAGTGTGACCAGTGCGAGTCTAGGTTTCGTTCCAGATATCAACTGCAGCGCCACTCGCTCGTCCACGGCGAAGtttatttCAGATACCAGTTGCATACTGAGTATCAAATTAAGCCAGAACTCTGCGATAGTAAATACGAACATGCCCGAAACTTGAAGCAACACGTGCTGACACACACCGGCGAGACACAGTTCGGCTTCAGCGATTCTCGCTGCCAGGAAAAGAATAAATTGAGTCAGCACTCATCGACGTATACCGACGAAAAACAATGCAATTTCAGCGATTCATCCTGCCAGGGAAAGAAACAATCAACCCAGCACTCACCGGCACACACCGATGAAAAACAATTCAGTTTCGGCGCATCCtcctttcaaaaaaagaaaaaatcggctCATCACTCGTCGACACTTTCCAACGAGAAGCCTTGTCACCTTTGCAGTTGCAGCTACCGCCAATCTGGAAATTTGAGGCGGCACGTGTTGACGCACACCAATAAGAAGCCCTTCGCCTGTAaactttgcgattacaagtgccgacGATCGGAATACCTAGACCGGCACATGTTAATACACACTGACGAGAAGCCCTTCAGCTGTACCTTCTGCGACTACAAGAGCCGACAACAAGAAAACTTGAATGTGCATCTgttaatacacaccgacgagaagccgttcggctgcactctttgcgattataaatgccgacagaaCGGAACGTTGAAGCGTCACATGCTGACGCACACAGGCGAGAATCCCTTCAGCTGCGGCATGTGCAATTACGAATGCCGACGGATCGAAATCCTGAAGCGACACATgctgatacacaccggcgagaaggtTTTCAGCTGCGACTATTGCGATTACGAGTGCCGCCGGCCCGAGACTTTGGAGGAGCATGCGTTGACACACGCCGACCAGAACGAATCCCCATCGATGCCGATTAGTTGTGGCCTTTGCAATTATAAGTGCCGACATGCCGCGAAGTTGAAACGTCACATGTTAACGCACAcggacgagaaaccgtttaagtgcggtctttgcgattacaaatgccgccGGTACGATATTCTGCAGCAGCACATGTTCTCGCACACCAGCGAGAAACCTTTTAGTTGCAGTCTTTGCGAGTACAAGGGCAAGCGGTACAGAAATTTGAAGAGGCACATGTTAATACATGGGAAGAAGCCGACGGCAAGCACGCGTGagcacacaccgacgagaaacgcTTAG
Protein Sequence
MPVKTIFNLIGSADNLRTRIEWEWVPKSISIGANTFKCHACASTFKSYIRMRRHMLTHTDETQFTCDFCDYKHRQRARLKSHMLTHTGEKPLSCRHCDFKCREAGSLRRHTFLHTGEKPFACDVCDYRCREVGRLKAHALTHTGEKPFACDLCDYTCRESGKLKQHMLRHVGDKSFSCDFCDYKCRQPGTLRRHTSTHTGEKTEKPFGCDLCDYRGREPGRLKRHMLIHTGEKPFSCTLCDYKCRQARTLKRHLLMHTGEEEEKPFRCDLCDYKCREPGKLKRHMLTHTGEKPFSCTLCDYKCRQSVRLKEHMMIHNGDEKPLSCHLCDYKCRQAGMLNRHKYSAISEPANPPKVYLPNYVYLSDLKPYTCPPIAVEPNERFFSCELCSYKSLFNKNLRAHKLAHSNDKPFPCDRCSYRFRTASKLRQHMRAHTDDKPFVCDECSLAFKHPQSLKKHKLKHTGEKSIACEQCDYKCRRPSEMKRHVMSRHTNRKHTDAKPLNCEFCDQKFKHDFTLKRHLLIHTGAKSFACELCDYKSRRPTDLKQHKVIMHNAEKKPFKCTFCDYECVLRAYLKRHMHTHTGEMQRCHLCNYQSTRPGSLKSHLLKHSEEKPFKCEHCTYASKTSRHLKVHIRVHHAKEKPQPSEISWVSCDSEYVLLNDLKLYTVEPIKIKSEKSFSCELCDYKTRFAGNLRAHRVKHTDEKPFLCDRCSSTFRTAANLRQHMRTHAADKPFSCEQCARTFKRPENLKAHLSKHNLESSRKARAGKVQYICERCGYKCATASLLKQHMRKHADGEPLTCELCAQKFKHLVTLKRHMLIHSAKQFSCELCDYKSRRITDMKQHKMIIHNDEKPFKCDVCDYACVLRSYLKRHMYTHTGQRHKCHLCSYESSRPGSLKSHLLRHSEERPFKCHELTRTEGKLLCYDRYQYRNPNPSKIKRHRITHADEKPFTCNICDYKFQQKSSLQEHMLWHTSEKRSVWNYSYSSRTETMNNPSRKLFTCDACCRRCRSREHLTQHMLQHTNLMSFSCNLCDYDCPDRAELNAHMLKHTGDRPFSSDVCGCKFKQSGHLKTHALIHTGEKPFGCKFCDYRCRSGGNLKKHVLRHGPRETVDLRILAKSRKTASTKDLSRKQLPENKLDEPKKQYSASLRYSCTFCDYKTNYSCHLKYHIYTHTGEKPYVCLVCDRRFNQPYNLRQHLRTHTGARPFQCEVCGSSFRQGHHLRDHMLKHTDEKPYICGICQAKFKRAEYLQQHMIRHTGERPFECSVCSAKFARKVTMREHLAGHSDETPFECMLCEKKFKTKRSLKWHVASHTETKRYKCDQCESRFRSRYQLQRHSLVHGEVYFRYQLHTEYQIKPELCDSKYEHARNLKQHVLTHTGETQFGFSDSRCQEKNKLSQHSSTYTDEKQCNFSDSSCQGKKQSTQHSPAHTDEKQFSFGASSFQKKKKSAHHSSTLSNEKPCHLCSCSYRQSGNLRRHVLTHTNKKPFACKLCDYKCRRSEYLDRHMLIHTDEKPFSCTFCDYKSRQQENLNVHLLIHTDEKPFGCTLCDYKCRQNGTLKRHMLTHTGENPFSCGMCNYECRRIEILKRHMLIHTGEKVFSCDYCDYECRRPETLEEHALTHADQNESPSMPISCGLCNYKCRHAAKLKRHMLTHTDEKPFKCGLCDYKCRRYDILQQHMFSHTSEKPFSCSLCEYKGKRYRNLKRHMLIHGKKPTASTREHTPTRNA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01258880;
90% Identity
iTF_01258880;
80% Identity
iTF_01258880;