Basic Information

Insect: Prosopocoilus inquinatus
Gene Symbol: -
Assembly: GCA_036172665.1
Location: CM069876.1:45084482-45097638[-]

Transcription Factor Domain

TF Family: zf-GAGA
Domain: zf-GAGA domain
PFAM: PF09237
TF Group: Zinc-Coordinating Group
Description: Members of this family bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 32 0.0049 2.9 9.1 0.2 25 44 43 62 35 66 0.86

2 32 8 4.8e+03 -1.3 0.1 18 44 102 128 95 133 0.78

3 32 0.11 67 4.7 0.0 21 47 133 159 130 165 0.86

4 32 0.45 2.6e+02 2.8 0.2 21 48 161 187 158 190 0.89

5 32 5.1 3e+03 -0.6 0.0 25 47 220 242 214 248 0.75

6 32 1.9 1.1e+03 0.7 0.0 17 43 240 266 233 271 0.78

7 32 0.003 1.8 9.7 0.1 21 47 272 298 253 305 0.83

8 32 0.71 4.2e+02 2.1 0.6 12 46 326 360 315 367 0.73

9 32 8.1 4.8e+03 -1.3 0.1 21 48 363 389 360 395 0.84

10 32 0.0013 0.8 10.8 0.0 21 47 419 446 415 453 0.83

11 32 7 4.2e+03 -1.1 0.0 21 44 448 471 445 478 0.84

12 32 0.28 1.6e+02 3.4 0.1 12 45 522 555 513 562 0.76

13 32 3.4 2e+03 -0.1 0.2 21 44 593 616 585 623 0.84

14 32 0.18 1.1e+02 4.0 0.1 22 47 635 660 630 665 0.82

15 32 0.3 1.8e+02 3.3 0.0 21 44 662 685 659 689 0.90

16 32 0.00042 0.25 12.5 0.1 21 46 690 714 688 719 0.90

17 32 1.7 1e+03 0.9 0.1 18 44 741 767 732 771 0.85

18 32 0.00018 0.1 13.7 0.3 21 44 772 795 769 803 0.87

19 32 0.26 1.5e+02 3.5 0.0 21 48 800 826 797 828 0.91

20 32 0.07 42 5.3 0.2 17 48 824 854 817 860 0.86

21 32 0.72 4.3e+02 2.1 0.0 21 35 884 898 876 912 0.76

22 32 6.2 3.7e+03 -0.9 0.0 21 47 909 935 904 942 0.83

23 32 8.1 4.8e+03 -1.3 0.0 21 47 962 988 952 993 0.77

24 32 0.053 31 5.7 0.1 21 48 990 1016 987 1020 0.90

25 32 0.14 81 4.4 0.3 21 44 1046 1069 1038 1073 0.90

26 32 0.22 1.3e+02 3.7 0.1 21 46 1074 1099 1072 1106 0.85

27 32 2.5 1.5e+03 0.3 0.0 21 46 1102 1127 1099 1133 0.84

28 32 0.38 2.3e+02 3.0 0.1 22 49 1131 1157 1128 1161 0.88

29 32 0.68 4e+02 2.2 0.2 18 48 1155 1184 1154 1188 0.90

30 32 1.6 9.5e+02 1.0 0.0 21 52 1214 1242 1209 1244 0.72

31 32 1.7 1e+03 0.9 0.0 23 44 1241 1262 1235 1271 0.85

32 32 3 1.8e+03 0.1 0.3 22 45 1268 1291 1263 1295 0.87

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	32	0.0049	2.9	9.1	0.2	25	44	43	62	35	66	0.86
2	32	8	4.8e+03	-1.3	0.1	18	44	102	128	95	133	0.78
3	32	0.11	67	4.7	0.0	21	47	133	159	130	165	0.86
4	32	0.45	2.6e+02	2.8	0.2	21	48	161	187	158	190	0.89
5	32	5.1	3e+03	-0.6	0.0	25	47	220	242	214	248	0.75
6	32	1.9	1.1e+03	0.7	0.0	17	43	240	266	233	271	0.78
7	32	0.003	1.8	9.7	0.1	21	47	272	298	253	305	0.83
8	32	0.71	4.2e+02	2.1	0.6	12	46	326	360	315	367	0.73
9	32	8.1	4.8e+03	-1.3	0.1	21	48	363	389	360	395	0.84
10	32	0.0013	0.8	10.8	0.0	21	47	419	446	415	453	0.83
11	32	7	4.2e+03	-1.1	0.0	21	44	448	471	445	478	0.84
12	32	0.28	1.6e+02	3.4	0.1	12	45	522	555	513	562	0.76
13	32	3.4	2e+03	-0.1	0.2	21	44	593	616	585	623	0.84
14	32	0.18	1.1e+02	4.0	0.1	22	47	635	660	630	665	0.82
15	32	0.3	1.8e+02	3.3	0.0	21	44	662	685	659	689	0.90
16	32	0.00042	0.25	12.5	0.1	21	46	690	714	688	719	0.90
17	32	1.7	1e+03	0.9	0.1	18	44	741	767	732	771	0.85
18	32	0.00018	0.1	13.7	0.3	21	44	772	795	769	803	0.87
19	32	0.26	1.5e+02	3.5	0.0	21	48	800	826	797	828	0.91
20	32	0.07	42	5.3	0.2	17	48	824	854	817	860	0.86
21	32	0.72	4.3e+02	2.1	0.0	21	35	884	898	876	912	0.76
22	32	6.2	3.7e+03	-0.9	0.0	21	47	909	935	904	942	0.83
23	32	8.1	4.8e+03	-1.3	0.0	21	47	962	988	952	993	0.77
24	32	0.053	31	5.7	0.1	21	48	990	1016	987	1020	0.90
25	32	0.14	81	4.4	0.3	21	44	1046	1069	1038	1073	0.90
26	32	0.22	1.3e+02	3.7	0.1	21	46	1074	1099	1072	1106	0.85
27	32	2.5	1.5e+03	0.3	0.0	21	46	1102	1127	1099	1133	0.84
28	32	0.38	2.3e+02	3.0	0.1	22	49	1131	1157	1128	1161	0.88
29	32	0.68	4e+02	2.2	0.2	18	48	1155	1184	1154	1188	0.90
30	32	1.6	9.5e+02	1.0	0.0	21	52	1214	1242	1209	1244	0.72
31	32	1.7	1e+03	0.9	0.0	23	44	1241	1262	1235	1271	0.85
32	32	3	1.8e+03	0.1	0.3	22	45	1268	1291	1263	1295	0.87

