Pinq024104.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Prosopocoilus inquinatus
Gene Symbol
-
Assembly
GCA_036172665.1
Location
CM069876.1:45084482-45097638[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 44 0.058 3.6 9.2 2.4 1 23 14 36 14 36 0.98
2 44 1.4e-05 0.00089 20.5 2.6 1 21 43 63 43 64 0.95
3 44 4.1 2.6e+02 3.3 2.1 2 23 82 103 81 103 0.94
4 44 0.00092 0.057 14.8 0.8 1 23 109 131 109 131 0.98
5 44 5.4e-05 0.0034 18.7 0.7 1 23 137 159 137 159 0.98
6 44 0.033 2.1 9.9 2.8 3 23 167 187 165 187 0.97
7 44 0.025 1.6 10.3 2.6 2 23 193 214 192 214 0.96
8 44 0.16 10 7.8 3.8 3 23 222 242 220 242 0.96
9 44 0.0052 0.32 12.5 0.2 1 23 248 270 248 270 0.96
10 44 0.0032 0.2 13.1 0.1 1 23 276 298 276 298 0.97
11 44 0.00035 0.022 16.1 0.3 3 23 341 361 340 361 0.96
12 44 0.34 22 6.7 2.4 2 23 368 389 367 389 0.95
13 44 0.24 15 7.2 1.9 1 23 395 417 395 417 0.98
14 44 2e-07 1.2e-05 26.4 0.4 1 23 424 446 424 446 0.98
15 44 0.0026 0.16 13.4 4.6 1 23 452 474 452 474 0.97
16 44 0.085 5.3 8.6 2.9 2 23 480 501 479 501 0.96
17 44 0.0092 0.58 11.7 3.0 3 23 509 529 507 529 0.98
18 44 0.0031 0.19 13.2 0.8 1 21 535 555 535 556 0.95
19 44 0.0024 0.15 13.5 1.7 2 23 570 591 569 591 0.96
20 44 0.047 2.9 9.5 2.2 2 23 598 619 597 619 0.95
21 44 8 5e+02 2.4 0.2 13 23 622 632 620 632 0.87
22 44 0.00064 0.04 15.3 3.7 1 23 638 660 638 660 0.98
23 44 0.00083 0.052 15.0 2.3 3 23 668 688 666 688 0.97
24 44 1.7e-05 0.0011 20.3 5.1 1 23 694 716 694 716 0.98
25 44 0.37 23 6.6 3.9 2 23 721 742 720 742 0.95
26 44 0.27 17 7.1 2.3 1 23 748 770 748 770 0.97
27 44 0.00013 0.0078 17.6 3.0 1 23 776 798 776 798 0.98
28 44 0.0025 0.16 13.5 2.7 1 23 804 826 804 826 0.98
29 44 0.028 1.7 10.2 6.4 1 23 832 854 832 854 0.97
30 44 0.074 4.6 8.8 1.8 1 23 860 882 860 882 0.97
31 44 2.7 1.7e+02 3.9 1.5 1 23 888 907 888 907 0.74
32 44 0.023 1.5 10.4 1.7 3 23 915 935 913 935 0.98
33 44 0.00027 0.017 16.5 0.3 3 23 968 988 967 988 0.97
34 44 0.012 0.78 11.3 2.4 2 23 995 1016 994 1016 0.96
