Basic Information

Insect: Prosopocoilus inquinatus
Gene Symbol: -
Assembly: GCA_036172665.1
Location: CM069876.1:46984562-46992773[+]

Transcription Factor Domain

TF Family: zf-GAGA
Domain: zf-GAGA domain
PFAM: PF09237
TF Group: Zinc-Coordinating Group
Description: Members of this family bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 24 0.78 4.6e+02 2.0 0.2 22 43 7 28 4 32 0.90

2 24 3.5 2.1e+03 -0.1 0.2 21 43 34 56 27 65 0.80

3 24 1.8 1.1e+03 0.8 0.0 21 44 62 85 59 90 0.86

4 24 0.0025 1.5 10.0 0.1 20 47 90 116 87 119 0.88

5 24 0.061 36 5.5 0.5 21 46 119 143 116 147 0.88

6 24 0.11 67 4.7 0.1 21 52 148 179 145 181 0.87

7 24 1.5 9.1e+02 1.0 0.2 22 52 198 228 188 229 0.82

8 24 5.4 3.2e+03 -0.7 0.0 23 52 229 258 224 259 0.84

9 24 0.0004 0.24 12.5 0.4 10 44 284 318 272 328 0.78

10 24 5.6 3.3e+03 -0.8 0.0 21 43 323 345 319 354 0.86

11 24 0.75 4.4e+02 2.0 0.0 20 44 350 374 342 380 0.85

12 24 0.03 18 6.5 0.5 21 48 380 406 376 408 0.89

13 24 0.0062 3.7 8.7 0.4 21 46 408 432 405 437 0.89

14 24 5.6 3.3e+03 -0.8 0.2 26 48 442 463 439 467 0.84

15 24 1.5 8.7e+02 1.1 0.2 22 52 487 517 476 519 0.82

16 24 4.9 2.9e+03 -0.6 0.0 23 52 518 547 513 548 0.85

17 24 0.0013 0.78 10.9 0.1 20 44 580 604 571 614 0.84

18 24 8.3 4.9e+03 -1.3 0.0 22 43 610 631 606 637 0.86

19 24 0.01 6 8.0 0.1 20 44 636 660 626 665 0.87

20 24 0.0051 3 9.0 0.3 21 43 665 687 662 693 0.89

21 24 0.22 1.3e+02 3.8 0.0 21 44 693 716 688 721 0.88

22 24 0.34 2e+02 3.1 0.2 21 48 722 748 718 750 0.89

23 24 0.012 7 7.8 0.2 21 47 750 775 748 780 0.88

24 24 0.75 4.4e+02 2.0 0.2 23 51 822 850 816 873 0.86

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	24	0.78	4.6e+02	2.0	0.2	22	43	7	28	4	32	0.90
2	24	3.5	2.1e+03	-0.1	0.2	21	43	34	56	27	65	0.80
3	24	1.8	1.1e+03	0.8	0.0	21	44	62	85	59	90	0.86
4	24	0.0025	1.5	10.0	0.1	20	47	90	116	87	119	0.88
5	24	0.061	36	5.5	0.5	21	46	119	143	116	147	0.88
6	24	0.11	67	4.7	0.1	21	52	148	179	145	181	0.87
7	24	1.5	9.1e+02	1.0	0.2	22	52	198	228	188	229	0.82
8	24	5.4	3.2e+03	-0.7	0.0	23	52	229	258	224	259	0.84
9	24	0.0004	0.24	12.5	0.4	10	44	284	318	272	328	0.78
10	24	5.6	3.3e+03	-0.8	0.0	21	43	323	345	319	354	0.86
11	24	0.75	4.4e+02	2.0	0.0	20	44	350	374	342	380	0.85
12	24	0.03	18	6.5	0.5	21	48	380	406	376	408	0.89
13	24	0.0062	3.7	8.7	0.4	21	46	408	432	405	437	0.89
14	24	5.6	3.3e+03	-0.8	0.2	26	48	442	463	439	467	0.84
15	24	1.5	8.7e+02	1.1	0.2	22	52	487	517	476	519	0.82
16	24	4.9	2.9e+03	-0.6	0.0	23	52	518	547	513	548	0.85
17	24	0.0013	0.78	10.9	0.1	20	44	580	604	571	614	0.84
18	24	8.3	4.9e+03	-1.3	0.0	22	43	610	631	606	637	0.86
19	24	0.01	6	8.0	0.1	20	44	636	660	626	665	0.87
20	24	0.0051	3	9.0	0.3	21	43	665	687	662	693	0.89
21	24	0.22	1.3e+02	3.8	0.0	21	44	693	716	688	721	0.88
22	24	0.34	2e+02	3.1	0.2	21	48	722	748	718	750	0.89
23	24	0.012	7	7.8	0.2	21	47	750	775	748	780	0.88
24	24	0.75	4.4e+02	2.0	0.2	23	51	822	850	816	873	0.86

