Basic Information

Insect: Prosopocoilus inquinatus
Gene Symbol: -
Assembly: GCA_036172665.1
Location: CM069876.1:47234779-47242290[+]

Transcription Factor Domain

TF Family: zf-GAGA
Domain: zf-GAGA domain
PFAM: PF09237
TF Group: Zinc-Coordinating Group
Description: Members of this family bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 28 0.051 30 5.8 0.1 8 44 57 93 54 103 0.77

2 28 7.6 4.5e+03 -1.2 0.1 23 44 100 121 90 126 0.88

3 28 2.3 1.4e+03 0.5 0.1 21 44 126 149 117 153 0.84

4 28 0.0012 0.71 11.0 0.1 19 43 180 204 172 213 0.86

5 28 1.3 7.7e+02 1.3 0.1 23 44 212 233 205 238 0.89

6 28 0.041 25 6.1 0.3 21 44 238 261 234 270 0.86

7 28 0.18 1.1e+02 4.0 0.0 21 44 322 345 313 350 0.81

8 28 4.1 2.4e+03 -0.3 0.1 26 44 353 371 346 373 0.88

9 28 0.17 1e+02 4.1 0.0 16 44 425 453 419 462 0.82

10 28 6.2 3.7e+03 -0.9 0.0 21 45 458 482 454 485 0.88

11 28 0.011 6.7 7.9 0.1 22 46 487 510 481 515 0.88

12 28 0.035 21 6.3 0.1 11 45 532 566 527 569 0.87

13 28 0.018 11 7.2 0.1 21 49 570 597 566 602 0.85

14 28 0.011 6.6 7.9 0.0 19 44 623 648 617 657 0.86

15 28 1.1 6.7e+02 1.5 0.1 23 44 655 676 648 680 0.85

16 28 0.98 5.8e+02 1.7 0.4 21 44 681 704 677 713 0.80

17 28 7.3 4.3e+03 -1.1 0.0 21 44 709 732 706 739 0.84

18 28 0.28 1.7e+02 3.4 0.0 21 44 765 788 757 793 0.80

19 28 5.2 3.1e+03 -0.7 0.1 26 44 796 814 789 815 0.88

20 28 0.15 90 4.3 0.8 15 45 867 897 858 906 0.79

21 28 7 4.1e+03 -1.1 0.0 23 45 903 925 899 929 0.88

22 28 0.079 47 5.2 0.1 21 44 929 952 921 958 0.85

23 28 0.056 33 5.6 0.1 10 45 974 1009 969 1013 0.89

24 28 0.12 73 4.6 0.1 21 46 1013 1037 1009 1042 0.87

25 28 0.011 6.7 7.9 0.0 19 44 1067 1092 1061 1102 0.86

26 28 2.4 1.4e+03 0.4 0.1 23 44 1099 1120 1092 1125 0.85

27 28 0.24 1.4e+02 3.6 0.8 21 44 1125 1148 1122 1157 0.86

28 28 0.31 1.9e+02 3.3 0.0 21 44 1209 1232 1201 1237 0.81

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	28	0.051	30	5.8	0.1	8	44	57	93	54	103	0.77
2	28	7.6	4.5e+03	-1.2	0.1	23	44	100	121	90	126	0.88
3	28	2.3	1.4e+03	0.5	0.1	21	44	126	149	117	153	0.84
4	28	0.0012	0.71	11.0	0.1	19	43	180	204	172	213	0.86
5	28	1.3	7.7e+02	1.3	0.1	23	44	212	233	205	238	0.89
6	28	0.041	25	6.1	0.3	21	44	238	261	234	270	0.86
7	28	0.18	1.1e+02	4.0	0.0	21	44	322	345	313	350	0.81
8	28	4.1	2.4e+03	-0.3	0.1	26	44	353	371	346	373	0.88
9	28	0.17	1e+02	4.1	0.0	16	44	425	453	419	462	0.82
