Pinq024402.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Prosopocoilus inquinatus
Gene Symbol
-
Assembly
GCA_036172665.1
Location
CM069876.1:49202634-49206961[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 34 1.5 91 4.8 4.5 3 23 16 36 14 36 0.97
2 34 0.12 7.3 8.2 6.3 1 23 42 64 42 64 0.98
3 34 0.01 0.65 11.5 4.5 1 23 70 92 70 92 0.97
4 34 0.31 19 6.9 2.7 1 23 98 120 98 120 0.96
5 34 0.0011 0.066 14.6 2.5 1 23 126 148 126 148 0.98
6 34 0.059 3.7 9.1 3.2 1 23 154 176 154 176 0.97
7 34 0.038 2.4 9.7 1.6 1 23 182 204 182 204 0.97
8 34 0.0025 0.16 13.4 1.2 3 23 212 233 212 233 0.97
9 34 2.7 1.7e+02 3.9 1.6 3 23 241 261 239 261 0.95
10 34 0.00045 0.028 15.8 0.5 2 23 285 306 285 306 0.98
11 34 0.0013 0.083 14.3 1.4 3 23 314 334 312 334 0.96
12 34 0.11 7 8.3 2.8 3 23 342 362 340 362 0.97
13 34 0.92 58 5.4 4.0 1 23 368 390 368 390 0.98
14 34 0.057 3.6 9.2 6.4 1 23 396 418 396 418 0.98
15 34 0.018 1.1 10.8 4.0 1 23 424 446 424 446 0.98
16 34 0.00094 0.059 14.8 3.6 1 23 452 474 452 474 0.96
17 34 0.34 21 6.8 4.8 1 23 480 502 480 502 0.97
18 34 0.11 6.7 8.3 4.7 1 23 508 530 508 530 0.97
19 34 0.81 51 5.6 7.7 1 23 582 604 582 604 0.98
20 34 0.0021 0.13 13.7 3.5 1 23 610 632 610 632 0.97
21 34 0.045 2.8 9.5 1.5 3 23 640 660 638 660 0.98
22 34 0.0096 0.6 11.6 3.5 3 23 668 688 666 688 0.98
23 34 0.001 0.065 14.7 4.4 1 23 694 716 694 716 0.98
24 34 0.02 1.2 10.6 3.3 1 23 722 744 722 744 0.97
25 34 5.2e-05 0.0033 18.7 0.8 1 23 767 789 767 789 0.98
26 34 0.24 15 7.2 3.8 1 23 795 817 795 817 0.97
27 34 0.0032 0.2 13.1 1.7 1 23 823 845 823 845 0.97
28 34 0.018 1.1 10.7 1.9 3 23 853 873 851 873 0.97
29 34 0.014 0.88 11.1 4.5 3 23 881 901 879 901 0.97
30 34 3.5e-05 0.0022 19.3 2.8 1 23 907 929 907 929 0.99
31 34 0.0097 0.61 11.6 4.7 2 23 936 957 935 957 0.96
32 34 0.12 7.5 8.2 2.6 3 23 965 985 963 985 0.97
33 34 0.023 1.5 10.4 5.7 1 23 991 1013 991 1013 0.98
34 34 0.028 1.8 10.2 0.1 1 23 1019 1041 1019 1041 0.97

Sequence Information

Coding Sequence
ATGAAAAAGCACAAACTGATACActccgacgagaagccgttcggctgCGACCTCTGCGAATTCAACTGCCGACACCTCGAGGGTTTGCGACGGCACAAGCTAAAACActccgacgagaagccgttcagctgcgatctttgcgatttcaAGTGCCAACACCTCGGAAGTTTCAAACGCCACCAGCTAActcacaccgacgagaagccgttcagttgcgacctctgcgattataaatgccggcaaTCCGGAAACATGAAAACGCACAAGTTGAAACACGCCGATGAGAAACAGTTCGCTTGTGACCTCTGCGACTTCAGATGTCGAATTCCTGAAACCTTGAAGCAGCACAAGTATAAACACATCGACCTGAAGTTGTACAGCTGTGATCTTTGCTACTTCAAATCTCGTCGCCCGTCGAGTTTAAAACGGCACCGGTTAACACACAACGATGATAGGCCGTTCAGCTGCGACCTTTGCGAGTACAAATGCCGACTTGCTGCTTATCTCAAGCGGCACAAGTTaaggcacaccgacgagaaaccgttcgcctgtgacgtctgcgattttaaatgtcgaGATGTGGGAAGTTTGAAGCTGCACAAGTTGAAACATACGGGCGGGAAGCCGCTTGGTTGTGACCTGTGCGATGTCAGATTCCGTTACCCACGAAGTTTAAAACGGCACAAGTTGAAGttgcacaccgacgagaagccgttcgggtGTGAGCTTTGCGATTTCAGGTGCCGAAAGCTCGGGAGTTTGGAAGGGCACAAGGTGAAGCACACCGTCGAGAAACTGTTCCTCTGCGGCCGTTGCGGgtgtCTAGCTCAAACCGTGAATGAAACAACGCCCACGTGCCGGATATGTGATACTGAGTTTGCGTCGCTTCGATATTTGCGAAGTCACATCTTAAcacataccggcgagaagccaCTCGCTTGTGatatttgcgattataaatgccggtaCGCCGGAGAGTTGAAACGGCACAAGCTGAAACACTCCGATGAGAAACCGTTCGGCTGTGACCTCTGTGATTATAGATGTCGACACGTCGTAGCTCTGAAGCGTCATAAgctgatacacaccggcgagcaACCATACAGCTGTGACTTATGCGAATACAAATGCCGCCTTGGTACAACCTTGAAGCGGCACAAGTTAAGacacaccaacgagaaaccgttcagttgtgatcacTGCGATTTCAGATGCCGCGAGTTTGGAAACCTGAAGCAGCACAAGTTAACACACACCCAGGAGAAGCCTTTCAGTTGCGATCAGTGCGACTACAAATGCCGACTGTCGGTGACTTTGAAGCAGCACCGCCTGACACACACCGGCGAGACCCCGTACAGTTGcaatctttgcgattataaatgccggcagCTTTCGAATTTGAAGCAGCACGAGCTGAACCACACCGGCCgcaagccgttcagttgcgaccGTTGCGAGTACAAGTGCCGATTCGCCGTGAATCTGAAATACCACAAGCTGAAACACACCGGCGAGGCGCCGTTCGCTTGCGATCGCTGCGATTACAGATGCCGAATCGCCTGCAGTTTGAAGCAGCACATGTTgagacacaccgacgagaaaccgttcggctgccatctttgcgattataggTGTTTTCAACTGACCCCTATAATCGAAGCAACGCGCAAAGGAATACTCGTTTCTAAATTGTTCACGCCCGACCACAAGCACGTTTCGCCGCCCCACACCGGCGAGATGCAGTTCACTTGTGACTTTTGCGCTTATAAATGCCGACATTTCGGAAACATGAAGAAGCACAGGTTGACGCActccgacgagaagccgttcgcttgCGACCTCTGCGGTTATAAATGCCGGCAGTCGGGGAACATGAAGaagcacaagttaaagcacaccgacgagaagccttttggttgcgacctctgcgattataagtgccgacaGGCCGGTGATATTAAGACGCACAGGTTAACGCACTCCGACGAGAAGCCTTTCggttgtgatctgtgcgattataaatgccggcagTCCGGAAATATGAAGAAGCACAAGCTGACGCACTCCGgggagaagccgttcagttgcgatctttgcgattataaatgcagaCAATCCGGGAATATGAAGAAGCACAGGCTAACGCATTCCGACGAAAAACCcttcagttgtgatctctgcgattataaatgtcgacagtcCGGAGATATGAAAGAGCACAAGCtgaaacacaccgacgagaagccattcagttgtgatctttgcgagcATCAATGGCCCCCCGTGCTTAAAAAAACATTCGAATGCGACAAATGCGATTCTAAATTTACATCTCGAGCGCAACTGCGCAAACATGTCCTCGTACACACCGACGAAAAGCCGTTCGCttgcgacctttgcgattacaaatgtcgcCTGGGTAAATACCTGAAACGGCACAGGTTgaagcacaccggcgagaagccgttcagctgtgatctttgcgattataaatgccgacaatcCGGAAACATGAAGCTGCACGTGTTAATACACACCgccgagaagccgttcggctgtgatctctgcgattataaatgtcgccAGGCGGGAACCTTGAAAGTGCACAAGCTGAAGCACgccaacgagaagccgttcggatGCGATTCctgcgattataagtgtcgaTATCAGAGAAACTTGAAGAGGCACAAGATGATGCACACCGACTTGAAGCCGTTCCGctgcgacctctgcgattataaatttcGAGAGGCCAGGCATCTGAAAGAGCACATgctaacgcacaccggcgagaagcccttGAGTTGCGATctatgcgattataaatgtcgataCCACGGGAACTTGAAAAAGCACAGgttaatacacaccgacgagaagccatACGGTTGCGATCTCTGCGAGTATAAGTGCCGACAGGTCGGCAGCTTGAAGAAACACAAGTTGAAACATGCCGACGATGAACCGTTCCGTTGCGATCGCTGCAATTATAAATGCCGAGAGGTCAGGAACCTGAAAAGACATCAATtgaaacacaccgacgagaagccgttcagatGTGGTCTTTGCGATTACATATGCGAAAGTTACGGAGATTTGGAAATACACGCGTTGGTACACAATGGCTAG
Protein Sequence
MKKHKLIHSDEKPFGCDLCEFNCRHLEGLRRHKLKHSDEKPFSCDLCDFKCQHLGSFKRHQLTHTDEKPFSCDLCDYKCRQSGNMKTHKLKHADEKQFACDLCDFRCRIPETLKQHKYKHIDLKLYSCDLCYFKSRRPSSLKRHRLTHNDDRPFSCDLCEYKCRLAAYLKRHKLRHTDEKPFACDVCDFKCRDVGSLKLHKLKHTGGKPLGCDLCDVRFRYPRSLKRHKLKLHTDEKPFGCELCDFRCRKLGSLEGHKVKHTVEKLFLCGRCGCLAQTVNETTPTCRICDTEFASLRYLRSHILTHTGEKPLACDICDYKCRYAGELKRHKLKHSDEKPFGCDLCDYRCRHVVALKRHKLIHTGEQPYSCDLCEYKCRLGTTLKRHKLRHTNEKPFSCDHCDFRCREFGNLKQHKLTHTQEKPFSCDQCDYKCRLSVTLKQHRLTHTGETPYSCNLCDYKCRQLSNLKQHELNHTGRKPFSCDRCEYKCRFAVNLKYHKLKHTGEAPFACDRCDYRCRIACSLKQHMLRHTDEKPFGCHLCDYRCFQLTPIIEATRKGILVSKLFTPDHKHVSPPHTGEMQFTCDFCAYKCRHFGNMKKHRLTHSDEKPFACDLCGYKCRQSGNMKKHKLKHTDEKPFGCDLCDYKCRQAGDIKTHRLTHSDEKPFGCDLCDYKCRQSGNMKKHKLTHSGEKPFSCDLCDYKCRQSGNMKKHRLTHSDEKPFSCDLCDYKCRQSGDMKEHKLKHTDEKPFSCDLCEHQWPPVLKKTFECDKCDSKFTSRAQLRKHVLVHTDEKPFACDLCDYKCRLGKYLKRHRLKHTGEKPFSCDLCDYKCRQSGNMKLHVLIHTAEKPFGCDLCDYKCRQAGTLKVHKLKHANEKPFGCDSCDYKCRYQRNLKRHKMMHTDLKPFRCDLCDYKFREARHLKEHMLTHTGEKPLSCDLCDYKCRYHGNLKKHRLIHTDEKPYGCDLCEYKCRQVGSLKKHKLKHADDEPFRCDRCNYKCREVRNLKRHQLKHTDEKPFRCGLCDYICESYGDLEIHALVHNG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01258845;
90% Identity
iTF_01258845;
80% Identity
iTF_01258845;