Basic Information

Insect: Prosopocoilus inquinatus
Gene Symbol: -
Assembly: GCA_036172665.1
Location: CM069876.1:49202634-49206961[+]

Transcription Factor Domain

TF Family: zf-GAGA
Domain: zf-GAGA domain
PFAM: PF09237
TF Group: Zinc-Coordinating Group
Description: Members of this family bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 27 0.27 1.6e+02 3.5 0.1 21 48 10 36 3 48 0.87

2 27 0.016 9.3 7.4 0.1 21 48 66 92 51 97 0.87

3 27 1.6 9.4e+02 1.0 0.2 26 43 127 144 124 150 0.89

4 27 0.72 4.3e+02 2.1 1.6 13 49 142 177 134 182 0.80

5 27 2 1.2e+03 0.7 0.1 18 43 175 200 170 209 0.79

6 27 0.21 1.2e+02 3.8 0.1 23 46 208 232 201 240 0.82

7 27 1.2 7.1e+02 1.4 0.2 22 44 281 303 276 307 0.85

8 27 0.069 41 5.4 0.1 21 48 308 334 303 339 0.87

9 27 1.9 1.1e+03 0.7 0.1 21 43 336 358 331 363 0.87

10 27 0.053 31 5.7 1.4 20 49 363 391 346 396 0.85

11 27 1.3 8e+02 1.2 0.1 18 44 389 415 387 425 0.85

12 27 7.1 4.2e+03 -1.1 0.1 21 43 420 442 412 448 0.84

13 27 0.025 15 6.8 0.3 20 49 447 475 436 480 0.86

14 27 8.4 5e+03 -1.3 0.4 21 48 504 530 498 535 0.85

15 27 0.00061 0.36 11.9 0.1 5 48 590 632 586 638 0.84

16 27 2.4 1.4e+03 0.4 0.0 21 43 634 656 629 660 0.87

17 27 0.014 8.1 7.6 0.0 21 43 662 684 655 689 0.88

18 27 0.012 7.3 7.8 0.0 21 43 690 712 687 717 0.90

19 27 0.065 38 5.4 0.0 20 48 717 744 711 751 0.82

20 27 0.6 3.5e+02 2.4 0.0 21 43 791 813 788 819 0.87

21 27 0.0056 3.3 8.8 0.1 18 49 816 847 812 851 0.81

22 27 0.95 5.7e+02 1.7 0.0 21 43 847 869 844 875 0.86

23 27 0.013 7.6 7.7 0.1 20 46 874 900 862 906 0.82

24 27 1.2 7e+02 1.4 0.0 23 44 905 926 902 934 0.85

25 27 0.77 4.6e+02 2.0 0.1 21 43 931 953 928 958 0.90

26 27 0.33 2e+02 3.2 0.0 20 48 958 985 951 988 0.83

27 27 0.073 43 5.3 1.5 21 48 987 1013 979 1019 0.82

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	27	0.27	1.6e+02	3.5	0.1	21	48	10	36	3	48	0.87
2	27	0.016	9.3	7.4	0.1	21	48	66	92	51	97	0.87
3	27	1.6	9.4e+02	1.0	0.2	26	43	127	144	124	150	0.89
4	27	0.72	4.3e+02	2.1	1.6	13	49	142	177	134	182	0.80
5	27	2	1.2e+03	0.7	0.1	18	43	175	200	170	209	0.79
6	27	0.21	1.2e+02	3.8	0.1	23	46	208	232	201	240	0.82
7	27	1.2	7.1e+02	1.4	0.2	22	44	281	303	276	307	0.85
8	27	0.069	41	5.4	0.1	21	48	308	334	303	339	0.87
9	27	1.9	1.1e+03	0.7	0.1	21	43	336	358	331	363	0.87
10	27	0.053	31	5.7	1.4	20	49	363	391	346	396	0.85
11	27	1.3	8e+02	1.2	0.1	18	44	389	415	387	425	0.85
12	27	7.1	4.2e+03	-1.1	0.1	21	43	420	442	412	448	0.84
13	27	0.025	15	6.8	0.3	20	49	447	475	436	480	0.86
14	27	8.4	5e+03	-1.3	0.4	21	48	504	530	498	535	0.85
15	27	0.00061	0.36	11.9	0.1	5	48	590	632	586	638	0.84
16	27	2.4	1.4e+03	0.4	0.0	21	43	634	656	629	660	0.87
17	27	0.014	8.1	7.6	0.0	21	43	662	684	655	689	0.88
18	27	0.012	7.3	7.8	0.0	21	43	690	712	687	717	0.90
19	27	0.065	38	5.4	0.0	20	48	717	744	711	751	0.82
20	27	0.6	3.5e+02	2.4	0.0	21	43	791	813	788	819	0.87
21	27	0.0056	3.3	8.8	0.1	18	49	816	847	812	851	0.81
22	27	0.95	5.7e+02	1.7	0.0	21	43	847	869	844	875	0.86
23	27	0.013	7.6	7.7	0.1	20	46	874	900	862	906	0.82
24	27	1.2	7e+02	1.4	0.0	23	44	905	926	902	934	0.85
25	27	0.77	4.6e+02	2.0	0.1	21	43	931	953	928	958	0.90
26	27	0.33	2e+02	3.2	0.0	20	48	958	985	951	988	0.83
27	27	0.073	43	5.3	1.5	21	48	987	1013	979	1019	0.82