35 44 0.082 5.1 8.7 9.1 1 23 1022 1044 1022 1044 0.98
36 44 0.0027 0.17 13.4 1.3 1 23 1050 1072 1050 1072 0.96
37 44 0.00079 0.049 15.0 0.6 1 23 1078 1100 1078 1100 0.98
38 44 0.0027 0.17 13.4 2.4 1 23 1106 1128 1106 1128 0.98
39 44 0.0075 0.47 12.0 3.4 3 23 1136 1156 1134 1156 0.98
40 44 0.63 39 5.9 5.6 1 23 1162 1184 1162 1184 0.97
41 44 0.0036 0.23 13.0 3.5 1 23 1190 1212 1190 1212 0.96
42 44 0.11 7.2 8.2 2.2 1 23 1218 1237 1218 1237 0.96
43 44 0.00017 0.01 17.2 2.8 3 23 1245 1265 1245 1265 0.99
44 44 0.028 1.8 10.2 6.7 1 23 1271 1293 1271 1293 0.98

Sequence Information

Coding Sequence
ATGAGGCTGCACAAGTTAAGGCATACCAAGGTCAAACGCTTCAGATGTACCGTTTGCGAATACAAATGTCTCGAATTGGCGCAATTAAAGCGGCACATGTTGACACACAACGGCGAACGCCCGTTGTTCACCTGTCGAATTTGCGATAAGAATTTCAAACAGCTCCGAAACTTGACGCGTCACATgtGTCGCGACAACCAAATGTTGAGACAACACGTATCGACGCACACCGGAAACTCCTTGACTTGTGACgtctgcgattacaagtgcggACGTTCCGACATTATGAAGACGCACAAGCTGAGGCATGCCAACGAGAAGCGCTTCACTTGTGCTCTTTGCGAATACAAATCCGTCGATGCACCGCACTTAAAACGGCACATGTTGACGCACAACAATGAAAAGCCGTTCACCTGTGCAACTTGCGATAAGAAATTCCGAGCGTTGGTAAGCTTGAAACGTCACATgttgatacacaccggcgaaaagccgttcggttgcgatctttgcgattacaggtGTCGCGACAATCAAATGTTGAGACAACACACGCTGAGACACACCGGAGAGTCGCTGAGatgcgacctttgcgattacgAAACCACACGCTCTCACTATCTGAATCTGCACAAGTTAAAACATGCCGACGAGAAGCGATTCGGCTGTACGCTTTGCGAATACAAATGCCTCAAATCGTCGCAGTTAAAACGGCACATGTCAACACACaacgacgagaagccgttcgcctGCGAAATCTGCGCTAAGAAATTCAAAAGCCTGGAAGGTTTGAGAGGCCACAAGTTGATACACGACGACGAAAAGTCGTTCGCCTGTGGAATCTGTCGCAATGCGTTCAGACAAGTCGGAAGCTTGAGGCGTCACGTGTTgatgcacaccggcgagaaaccgttcggctgCGATCTCTGTGATTACAAGTGTCGAGAGAAGACAAGGCGCAGGCGGACTCGTAAACCCAAACCCAAACCTAAACCTAAACCTGAGGAGAAGGGAAAAGCGATGTGCCGCATATGTGACGCCGAATTTACAACTAAAGCGTATCTGAAGAAACACGTgctgatacacaccggcgaaaaaccGCTCAATTGTgaactttgcgattacaaatgtcgcCTCCCCTCCAGCATGAGGCTGCACAAGTTAAGGCATACCAAGGCCAAGCGCTTCAGATGTACCGTTTGCGAATACCAATGTCTCGAATCAGCGCAATTAAAGCGGCACGTCTTGACACACAACGGCGAACAGCCGTTGTTCACCTGTGGAATTTGCGATAAGAATTTCACGCAGCTCGGAAACTTGAGGCGTCACATGTTAGTgcacaccggcgaaaagccgTTCGCTTGCGATCTATGCGACTACAGGTGCCGAAGCAACTCGATGTTGAAACACCACGTATCGACGCACACCGGAAAGTCCTTGACTTGTGACgtctgcgattacaagtgcggACGTTCCGACACCATGAAGACGCACAAGCTGAGGCACGCCAACGAGAAGCGGTTCGGTTGTACTCTTTGCGAATACAAATCCGTCCACGCACCGCACTTAAAACGGCACATGCAGACGCACAACAACGACAAGCCGTACACCTGTGCGATTTGCGATAAGAAATTCCGAGCGTTGGTGAGCTTGAAAGGCCACATgtgCAAACGGACTCTTGAATCTAAACTCGAAGAGAAAGAACAAATCACATGCCGCATATGTGATTCTACATTCACAACTAAAGCATGTTTGAAAGAACACGTGCTGTCACACACCGGCGAACAACTGCTTAactgtgatctctgcgattacaaatgcctcAGAGAGTCACAATTAAAACGACACGTGTTAACGCATAACGACGAAAAATCCTTGGCACGCCACATGTTAACACACTCCGGCGAAAAGTCATTCgtttgcgatctttgcgattacaagtgtcgAGAGAAACGAACGTTGAAACGCCACATGCTAATgcacaccggcgaaaagccgTTTGGCTGCGATCTCTGTGATTTCAAGTGTCGAGGCAAGTCGAATTTGACACGGCAcatgttaatacacaccggagagaagccgttcagttgcgatctcTGTCATTACAAGTTCCGAAGCAGCTCGAACTTGAAGCGGCACTTGTTAAAACACGAAAAGTCGCTGTGTTGTGacgtttgcgattacaagtgcgaGCGTTCCAACGCCATGAAGGCGCACAAGTTAAGACACGCCAACGAGAAGCGGTTCAGCTGTACACTTTGCGAGTACAAATGTCTCGAATCGAAGGCGTTAAAACGCCACATGTTGATCCACAACAACGAAAAGCCGTTTACCTGTGAGATTTGCGATCAGAAATTCAGACAAATCCAACACTTGAGACGTCACaagttaatacacaccggcgagaagccgtacaGCTGCGATATTTGCGATTTCAAGTGCCGAGAGACGGGAACGCTGAACAAACACATGTTgaggcacaccggcgagaagccgttcagttgtgatctttgcgatttcaAATGCCGACACCAGGAAAATTTGAAACTGCACAAATTAAGGCATGCCAACGAAAAGCGCTTCCGTTGTACCATTTGCGAATACAAGTGCCTCAGAGCAGCGGAATTAAAACAGCATGTGTTAAAgcacaccggcgaaaaaccGTTCACGTGCGGTATTTGCGATAAGAAAGTCAAACACTTGCGGCCCCACATGTTAACCCACAaggacgagaaaccgttcggttgcaaactctgcgattacaagtgtcgAAGCAACCCGGTTTTGAAGCAGCACATGTTGATACActccggcgagaagccgttcagttgcgatctttgcgattacaagggCCGAAATACCTCAAAgtgCGAACCGACTCTTAAATCTAAAGGAAAAGTCGCATGCGACATATGCGATTCTCAGTTTACAACTAAAGCGTATTTGAAGAAACACCTGCTGATAcataccgacgagaaaccgctgagctgcgatctttgcgattacaaatgccgagcGTCCTCCAACCTGAAGATACACAAATTAAGGCACGCCGACGAGAAGCGGTTCCGCTGTACTCTCTGCGAATACAAATGTCTCCATTCGTCGCACTTGAAACGGCACATGTTGACACACAACGACGAACACCCGTTCGCCTGTGAAATTTGCGGTAAAAAATTCCGACAACTCCCACGCCTGAGATGTCACATgttgatacacaccggcgaaaggccgttcagctgcgatctttgcgatttctCGTGCCGAGAGGCCCCGGCGTTGAAACGCCACATGTTAGTgcacaccggcgaaaagccgttcagttgcgatctttgcgactACAAGTGTCGAGCCGCCTCGGGTTTGAAGCATCAcatgttaatacacaccggcgagaagccattCGGTTGCGATCAGTGCGATTTCAGATGCCGACAAAACGCAAAGctgaaacaacacatgctaagacacaccggcgagaaaccgttcagttgtgatctttgcgatttcaAATGCCGACACCTTCAAACTTTGAAGCTGCACGAATTaaggcacaccgacgagaagcgaTTCCGCTGTACTATTTGCGAATATAAGTGCTTCAGAGCATCACAGTTAAAACAGCACGTGTTGAACCACAGCAGCGAAAGTTCGTTCACGTGCGGGATTTGCGATAAGAAAGTCAAACACTTGAGAGCTCACATGTTAACACACACCGGCGCAAAGCCGTTaggttgcgatctttgcgattacaaatgtcgaGACAACTCAGCGTTGAAACGGCACatgttaacgcacaccgacgacaagccattcagttgcgatctttgcgattacagatGTCGACACTATCAAAGTTTGAGAATGCACATGTCGAGGCACACCGAAGAATCAACGACGCACTCTACCGACCACGCGCAAGCAACTAATTCGTAa
Protein Sequence
MRLHKLRHTKVKRFRCTVCEYKCLELAQLKRHMLTHNGERPLFTCRICDKNFKQLRNLTRHMCRDNQMLRQHVSTHTGNSLTCDVCDYKCGRSDIMKTHKLRHANEKRFTCALCEYKSVDAPHLKRHMLTHNNEKPFTCATCDKKFRALVSLKRHMLIHTGEKPFGCDLCDYRCRDNQMLRQHTLRHTGESLRCDLCDYETTRSHYLNLHKLKHADEKRFGCTLCEYKCLKSSQLKRHMSTHNDEKPFACEICAKKFKSLEGLRGHKLIHDDEKSFACGICRNAFRQVGSLRRHVLMHTGEKPFGCDLCDYKCREKTRRRRTRKPKPKPKPKPEEKGKAMCRICDAEFTTKAYLKKHVLIHTGEKPLNCELCDYKCRLPSSMRLHKLRHTKAKRFRCTVCEYQCLESAQLKRHVLTHNGEQPLFTCGICDKNFTQLGNLRRHMLVHTGEKPFACDLCDYRCRSNSMLKHHVSTHTGKSLTCDVCDYKCGRSDTMKTHKLRHANEKRFGCTLCEYKSVHAPHLKRHMQTHNNDKPYTCAICDKKFRALVSLKGHMCKRTLESKLEEKEQITCRICDSTFTTKACLKEHVLSHTGEQLLNCDLCDYKCLRESQLKRHVLTHNDEKSLARHMLTHSGEKSFVCDLCDYKCREKRTLKRHMLMHTGEKPFGCDLCDFKCRGKSNLTRHMLIHTGEKPFSCDLCHYKFRSSSNLKRHLLKHEKSLCCDVCDYKCERSNAMKAHKLRHANEKRFSCTLCEYKCLESKALKRHMLIHNNEKPFTCEICDQKFRQIQHLRRHKLIHTGEKPYSCDICDFKCRETGTLNKHMLRHTGEKPFSCDLCDFKCRHQENLKLHKLRHANEKRFRCTICEYKCLRAAELKQHVLKHTGEKPFTCGICDKKVKHLRPHMLTHKDEKPFGCKLCDYKCRSNPVLKQHMLIHSGEKPFSCDLCDYKGRNTSKCEPTLKSKGKVACDICDSQFTTKAYLKKHLLIHTDEKPLSCDLCDYKCRASSNLKIHKLRHADEKRFRCTLCEYKCLHSSHLKRHMLTHNDEHPFACEICGKKFRQLPRLRCHMLIHTGERPFSCDLCDFSCREAPALKRHMLVHTGEKPFSCDLCDYKCRAASGLKHHMLIHTGEKPFGCDQCDFRCRQNAKLKQHMLRHTGEKPFSCDLCDFKCRHLQTLKLHELRHTDEKRFRCTICEYKCFRASQLKQHVLNHSSESSFTCGICDKKVKHLRAHMLTHTGAKPLGCDLCDYKCRDNSALKRHMLTHTDDKPFSCDLCDYRCRHYQSLRMHMSRHTEESTTHSTDHAQATNS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01258878;
90% Identity
iTF_01258878;
80% Identity
iTF_01258878;