Sequence Information

Coding Sequence: ATGAGGCTGCACAAGTTAAGGCATACCAAGGTCAAACGCTTCAGATGTACCGTTTGCGAATACAAATGTCTCGAATTGGCGCAATTAAAGCGGCACATGTTGACACACAACGGCGAACGCCCGTTGTTCACCTGTCGAATTTGCGATAAGAATTTCAAACAGCTCCGAAACTTGACGCGTCACATgtGTCGCGACAACCAAATGTTGAGACAACACGTATCGACGCACACCGGAAACTCCTTGACTTGTGACgtctgcgattacaagtgcggACGTTCCGACATTATGAAGACGCACAAGCTGAGGCATGCCAACGAGAAGCGCTTCACTTGTGCTCTTTGCGAATACAAATCCGTCGATGCACCGCACTTAAAACGGCACATGTTGACGCACAACAATGAAAAGCCGTTCACCTGTGCAACTTGCGATAAGAAATTCCGAGCGTTGGTAAGCTTGAAACGTCACATgttgatacacaccggcgaaaagccgttcggttgcgatctttgcgattacaggtGTCGCGACAATCAAATGTTGAGACAACACACGCTGAGACACACCGGAGAGTCGCTGAGatgcgacctttgcgattacgAAACCACACGCTCTCACTATCTGAATCTGCACAAGTTAAAACATGCCGACGAGAAGCGATTCGGCTGTACGCTTTGCGAATACAAATGCCTCAAATCGTCGCAGTTAAAACGGCACATGTCAACACACaacgacgagaagccgttcgcctGCGAAATCTGCGCTAAGAAATTCAAAAGCCTGGAAGGTTTGAGAGGCCACAAGTTGATACACGACGACGAAAAGTCGTTCGCCTGTGGAATCTGTCGCAATGCGTTCAGACAAGTCGGAAGCTTGAGGCGTCACGTGTTgatgcacaccggcgagaaaccgttcggctgCGATCTCTGTGATTACAAGTGTCGAGAGAAGACAAGGCGCAGGCGGACTCGTAAACCCAAACCCAAACCTAAACCTAAACCTGAGGAGAAGGGAAAAGCGATGTGCCGCATATGTGACGCCGAATTTACAACTAAAGCGTATCTGAAGAAACACGTgctgatacacaccggcgaaaaaccGCTCAATTGTgaactttgcgattacaaatgtcgcCTCCCCTCCAGCATGAGGCTGCACAAGTTAAGGCATACCAAGGCCAAGCGCTTCAGATGTACCGTTTGCGAATACCAATGTCTCGAATCAGCGCAATTAAAGCGGCACGTCTTGACACACAACGGCGAACAGCCGTTGTTCACCTGTGGAATTTGCGATAAGAATTTCACGCAGCTCGGAAACTTGAGGCGTCACATGTTAGTgcacaccggcgaaaagccgTTCGCTTGCGATCTATGCGACTACAGGTGCCGAAGCAACTCGATGTTGAAACACCACGTATCGACGCACACCGGAAAGTCCTTGACTTGTGACgtctgcgattacaagtgcggACGTTCCGACACCATGAAGACGCACAAGCTGAGGCACGCCAACGAGAAGCGGTTCGGTTGTACTCTTTGCGAATACAAATCCGTCCACGCACCGCACTTAAAACGGCACATGCAGACGCACAACAACGACAAGCCGTACACCTGTGCGATTTGCGATAAGAAATTCCGAGCGTTGGTGAGCTTGAAAGGCCACATgtgCAAACGGACTCTTGAATCTAAACTCGAAGAGAAAGAACAAATCACATGCCGCATATGTGATTCTACATTCACAACTAAAGCATGTTTGAAAGAACACGTGCTGTCACACACCGGCGAACAACTGCTTAactgtgatctctgcgattacaaatgcctcAGAGAGTCACAATTAAAACGACACGTGTTAACGCATAACGACGAAAAATCCTTGGCACGCCACATGTTAACACACTCCGGCGAAAAGTCATTCgtttgcgatctttgcgattacaagtgtcgAGAGAAACGAACGTTGAAACGCCACATGCTAATgcacaccggcgaaaagccgTTTGGCTGCGATCTCTGTGATTTCAAGTGTCGAGGCAAGTCGAATTTGACACGGCAcatgttaatacacaccggagagaagccgttcagttgcgatctcTGTCATTACAAGTTCCGAAGCAGCTCGAACTTGAAGCGGCACTTGTTAAAACACGAAAAGTCGCTGTGTTGTGacgtttgcgattacaagtgcgaGCGTTCCAACGCCATGAAGGCGCACAAGTTAAGACACGCCAACGAGAAGCGGTTCAGCTGTACACTTTGCGAGTACAAATGTCTCGAATCGAAGGCGTTAAAACGCCACATGTTGATCCACAACAACGAAAAGCCGTTTACCTGTGAGATTTGCGATCAGAAATTCAGACAAATCCAACACTTGAGACGTCACaagttaatacacaccggcgagaagccgtacaGCTGCGATATTTGCGATTTCAAGTGCCGAGAGACGGGAACGCTGAACAAACACATGTTgaggcacaccggcgagaagccgttcagttgtgatctttgcgatttcaAATGCCGACACCAGGAAAATTTGAAACTGCACAAATTAAGGCATGCCAACGAAAAGCGCTTCCGTTGTACCATTTGCGAATACAAGTGCCTCAGAGCAGCGGAATTAAAACAGCATGTGTTAAAgcacaccggcgaaaaaccGTTCACGTGCGGTATTTGCGATAAGAAAGTCAAACACTTGCGGCCCCACATGTTAACCCACAaggacgagaaaccgttcggttgcaaactctgcgattacaagtgtcgAAGCAACCCGGTTTTGAAGCAGCACATGTTGATACActccggcgagaagccgttcagttgcgatctttgcgattacaagggCCGAAATACCTCAAAgtgCGAACCGACTCTTAAATCTAAAGGAAAAGTCGCATGCGACATATGCGATTCTCAGTTTACAACTAAAGCGTATTTGAAGAAACACCTGCTGATAcataccgacgagaaaccgctgagctgcgatctttgcgattacaaatgccgagcGTCCTCCAACCTGAAGATACACAAATTAAGGCACGCCGACGAGAAGCGGTTCCGCTGTACTCTCTGCGAATACAAATGTCTCCATTCGTCGCACTTGAAACGGCACATGTTGACACACAACGACGAACACCCGTTCGCCTGTGAAATTTGCGGTAAAAAATTCCGACAACTCCCACGCCTGAGATGTCACATgttgatacacaccggcgaaaggccgttcagctgcgatctttgcgatttctCGTGCCGAGAGGCCCCGGCGTTGAAACGCCACATGTTAGTgcacaccggcgaaaagccgttcagttgcgatctttgcgactACAAGTGTCGAGCCGCCTCGGGTTTGAAGCATCAcatgttaatacacaccggcgagaagccattCGGTTGCGATCAGTGCGATTTCAGATGCCGACAAAACGCAAAGctgaaacaacacatgctaagacacaccggcgagaaaccgttcagttgtgatctttgcgatttcaAATGCCGACACCTTCAAACTTTGAAGCTGCACGAATTaaggcacaccgacgagaagcgaTTCCGCTGTACTATTTGCGAATATAAGTGCTTCAGAGCATCACAGTTAAAACAGCACGTGTTGAACCACAGCAGCGAAAGTTCGTTCACGTGCGGGATTTGCGATAAGAAAGTCAAACACTTGAGAGCTCACATGTTAACACACACCGGCGCAAAGCCGTTaggttgcgatctttgcgattacaaatgtcgaGACAACTCAGCGTTGAAACGGCACatgttaacgcacaccgacgacaagccattcagttgcgatctttgcgattacagatGTCGACACTATCAAAGTTTGAGAATGCACATGTCGAGGCACACCGAAGAATCAACGACGCACTCTACCGACCACGCGCAAGCAACTAATTCGTAa
Protein Sequence: MRLHKLRHTKVKRFRCTVCEYKCLELAQLKRHMLTHNGERPLFTCRICDKNFKQLRNLTRHMCRDNQMLRQHVSTHTGNSLTCDVCDYKCGRSDIMKTHKLRHANEKRFTCALCEYKSVDAPHLKRHMLTHNNEKPFTCATCDKKFRALVSLKRHMLIHTGEKPFGCDLCDYRCRDNQMLRQHTLRHTGESLRCDLCDYETTRSHYLNLHKLKHADEKRFGCTLCEYKCLKSSQLKRHMSTHNDEKPFACEICAKKFKSLEGLRGHKLIHDDEKSFACGICRNAFRQVGSLRRHVLMHTGEKPFGCDLCDYKCREKTRRRRTRKPKPKPKPKPEEKGKAMCRICDAEFTTKAYLKKHVLIHTGEKPLNCELCDYKCRLPSSMRLHKLRHTKAKRFRCTVCEYQCLESAQLKRHVLTHNGEQPLFTCGICDKNFTQLGNLRRHMLVHTGEKPFACDLCDYRCRSNSMLKHHVSTHTGKSLTCDVCDYKCGRSDTMKTHKLRHANEKRFGCTLCEYKSVHAPHLKRHMQTHNNDKPYTCAICDKKFRALVSLKGHMCKRTLESKLEEKEQITCRICDSTFTTKACLKEHVLSHTGEQLLNCDLCDYKCLRESQLKRHVLTHNDEKSLARHMLTHSGEKSFVCDLCDYKCREKRTLKRHMLMHTGEKPFGCDLCDFKCRGKSNLTRHMLIHTGEKPFSCDLCHYKFRSSSNLKRHLLKHEKSLCCDVCDYKCERSNAMKAHKLRHANEKRFSCTLCEYKCLESKALKRHMLIHNNEKPFTCEICDQKFRQIQHLRRHKLIHTGEKPYSCDICDFKCRETGTLNKHMLRHTGEKPFSCDLCDFKCRHQENLKLHKLRHANEKRFRCTICEYKCLRAAELKQHVLKHTGEKPFTCGICDKKVKHLRPHMLTHKDEKPFGCKLCDYKCRSNPVLKQHMLIHSGEKPFSCDLCDYKGRNTSKCEPTLKSKGKVACDICDSQFTTKAYLKKHLLIHTDEKPLSCDLCDYKCRASSNLKIHKLRHADEKRFRCTLCEYKCLHSSHLKRHMLTHNDEHPFACEICGKKFRQLPRLRCHMLIHTGERPFSCDLCDFSCREAPALKRHMLVHTGEKPFSCDLCDYKCRAASGLKHHMLIHTGEKPFGCDQCDFRCRQNAKLKQHMLRHTGEKPFSCDLCDFKCRHLQTLKLHELRHTDEKRFRCTICEYKCFRASQLKQHVLNHSSESSFTCGICDKKVKHLRAHMLTHTGAKPLGCDLCDYKCRDNSALKRHMLTHTDDKPFSCDLCDYRCRHYQSLRMHMSRHTEESTTHSTDHAQATNS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01258278;
90% Identity: iTF_01258278;
80% Identity: iTF_01258278;