Sequence Information

Coding Sequence: ATGAAAAAGCACAAACTGATACActccgacgagaagccgttcggctgCGACCTCTGCGAATTCAACTGCCGACACCTCGAGGGTTTGCGACGGCACAAGCTAAAACActccgacgagaagccgttcagctgcgatctttgcgatttcaAGTGCCAACACCTCGGAAGTTTCAAACGCCACCAGCTAActcacaccgacgagaagccgttcagttgcgacctctgcgattataaatgccggcaaTCCGGAAACATGAAAACGCACAAGTTGAAACACGCCGATGAGAAACAGTTCGCTTGTGACCTCTGCGACTTCAGATGTCGAATTCCTGAAACCTTGAAGCAGCACAAGTATAAACACATCGACCTGAAGTTGTACAGCTGTGATCTTTGCTACTTCAAATCTCGTCGCCCGTCGAGTTTAAAACGGCACCGGTTAACACACAACGATGATAGGCCGTTCAGCTGCGACCTTTGCGAGTACAAATGCCGACTTGCTGCTTATCTCAAGCGGCACAAGTTaaggcacaccgacgagaaaccgttcgcctgtgacgtctgcgattttaaatgtcgaGATGTGGGAAGTTTGAAGCTGCACAAGTTGAAACATACGGGCGGGAAGCCGCTTGGTTGTGACCTGTGCGATGTCAGATTCCGTTACCCACGAAGTTTAAAACGGCACAAGTTGAAGttgcacaccgacgagaagccgttcgggtGTGAGCTTTGCGATTTCAGGTGCCGAAAGCTCGGGAGTTTGGAAGGGCACAAGGTGAAGCACACCGTCGAGAAACTGTTCCTCTGCGGCCGTTGCGGgtgtCTAGCTCAAACCGTGAATGAAACAACGCCCACGTGCCGGATATGTGATACTGAGTTTGCGTCGCTTCGATATTTGCGAAGTCACATCTTAAcacataccggcgagaagccaCTCGCTTGTGatatttgcgattataaatgccggtaCGCCGGAGAGTTGAAACGGCACAAGCTGAAACACTCCGATGAGAAACCGTTCGGCTGTGACCTCTGTGATTATAGATGTCGACACGTCGTAGCTCTGAAGCGTCATAAgctgatacacaccggcgagcaACCATACAGCTGTGACTTATGCGAATACAAATGCCGCCTTGGTACAACCTTGAAGCGGCACAAGTTAAGacacaccaacgagaaaccgttcagttgtgatcacTGCGATTTCAGATGCCGCGAGTTTGGAAACCTGAAGCAGCACAAGTTAACACACACCCAGGAGAAGCCTTTCAGTTGCGATCAGTGCGACTACAAATGCCGACTGTCGGTGACTTTGAAGCAGCACCGCCTGACACACACCGGCGAGACCCCGTACAGTTGcaatctttgcgattataaatgccggcagCTTTCGAATTTGAAGCAGCACGAGCTGAACCACACCGGCCgcaagccgttcagttgcgaccGTTGCGAGTACAAGTGCCGATTCGCCGTGAATCTGAAATACCACAAGCTGAAACACACCGGCGAGGCGCCGTTCGCTTGCGATCGCTGCGATTACAGATGCCGAATCGCCTGCAGTTTGAAGCAGCACATGTTgagacacaccgacgagaaaccgttcggctgccatctttgcgattataggTGTTTTCAACTGACCCCTATAATCGAAGCAACGCGCAAAGGAATACTCGTTTCTAAATTGTTCACGCCCGACCACAAGCACGTTTCGCCGCCCCACACCGGCGAGATGCAGTTCACTTGTGACTTTTGCGCTTATAAATGCCGACATTTCGGAAACATGAAGAAGCACAGGTTGACGCActccgacgagaagccgttcgcttgCGACCTCTGCGGTTATAAATGCCGGCAGTCGGGGAACATGAAGaagcacaagttaaagcacaccgacgagaagccttttggttgcgacctctgcgattataagtgccgacaGGCCGGTGATATTAAGACGCACAGGTTAACGCACTCCGACGAGAAGCCTTTCggttgtgatctgtgcgattataaatgccggcagTCCGGAAATATGAAGAAGCACAAGCTGACGCACTCCGgggagaagccgttcagttgcgatctttgcgattataaatgcagaCAATCCGGGAATATGAAGAAGCACAGGCTAACGCATTCCGACGAAAAACCcttcagttgtgatctctgcgattataaatgtcgacagtcCGGAGATATGAAAGAGCACAAGCtgaaacacaccgacgagaagccattcagttgtgatctttgcgagcATCAATGGCCCCCCGTGCTTAAAAAAACATTCGAATGCGACAAATGCGATTCTAAATTTACATCTCGAGCGCAACTGCGCAAACATGTCCTCGTACACACCGACGAAAAGCCGTTCGCttgcgacctttgcgattacaaatgtcgcCTGGGTAAATACCTGAAACGGCACAGGTTgaagcacaccggcgagaagccgttcagctgtgatctttgcgattataaatgccgacaatcCGGAAACATGAAGCTGCACGTGTTAATACACACCgccgagaagccgttcggctgtgatctctgcgattataaatgtcgccAGGCGGGAACCTTGAAAGTGCACAAGCTGAAGCACgccaacgagaagccgttcggatGCGATTCctgcgattataagtgtcgaTATCAGAGAAACTTGAAGAGGCACAAGATGATGCACACCGACTTGAAGCCGTTCCGctgcgacctctgcgattataaatttcGAGAGGCCAGGCATCTGAAAGAGCACATgctaacgcacaccggcgagaagcccttGAGTTGCGATctatgcgattataaatgtcgataCCACGGGAACTTGAAAAAGCACAGgttaatacacaccgacgagaagccatACGGTTGCGATCTCTGCGAGTATAAGTGCCGACAGGTCGGCAGCTTGAAGAAACACAAGTTGAAACATGCCGACGATGAACCGTTCCGTTGCGATCGCTGCAATTATAAATGCCGAGAGGTCAGGAACCTGAAAAGACATCAATtgaaacacaccgacgagaagccgttcagatGTGGTCTTTGCGATTACATATGCGAAAGTTACGGAGATTTGGAAATACACGCGTTGGTACACAATGGCTAG
Protein Sequence: MKKHKLIHSDEKPFGCDLCEFNCRHLEGLRRHKLKHSDEKPFSCDLCDFKCQHLGSFKRHQLTHTDEKPFSCDLCDYKCRQSGNMKTHKLKHADEKQFACDLCDFRCRIPETLKQHKYKHIDLKLYSCDLCYFKSRRPSSLKRHRLTHNDDRPFSCDLCEYKCRLAAYLKRHKLRHTDEKPFACDVCDFKCRDVGSLKLHKLKHTGGKPLGCDLCDVRFRYPRSLKRHKLKLHTDEKPFGCELCDFRCRKLGSLEGHKVKHTVEKLFLCGRCGCLAQTVNETTPTCRICDTEFASLRYLRSHILTHTGEKPLACDICDYKCRYAGELKRHKLKHSDEKPFGCDLCDYRCRHVVALKRHKLIHTGEQPYSCDLCEYKCRLGTTLKRHKLRHTNEKPFSCDHCDFRCREFGNLKQHKLTHTQEKPFSCDQCDYKCRLSVTLKQHRLTHTGETPYSCNLCDYKCRQLSNLKQHELNHTGRKPFSCDRCEYKCRFAVNLKYHKLKHTGEAPFACDRCDYRCRIACSLKQHMLRHTDEKPFGCHLCDYRCFQLTPIIEATRKGILVSKLFTPDHKHVSPPHTGEMQFTCDFCAYKCRHFGNMKKHRLTHSDEKPFACDLCGYKCRQSGNMKKHKLKHTDEKPFGCDLCDYKCRQAGDIKTHRLTHSDEKPFGCDLCDYKCRQSGNMKKHKLTHSGEKPFSCDLCDYKCRQSGNMKKHRLTHSDEKPFSCDLCDYKCRQSGDMKEHKLKHTDEKPFSCDLCEHQWPPVLKKTFECDKCDSKFTSRAQLRKHVLVHTDEKPFACDLCDYKCRLGKYLKRHRLKHTGEKPFSCDLCDYKCRQSGNMKLHVLIHTAEKPFGCDLCDYKCRQAGTLKVHKLKHANEKPFGCDSCDYKCRYQRNLKRHKMMHTDLKPFRCDLCDYKFREARHLKEHMLTHTGEKPLSCDLCDYKCRYHGNLKKHRLIHTDEKPYGCDLCEYKCRQVGSLKKHKLKHADDEPFRCDRCNYKCREVRNLKRHQLKHTDEKPFRCGLCDYICESYGDLEIHALVHNG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01258374;
90% Identity: iTF_01258374;
80% Identity: iTF_01258374;