Basic Information

Insect: Prosopocoilus inquinatus
Gene Symbol: -
Assembly: GCA_036172665.1
Location: CM069876.1:49500146-49506245[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 32 9.4e-06 0.00059 21.1 4.5 1 23 10 32 10 32 0.97

2 32 0.092 5.7 8.5 2.2 1 23 66 88 66 88 0.98

3 32 9.2 5.7e+02 2.2 0.4 1 10 94 103 94 104 0.93

4 32 0.00067 0.042 15.3 2.8 1 23 116 138 116 138 0.96

5 32 0.53 33 6.1 2.2 3 23 146 166 144 166 0.97

6 32 0.00043 0.027 15.9 1.4 1 23 172 194 172 194 0.97

7 32 0.047 2.9 9.4 3.9 1 23 200 222 200 222 0.96

8 32 0.0024 0.15 13.5 3.1 1 23 228 250 228 250 0.98

9 32 0.017 1 10.9 2.1 2 23 257 278 256 278 0.96

10 32 0.0049 0.31 12.5 1.8 3 23 286 306 284 306 0.97

11 32 0.00011 0.0068 17.7 2.0 1 21 312 332 312 333 0.96

12 32 0.035 2.2 9.9 1.1 1 23 346 368 346 368 0.98

13 32 0.00036 0.023 16.1 2.8 1 23 374 396 374 396 0.98

14 32 0.015 0.91 11.0 4.7 2 23 403 424 402 424 0.96

15 32 0.12 7.3 8.2 3.2 3 23 432 452 432 452 0.98

16 32 0.05 3.1 9.4 3.4 2 23 459 480 458 480 0.94

17 32 0.0018 0.11 13.9 5.1 2 23 487 508 486 508 0.96

18 32 0.0079 0.49 11.9 4.4 2 23 515 536 514 536 0.96

19 32 0.0028 0.17 13.3 3.3 1 23 542 564 542 564 0.98

20 32 0.0058 0.36 12.3 4.8 1 23 570 592 570 592 0.97

21 32 0.045 2.8 9.5 0.1 3 23 600 620 598 620 0.97

22 32 0.00088 0.055 14.9 2.7 1 23 626 648 626 648 0.97

23 32 0.0045 0.28 12.7 2.8 2 23 671 692 670 692 0.97

24 32 0.0056 0.35 12.4 6.0 1 23 698 720 698 720 0.98

25 32 0.16 9.9 7.8 2.8 2 23 727 748 726 748 0.94

26 32 8.8 5.5e+02 2.3 3.1 1 23 754 776 754 776 0.96

27 32 0.28 18 7.0 1.9 2 20 783 801 782 804 0.92

28 32 0.0045 0.28 12.6 3.6 1 23 810 832 810 832 0.98

29 32 0.0037 0.23 12.9 1.3 1 23 838 860 838 860 0.96

30 32 0.0016 0.1 14.1 2.9 2 23 867 888 866 888 0.96

31 32 0.82 52 5.5 3.9 3 23 896 916 894 916 0.95

32 32 2.4 1.5e+02 4.1 0.7 1 23 921 944 921 944 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	32	9.4e-06	0.00059	21.1	4.5	1	23	10	32	10	32	0.97
2	32	0.092	5.7	8.5	2.2	1	23	66	88	66	88	0.98
3	32	9.2	5.7e+02	2.2	0.4	1	10	94	103	94	104	0.93
4	32	0.00067	0.042	15.3	2.8	1	23	116	138	116	138	0.96
5	32	0.53	33	6.1	2.2	3	23	146	166	144	166	0.97
6	32	0.00043	0.027	15.9	1.4	1	23	172	194	172	194	0.97
7	32	0.047	2.9	9.4	3.9	1	23	200	222	200	222	0.96
8	32	0.0024	0.15	13.5	3.1	1	23	228	250	228	250	0.98
9	32	0.017	1	10.9	2.1	2	23	257	278	256	278	0.96
10	32	0.0049	0.31	12.5	1.8	3	23	286	306	284	306	0.97
11	32	0.00011	0.0068	17.7	2.0	1	21	312	332	312	333	0.96
12	32	0.035	2.2	9.9	1.1	1	23	346	368	346	368	0.98
13	32	0.00036	0.023	16.1	2.8	1	23	374	396	374	396	0.98
14	32	0.015	0.91	11.0	4.7	2	23	403	424	402	424	0.96
15	32	0.12	7.3	8.2	3.2	3	23	432	452	432	452	0.98
16	32	0.05	3.1	9.4	3.4	2	23	459	480	458	480	0.94
17	32	0.0018	0.11	13.9	5.1	2	23	487	508	486	508	0.96
18	32	0.0079	0.49	11.9	4.4	2	23	515	536	514	536	0.96
19	32	0.0028	0.17	13.3	3.3	1	23	542	564	542	564	0.98
20	32	0.0058	0.36	12.3	4.8	1	23	570	592	570	592	0.97
21	32	0.045	2.8	9.5	0.1	3	23	600	620	598	620	0.97
22	32	0.00088	0.055	14.9	2.7	1	23	626	648	626	648	0.97
23	32	0.0045	0.28	12.7	2.8	2	23	671	692	670	692	0.97
24	32	0.0056	0.35	12.4	6.0	1	23	698	720	698	720	0.98
25	32	0.16	9.9	7.8	2.8	2	23	727	748	726	748	0.94
26	32	8.8	5.5e+02	2.3	3.1	1	23	754	776	754	776	0.96
27	32	0.28	18	7.0	1.9	2	20	783	801	782	804	0.92
28	32	0.0045	0.28	12.6	3.6	1	23	810	832	810	832	0.98
29	32	0.0037	0.23	12.9	1.3	1	23	838	860	838	860	0.96
30	32	0.0016	0.1	14.1	2.9	2	23	867	888	866	888	0.96
31	32	0.82	52	5.5	3.9	3	23	896	916	894	916	0.95
32	32	2.4	1.5e+02	4.1	0.7	1	23	921	944	921	944	0.92

