Basic Information

Insect: Prosopocoilus inquinatus
Gene Symbol: -
Assembly: GCA_036172665.1
Location: CM069876.1:49500146-49506245[+]

Transcription Factor Domain

TF Family: zf-GAGA
Domain: zf-GAGA domain
PFAM: PF09237
TF Group: Zinc-Coordinating Group
Description: Members of this family bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 23 0.0081 4.8 8.3 0.1 22 44 7 29 3 39 0.86

2 23 3.7 2.2e+03 -0.2 0.0 23 48 64 88 54 94 0.83

3 23 3.9 2.3e+03 -0.2 0.0 21 43 140 162 132 168 0.87

4 23 0.066 39 5.4 0.0 21 46 168 192 163 196 0.87

5 23 0.036 21 6.3 0.1 20 48 195 222 191 227 0.87

6 23 7 4.1e+03 -1.1 0.0 21 44 224 247 221 251 0.83

7 23 1.3 7.9e+02 1.2 0.4 21 48 280 306 272 313 0.82

8 23 0.06 35 5.6 0.8 26 47 347 368 323 373 0.85

9 23 0.14 83 4.4 0.0 21 48 370 396 367 399 0.88

10 23 0.099 59 4.9 0.7 22 48 399 424 395 429 0.85

11 23 0.75 4.4e+02 2.0 0.1 21 48 426 452 422 458 0.85

12 23 0.12 69 4.6 0.6 23 48 484 508 479 514 0.86

13 23 0.0011 0.66 11.1 0.4 19 47 536 563 521 566 0.84

14 23 0.27 1.6e+02 3.5 0.1 21 48 566 592 561 597 0.86

15 23 7.6 4.5e+03 -1.2 0.0 22 44 595 617 589 621 0.85

16 23 0.23 1.4e+02 3.7 0.0 22 48 623 648 619 653 0.87

17 23 0.57 3.4e+02 2.4 0.5 17 48 662 692 656 694 0.83

18 23 0.13 75 4.5 0.6 18 48 691 720 690 726 0.82

19 23 0.045 27 5.9 0.0 21 44 778 801 772 806 0.92

20 23 0.029 17 6.6 0.3 21 51 806 835 802 838 0.87

21 23 1.1 6.3e+02 1.5 0.1 23 48 836 860 833 862 0.90

22 23 7.2e-05 0.043 14.9 0.6 8 48 849 888 844 894 0.83

23 23 2.7 1.6e+03 0.3 0.3 17 43 886 912 885 917 0.81

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	23	0.0081	4.8	8.3	0.1	22	44	7	29	3	39	0.86
2	23	3.7	2.2e+03	-0.2	0.0	23	48	64	88	54	94	0.83
3	23	3.9	2.3e+03	-0.2	0.0	21	43	140	162	132	168	0.87
4	23	0.066	39	5.4	0.0	21	46	168	192	163	196	0.87
5	23	0.036	21	6.3	0.1	20	48	195	222	191	227	0.87
6	23	7	4.1e+03	-1.1	0.0	21	44	224	247	221	251	0.83
7	23	1.3	7.9e+02	1.2	0.4	21	48	280	306	272	313	0.82
8	23	0.06	35	5.6	0.8	26	47	347	368	323	373	0.85
9	23	0.14	83	4.4	0.0	21	48	370	396	367	399	0.88
10	23	0.099	59	4.9	0.7	22	48	399	424	395	429	0.85
11	23	0.75	4.4e+02	2.0	0.1	21	48	426	452	422	458	0.85
12	23	0.12	69	4.6	0.6	23	48	484	508	479	514	0.86
13	23	0.0011	0.66	11.1	0.4	19	47	536	563	521	566	0.84
14	23	0.27	1.6e+02	3.5	0.1	21	48	566	592	561	597	0.86
15	23	7.6	4.5e+03	-1.2	0.0	22	44	595	617	589	621	0.85
16	23	0.23	1.4e+02	3.7	0.0	22	48	623	648	619	653	0.87
17	23	0.57	3.4e+02	2.4	0.5	17	48	662	692	656	694	0.83
18	23	0.13	75	4.5	0.6	18	48	691	720	690	726	0.82
19	23	0.045	27	5.9	0.0	21	44	778	801	772	806	0.92
20	23	0.029	17	6.6	0.3	21	51	806	835	802	838	0.87
21	23	1.1	6.3e+02	1.5	0.1	23	48	836	860	833	862	0.90
22	23	7.2e-05	0.043	14.9	0.6	8	48	849	888	844	894	0.83
23	23	2.7	1.6e+03	0.3	0.3	17	43	886	912	885	917	0.81