Sequence Information

Coding Sequence: ATGTTAACAcccaccgacgagaagccgttcatcTGCGACATTTGCGACTATAGGTGTCGGTACAAGGGAAACCTGCAACAGCACAAGTCGACGCACACGAGAGAGAGGCGGTTCAGctgcgacctctgcgattataagtgccggtTTAACAAGAACTTGCAGCAGCACAAGTTGACGCACACGGGTGAGAAGCCGTTGAATTGCggcctttgcgattacaaatgccgacagcTTACGCACTTGAAACTGCACATGTTTAAACACACCGGcagcgagaaaccgttcagttgtaaaCTATGCGATTACAAGTGCTTGCAGGCCGTGAATCTGAGGCGGCACGAGTTAATTCAcacgggcgagaagccgttcagctgtgacGTGTGCAGTTACAAGTGTCGACAATATTCGCGTTTGAGAGAGCACATGCTGAAACACACCGGCGGCGAGAAACCACAGAGTTGCAAAAATTGCGCTTACAAGTTCCGTTATAGTGGGGACATGAAACGTCACATTTTGAGACGTACCGGCGAAAAGCCCACTCGTTCGGACGAGGAACAATTGACGGCGAAGCGAGTGCAAACTTATACGGTTGAGGAGCGGTTCTGCTGCGGCGTTTGCAGTTACAAGAGTCGACAAGCCTCGCATTTGACGGCGCACTTATCCgtacataccggcgagaaaccgaaACCGATCAAATGTGGCGTTTGCGATTTCAGTTGTGAACAAATCGCGGATTTGAAGGCGCACGTTCAAACTCATGCCGTCGAAAAACCGTTTGGTTGTAACCTgAATCATCGGACTTCGAAAAACCAACCGAAGAACAAATCGAGCAAAATCCTAGACCCCGCCGCTGGTGTGAAACGTCGCAGGTCGACACCTACCGGTGAAAATCCATTCACTTGCGAGCTTTGCCCCTACAAAAGTCGAACGAGCGGAACTCTGAAAAGGCACatgttaacgcacaccgacgagaagccgttcagttgtgatcgttgcgattataaatgccggttCAAGACCAACCTGCAACAGCACCGGCTAACGCACACGGGAGAGAAGCCCTTGATTTGCGGCctctgcgattttaaatgtcgGCAAACCGCGAAGATGAAAGTGCACATGCTGAAACACACCggcggcgagaagccgttcagttgtaaactgtgcgattacaagtgcTGTCAAGCTGTGAATATGAGACGGCACGAGTTGACTCACACGGGCGAAAAGCCGTACAGTTGCGACGTGTGCGGTTACAAATGCCGGCAATCCGCGCGTTTGAGGGAGCACATGCTGAAACACACCGGCGGCGGTAAACGGCACAGTTGCAAATATTGCGCTTACAAGTCCCGTTATAGCGGGGACATGAAACGTCACATTTTGAGACACACCAGCGAAGAGTCCACTCGTTCGGACGATGAACAATTGACAGCGAAGCGCGTGCAAACTTGTACGGTTGAGAAGAGGTTCTGCTGCGGCGTTTGCAATTACAAGGGTCGACAAGCGTCGCATTTGACGGCGCACTTATCCgtacataccggcgagaaaccgaaACCGATCAAATGTGGCGTTTGCGATTTCAGCTGTGAACAAATCGCGGATTTGAAGGCGCACGTGCAAACTCACGCCATCGAAAAACCGTTTGGTTGTAACCTatgGCGTCGGACGTTGAACACCCAACCGGAAAATGACGTAACGACCAAATTTCAAGACGTCACCAAAGTGAAGCGAAGCGTATTaagcgagaagccgttcgcttgCAAACTTTGCCCCTACAAATGCCGACAGAGCGGAAACTTAAAAATACACGtgctaacgcacaccgacgacaagccgttcggttgcgacctctgcgattacaagtgccgatTAAGCGCGCGCTTAAAACAGCACAGGTTAACGCACACGACCGAAAAGCCGTTGACCTGCAGCATTTGCGGTTACAAATGCCGCCAGACCGGAGGAATGAAACAGCACAtgctaacgcacaccgacgagaaaccgttcggctgCGACATTTGCGACTACAGGTGCCGGCTGAAGAGAAACTTGCGCCAGCATAAGCTAACGCACACGGGGGAAAAGCCGTTGATCTGCGGCCTTTGCGATTTCAAATGCCGGCAAAGCGCGAAGATGAAGCTGCACATGTTGAAACACACGggcggcgagaaaccgttcgcttGCAAgttttgcgattacaagtgctgTCAAGCCGTCGACATGAGGCGGCATGAGCTGACGCACACGGGCgaaaaaccgttcagttgtgatctgtgcgattataaatgtcggcaATCCACGGGTTTGAGGCAGCACAGGTTGAAACACACAGGCGGCGGCGAAAAGCGATACAGTTGTGATTACTGCGGTTACAAGGCCCATCACAACGGAGTTATGAAGCGTCACGTTTTAAGACATGCCATCCGGGACTCCACTGGTGCCGACGAGAAACATTTGGCGACGAAGCCGTTCTGTTGCGGCGTTTGCAATTACAAGGGTCGGCAGGCCTCACATTTGACGGCGCACCTGCACGCCCATACCGGTGAGAAACCGGTGATCAAATGTGGCGTTTGCGATTTCAAGTGTGAGCAGGTCGCAGATTTGAAGGCGCACATGCAGACTCACGCAGGCGCAGTCGAGAAGACGTATAGCTGTGAGCTCTGCGATTTCCAGTGTCGGCGACTCTCAAATTTGACGACGCACATGTCGAGTCACGCCGGCGAGAAGCCGCttggttgtgatctttgcgactTCAGATGTCAACTGCGCGCGCATTTGATGGTACACATGCGCCGCACTCACGCCGTCGCCGTCGCGAAGGCGTTCAGCTGCGATCTCTGCGACTTCAAGTGTCAACAAGCCGCGTATTTGACGACGCACATGCGCACTCACACCGGCGAGATGCCGTTCAGTTGCGAGCTTTGCGATTTCACGAGTGAACAACGCGCAGATTTGTCGACGCACATTCGAACTCACACACACAACGACTTGCTGCATCGCATGCCGAAGAAGGATAAGAAGATTAAATGA
Protein Sequence: MLTPTDEKPFICDICDYRCRYKGNLQQHKSTHTRERRFSCDLCDYKCRFNKNLQQHKLTHTGEKPLNCGLCDYKCRQLTHLKLHMFKHTGSEKPFSCKLCDYKCLQAVNLRRHELIHTGEKPFSCDVCSYKCRQYSRLREHMLKHTGGEKPQSCKNCAYKFRYSGDMKRHILRRTGEKPTRSDEEQLTAKRVQTYTVEERFCCGVCSYKSRQASHLTAHLSVHTGEKPKPIKCGVCDFSCEQIADLKAHVQTHAVEKPFGCNLNHRTSKNQPKNKSSKILDPAAGVKRRRSTPTGENPFTCELCPYKSRTSGTLKRHMLTHTDEKPFSCDRCDYKCRFKTNLQQHRLTHTGEKPLICGLCDFKCRQTAKMKVHMLKHTGGEKPFSCKLCDYKCCQAVNMRRHELTHTGEKPYSCDVCGYKCRQSARLREHMLKHTGGGKRHSCKYCAYKSRYSGDMKRHILRHTSEESTRSDDEQLTAKRVQTCTVEKRFCCGVCNYKGRQASHLTAHLSVHTGEKPKPIKCGVCDFSCEQIADLKAHVQTHAIEKPFGCNLWRRTLNTQPENDVTTKFQDVTKVKRSVLSEKPFACKLCPYKCRQSGNLKIHVLTHTDDKPFGCDLCDYKCRLSARLKQHRLTHTTEKPLTCSICGYKCRQTGGMKQHMLTHTDEKPFGCDICDYRCRLKRNLRQHKLTHTGEKPLICGLCDFKCRQSAKMKLHMLKHTGGEKPFACKFCDYKCCQAVDMRRHELTHTGEKPFSCDLCDYKCRQSTGLRQHRLKHTGGGEKRYSCDYCGYKAHHNGVMKRHVLRHAIRDSTGADEKHLATKPFCCGVCNYKGRQASHLTAHLHAHTGEKPVIKCGVCDFKCEQVADLKAHMQTHAGAVEKTYSCELCDFQCRRLSNLTTHMSSHAGEKPLGCDLCDFRCQLRAHLMVHMRRTHAVAVAKAFSCDLCDFKCQQAAYLTTHMRTHTGEMPFSCELCDFTSEQRADLSTHIRTHTHNDLLHRMPKKDKKIK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01258316;
90% Identity: iTF_01258316;
80% Identity: iTF_01258316;