Sequence Information

Coding Sequence: ATGCTGAACCACACCGGAGAGTATCCGTTCGATTGCCACCTGTGCGATCGCAAATTCCGACAGCGCACGAATCTAAAGCGGCACGTgctgacgcacaccggcgagaaaccgttcggttgcgaCGCCTGCGAGTACAAGTGCCTGGCGTTCGCGGATCTGAAACGGCACAAGCTGAAGCACGCCGACGCgaagccgttcagctgtgacgtctgcgattataaatgccggtgGCTCGGAAATTTGAAGGAACATAAGATGAGGcacgccgacgagaagccgttccgTTGCAAGCTTTGCGATTTGAAATTTCTgTATCAACGCGTCAACTCCGACAACAAGAAGACACACGACTGCAAGATATGCGGCGTTAAATTTCAACGTCCCGTACATTTGCGCAATCATTCCCTgacacacaccggcgagaagcctttcggttgtgacctttgcgatttccAATGTCGACTGCTCGGAAACCTGAAGCAGCACAAGTTAAgccacaccggcgagaaaccgttcgccTGCGACCTGTGCGACTATAAAAGCCGAAACGTCTCGAATCTAAAGCGGCACAGGCTcaagcacaccggcgagaaacctttTTGCTGCGGCCTGTGCGGCTATAAATGCCGGGAGCTCGGAAATTTGCGGCAGCACGAGTTGAAACACacggacgagaagccgttcagctgtgacctttgcgattataggGGGCGCACGCACGGGAACTTCAAGAATCACATGTTAAAGCACACCGAGGGGAAGTTGCTGCGCTGCGATGCCTGCGATTATACGTGCCGACAGCTCGCGTACTTGAACCAGCACAGGTtaaaacacaccgacgagaagcggTTCGGTTGTgacgtttgcgattataagtgccgacgGTTCGCAGCTTTGAAGCGGCACGTGTTAAGACActccgacgagaaaccgttcagctgtgacGATTGCGGTTATAAATGCCGAGATCCATCGACCTTGAAGCAGCACAGgcGGCAACAAATCCCTGAAGTCGAAGCGCTCCTccaaaaaacatttgaatgccGGATATGTCGCTCGAAATTAAAATCTCGCAGAAACCTGCGCGGTCACATCCTGATgcataccggcgagaagccgttcagttgcgacctCTGCGACTACAAATGCCGAGATCTCGGAAACTTGCGCCAGCACCAGCTAAAACACACCGATGATAAGCCGCTTAACTGTAATTTATGCGACTATAAATGTCGACGCATCCAAAACTTAAAACGACACAAGCtaaaacacaccgacgagaaaccgttaggatgcgacctctgcgattataaatgccgacagccGGGGCGTTTGAAACAGCACAAGTtgaagcacaccgacgagaagccgttgaGCTGTGATGAATGCGATTATAAGTGTCGGCATCTCGCGTCTCTGAAACTGCACAAGTTGGAACACGCCGACGCGAAGCCGCTCAGTTGTAACTTCTGCGAGTATAAGTGTCGGCGCTTGCAGAATTTGAAGCGTCACATGCTAAAacacaccgatgagaagccgctgagttgtgacctctgcgattataaatgtcgacggcCCGGACATCTAAAGctgcacaagttaaagcacaccgacgagaaaccctACACCTGTGATGTGTGCGGTTTTAAATGCCGGCAGGTCGCGTATTTGCGACGGCACAAGCTGAAGCACTCCGACGAGAAGCCCttcagttgcgatctttgcgattacaaatgccgacaggCCGGGCACTTGAAGGAGCACAAGTTGAAGCATACCGGCGACAGGCCTTTTGGCTGTAGCGTTTGCGATTTCAACGGGCGACAGTATTGGGATTTGAAAATTCATATGTTGGTGCACACAGGCGAAatgccgttcagttgtgacgtctgcgattataagtgccgacaGCTTGGGAACTTGAAAGTGCACAAGTTGAAGCACACCGAGGAGAAGTCGTTCGGGTGCCAACGCATCGctaaatcaaaaacaacgaaCAAATACGCGGTCAAATGCCAGATTTGTCACTTAAAGGTAAAAAATCGCACTTACTTGCGCACTCACATCTTgagacacaccggcgagaagccgttcagctgcgacGTTTGCGACTACAAGTGCCGACAACACGGACAGCTGAAGCAGCACAGGCTAAAGCACCGCGTCGACAAGCCGTTGAGTTGCAacgtttgcgattataagtgcacGTACTTTACAAGCTTGAAGCTGCACAAGTTGGCGCATAAAGGCGAGAAACGGTTCACTTGCGACGcgtgcgattacaagtgccgcgAGTTCAGGCAAATGCAAGGCCACAAGTTAATGCACGCCGGCGAGAAGCCAATCagttgtgacctctgcgattttaaatgccgacTCGTCGAGAACCTGAGGAAGCACATGTGGAAAcacgccgacgagaagccgtacaGCTGTGATCTTTGCCAGTACAAATGTCGCTACCTCGTGAACTTGAAGAGGCACGAGCTGACGCACAACGTCAAGAAACCGTACAGTTGCGGCGTTTGCGATTTCAAGTGTCGCGATCCTACGGGTCTGAAGCGGCACGAATTGcagcacaccggcgagaagccgctgacttgcgatctttgcgattataagtgccggcaggtgggaaatttgaaacggcacaGGTTGAGACACACCAACGAGATGCCGGTGtgctgtgatctttgcgattataaatgccgcgACGCCACGGTTTTGAAACTGCATAAGTTGAAGCATGCCGGCGAGTGGTTCAGATGTGATATTTGCGAGTTCAAGTCTCAGTGGGCCACGTCATTGAAGAGACACGTTTTGAGcaagcataaaataaaatcggaaGTCGGAAAAACGGAAACGCCAACGTAA
Protein Sequence: MLNHTGEYPFDCHLCDRKFRQRTNLKRHVLTHTGEKPFGCDACEYKCLAFADLKRHKLKHADAKPFSCDVCDYKCRWLGNLKEHKMRHADEKPFRCKLCDLKFLYQRVNSDNKKTHDCKICGVKFQRPVHLRNHSLTHTGEKPFGCDLCDFQCRLLGNLKQHKLSHTGEKPFACDLCDYKSRNVSNLKRHRLKHTGEKPFCCGLCGYKCRELGNLRQHELKHTDEKPFSCDLCDYRGRTHGNFKNHMLKHTEGKLLRCDACDYTCRQLAYLNQHRLKHTDEKRFGCDVCDYKCRRFAALKRHVLRHSDEKPFSCDDCGYKCRDPSTLKQHRRQQIPEVEALLQKTFECRICRSKLKSRRNLRGHILMHTGEKPFSCDLCDYKCRDLGNLRQHQLKHTDDKPLNCNLCDYKCRRIQNLKRHKLKHTDEKPLGCDLCDYKCRQPGRLKQHKLKHTDEKPLSCDECDYKCRHLASLKLHKLEHADAKPLSCNFCEYKCRRLQNLKRHMLKHTDEKPLSCDLCDYKCRRPGHLKLHKLKHTDEKPYTCDVCGFKCRQVAYLRRHKLKHSDEKPFSCDLCDYKCRQAGHLKEHKLKHTGDRPFGCSVCDFNGRQYWDLKIHMLVHTGEMPFSCDVCDYKCRQLGNLKVHKLKHTEEKSFGCQRIAKSKTTNKYAVKCQICHLKVKNRTYLRTHILRHTGEKPFSCDVCDYKCRQHGQLKQHRLKHRVDKPLSCNVCDYKCTYFTSLKLHKLAHKGEKRFTCDACDYKCREFRQMQGHKLMHAGEKPISCDLCDFKCRLVENLRKHMWKHADEKPYSCDLCQYKCRYLVNLKRHELTHNVKKPYSCGVCDFKCRDPTGLKRHELQHTGEKPLTCDLCDYKCRQVGNLKRHRLRHTNEMPVCCDLCDYKCRDATVLKLHKLKHAGEWFRCDICEFKSQWATSLKRHVLSKHKIKSEVGKTETPT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01258874;
90% Identity: iTF_01258874;
80% Identity: iTF_01258874;