Sequence Information

Coding Sequence: ATGCTGAACCACACCGGAGAGTATCCGTTCGATTGCCACCTGTGCGATCGCAAATTCCGACAGCGCACGAATCTAAAGCGGCACGTgctgacgcacaccggcgagaaaccgttcggttgcgaCGCCTGCGAGTACAAGTGCCTGGCGTTCGCGGATCTGAAACGGCACAAGCTGAAGCACGCCGACGCgaagccgttcagctgtgacgtctgcgattataaatgccggtgGCTCGGAAATTTGAAGGAACATAAGATGAGGcacgccgacgagaagccgttccgTTGCAAGCTTTGCGATTTGAAATTTCTgTATCAACGCGTCAACTCCGACAACAAGAAGACACACGACTGCAAGATATGCGGCGTTAAATTTCAACGTCCCGTACATTTGCGCAATCATTCCCTgacacacaccggcgagaagcctttcggttgtgacctttgcgatttccAATGTCGACTGCTCGGAAACCTGAAGCAGCACAAGTTAAgccacaccggcgagaaaccgttcgccTGCGACCTGTGCGACTATAAAAGCCGAAACGTCTCGAATCTAAAGCGGCACAGGCTcaagcacaccggcgagaaacctttTTGCTGCGGCCTGTGCGGCTATAAATGCCGGGAGCTCGGAAATTTGCGGCAGCACGAGTTGAAACACacggacgagaagccgttcagctgtgacctttgcgattataggGGGCGCACGCACGGGAACTTCAAGAATCACATGTTAAAGCACACCGAGGGGAAGTTGCTGCGCTGCGATGCCTGCGATTATACGTGCCGACAGCTCGCGTACTTGAACCAGCACAGGTtaaaacacaccgacgagaagcggTTCGGTTGTgacgtttgcgattataagtgccgacgGTTCGCAGCTTTGAAGCGGCACGTGTTAAGACActccgacgagaaaccgttcagctgtgacGATTGCGGTTATAAATGCCGAGATCCATCGACCTTGAAGCAGCACAGgcGGCAACAAATCCCTGAAGTCGAAGCGCTCCTccaaaaaacatttgaatgccGGATATGTCGCTCGAAATTAAAATCTCGCAGAAACCTGCGCGGTCACATCCTGATgcataccggcgagaagccgttcagttgcgacctCTGCGACTACAAATGCCGAGATCTCGGAAACTTGCGCCAGCACCAGCTAAAACACACCGATGATAAGCCGCTTAACTGTAATTTATGCGACTATAAATGTCGACGCATCCAAAACTTAAAACGACACAAGCtaaaacacaccgacgagaaaccgttaggatgcgacctctgcgattataaatgccgacagccGGGGCGTTTGAAACAGCACAAGTtgaagcacaccgacgagaagccgttgaGCTGTGATGAATGCGATTATAAGTGTCGGCATCTCGCGTCTCTGAAACTGCACAAGTTGGAACACGCCGACGCGAAGCCGCTCAGTTGTAACTTCTGCGAGTATAAGTGTCGGCGCTTGCAGAATTTGAAGCGTCACATGCTAAAacacaccgatgagaagccgctgagttgtgacctctgcgattataaatgtcgacggcCCGGACATCTAAAGctgcacaagttaaagcacaccgacgagaaaccctACACCTGTGATGTGTGCGGTTTTAAATGCCGGCAGGTCGCGTATTTGCGACGGCACAAGCTGAAGCACTCCGACGAGAAGCCCttcagttgcgatctttgcgattacaaatgccgacaggCCGGGCACTTGAAGGAGCACAAGTTGAAGCATACCGGCGACAGGCCTTTTGGCTGTAGCGTTTGCGATTTCAACGGGCGACAGTATTGGGATTTGAAAATTCATATGTTGGTGCACACAGGCGAAatgccgttcagttgtgacgtctgcgattataagtgccgacaGCTTGGGAACTTGAAAGTGCACAAGTTGAAGCACACCGAGGAGAAGTCGTTCGGGTGCCAACGCATCGctaaatcaaaaacaacgaaCAAATACGCGGTCAAATGCCAGATTTGTCACTTAAAGGTAAAAAATCGCACTTACTTGCGCACTCACATCTTgagacacaccggcgagaagccgttcagctgcgacGTTTGCGACTACAAGTGCCGACAACACGGACAGCTGAAGCAGCACAGGCTAAAGCACCGCGTCGACAAGCCGTTGAGTTGCAacgtttgcgattataagtgcacGTACTTTACAAGCTTGAAGCTGCACAAGTTGGCGCATAAAGGCGAGAAACGGTTCACTTGCGACGcgtgcgattacaagtgccgcgAGTTCAGGCAAATGCAAGGCCACAAGTTAATGCACGCCGGCGAGAAGCCAATCagttgtgacctctgcgattttaaatgccgacTCGTCGAGAACCTGAGGAAGCACATGTGGAAAcacgccgacgagaagccgtacaGCTGTGATCTTTGCCAGTACAAATGTCGCTACCTCGTGAACTTGAAGAGGCACGAGCTGACGCACAACGTCAAGAAACCGTACAGTTGCGGCGTTTGCGATTTCAAGTGTCGCGATCCTACGGGTCTGAAGCGGCACGAATTGcagcacaccggcgagaagccgctgacttgcgatctttgcgattataagtgccggcaggtgggaaatttgaaacggcacaGGTTGAGACACACCAACGAGATGCCGGTGtgctgtgatctttgcgattataaatgccgcgACGCCACGGTTTTGAAACTGCATAAGTTGAAGCATGCCGGCGAGTGGTTCAGATGTGATATTTGCGAGTTCAAGTCTCAGTGGGCCACGTCATTGAAGAGACACGTTTTGAGcaagcataaaataaaatcggaaGTCGGAAAAACGGAAACGCCAACGTAA
Protein Sequence: MLNHTGEYPFDCHLCDRKFRQRTNLKRHVLTHTGEKPFGCDACEYKCLAFADLKRHKLKHADAKPFSCDVCDYKCRWLGNLKEHKMRHADEKPFRCKLCDLKFLYQRVNSDNKKTHDCKICGVKFQRPVHLRNHSLTHTGEKPFGCDLCDFQCRLLGNLKQHKLSHTGEKPFACDLCDYKSRNVSNLKRHRLKHTGEKPFCCGLCGYKCRELGNLRQHELKHTDEKPFSCDLCDYRGRTHGNFKNHMLKHTEGKLLRCDACDYTCRQLAYLNQHRLKHTDEKRFGCDVCDYKCRRFAALKRHVLRHSDEKPFSCDDCGYKCRDPSTLKQHRRQQIPEVEALLQKTFECRICRSKLKSRRNLRGHILMHTGEKPFSCDLCDYKCRDLGNLRQHQLKHTDDKPLNCNLCDYKCRRIQNLKRHKLKHTDEKPLGCDLCDYKCRQPGRLKQHKLKHTDEKPLSCDECDYKCRHLASLKLHKLEHADAKPLSCNFCEYKCRRLQNLKRHMLKHTDEKPLSCDLCDYKCRRPGHLKLHKLKHTDEKPYTCDVCGFKCRQVAYLRRHKLKHSDEKPFSCDLCDYKCRQAGHLKEHKLKHTGDRPFGCSVCDFNGRQYWDLKIHMLVHTGEMPFSCDVCDYKCRQLGNLKVHKLKHTEEKSFGCQRIAKSKTTNKYAVKCQICHLKVKNRTYLRTHILRHTGEKPFSCDVCDYKCRQHGQLKQHRLKHRVDKPLSCNVCDYKCTYFTSLKLHKLAHKGEKRFTCDACDYKCREFRQMQGHKLMHAGEKPISCDLCDFKCRLVENLRKHMWKHADEKPYSCDLCQYKCRYLVNLKRHELTHNVKKPYSCGVCDFKCRDPTGLKRHELQHTGEKPLTCDLCDYKCRQVGNLKRHRLRHTNEMPVCCDLCDYKCRDATVLKLHKLKHAGEWFRCDICEFKSQWATSLKRHVLSKHKIKSEVGKTETPT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01258350;
90% Identity: iTF_01258350;
80% Identity: iTF_01258350;