10	28	6.2	3.7e+03	-0.9	0.0	21	45	458	482	454	485	0.88
11	28	0.011	6.7	7.9	0.1	22	46	487	510	481	515	0.88
12	28	0.035	21	6.3	0.1	11	45	532	566	527	569	0.87
13	28	0.018	11	7.2	0.1	21	49	570	597	566	602	0.85
14	28	0.011	6.6	7.9	0.0	19	44	623	648	617	657	0.86
15	28	1.1	6.7e+02	1.5	0.1	23	44	655	676	648	680	0.85
16	28	0.98	5.8e+02	1.7	0.4	21	44	681	704	677	713	0.80
17	28	7.3	4.3e+03	-1.1	0.0	21	44	709	732	706	739	0.84
18	28	0.28	1.7e+02	3.4	0.0	21	44	765	788	757	793	0.80
19	28	5.2	3.1e+03	-0.7	0.1	26	44	796	814	789	815	0.88
20	28	0.15	90	4.3	0.8	15	45	867	897	858	906	0.79
21	28	7	4.1e+03	-1.1	0.0	23	45	903	925	899	929	0.88
22	28	0.079	47	5.2	0.1	21	44	929	952	921	958	0.85
23	28	0.056	33	5.6	0.1	10	45	974	1009	969	1013	0.89
24	28	0.12	73	4.6	0.1	21	46	1013	1037	1009	1042	0.87
25	28	0.011	6.7	7.9	0.0	19	44	1067	1092	1061	1102	0.86
26	28	2.4	1.4e+03	0.4	0.1	23	44	1099	1120	1092	1125	0.85
27	28	0.24	1.4e+02	3.6	0.8	21	44	1125	1148	1122	1157	0.86
28	28	0.31	1.9e+02	3.3	0.0	21	44	1209	1232	1201	1237	0.81

Sequence Information

Coding Sequence: atggtGTTAATTACTAGCGGCCCAGCAGGCGGCGACGTAGACAAatgcCCTGAAAATCCTGATTCTACAATTTCGAAGATAGAAACACTAGAACGCGTCGATTTTGAACCTCTTGGGTGCAAACCATTAGGTGAAGGGATGAAACAATTGGTTTGGGATAACACGAGCCAACCAATCGGAAGCACTGAGCACAGGAAGACCAGTTCCAACGAGAAGTCCGTTACCTGTGAGATTTGCGGTTACAAATTCTCGTTTCGCGGACATCTGAACAGACACATGTTGACCCACACCGACATAAAACCGTTCGTATGCGAACACTGCGGTCACAAGTGCAGAAGCTCCTCGGATTTGAAACAACACATGCGAAAACATACCGGCGAGATGCCGTACTCATGCAAAATTTGCGGTTACAAAAGCCGGCACGCCGCGAGCTTGCAACAGCACATGTTCAAGCACACCGACGACAAGCAGTTCATTTGCGATCGTTGCGGTTACAAGTGTTACGCAGACGCAGTCTTGAAGCGGCACATGCGGAAGCACACCAGCGATAAACCGTTCGCTTGCGACCTGTGCTCCCAAAAATTTAGGCACTCCGAAAATTTGAAAAGGCACAGGCTCTCGCACACCGGCGTGAAGCCGTTCGCTTGCGAAGTTTGCCATCAGAAATTTCCACGCTTAGAGAATCTGCAGCGCCACATGTTAACGCATAGCGACGAGAAGCCGCACAAGTGCGCCCTGTGCGATTATAGATGCAAGCAGTCCTCGCTTTTGAAGCGACACATgttgacgcacaccggcgagaaaccctTCAAATGCAATCTCTGCGCTTACGAAGGTACCGTGGCTGGAAACTTAAGGATGCACATGTTGACGCACACCGACCAGAAGTCGTTTAAGTGCGAGCGCTGCGAATACGTATGCAAGACGGCCAGATATTTAAAGTTGCACATGCGAGTGCACTCGGATGAGAAGCCGTTTAAATGCGACCTTTGCGAATATGCGGCGAAGTTTCAAGGCAACTTACGAAAACATATGACGACTCACGAGACTCTCCTCAAGTGCAACATTTGCGAATATTCGTGCAAGTTGGCCAAGGATTTAAGGAAGCATGTaCGCTCTGGAAACCCTGGATCAACAAATTCGAAGATAAAAACGCTGGAGCACGTCGATTTTGAAGCTCTTGGACGGAAACCTGATGACAAACTGTTAGGTGAAGCGACGAAGCCGTTCGTTCGGGATAACACGAGCCAAACAATCGAAAGCACCGAGCACAGGAAGACCAGTTCCAACGAGAAGTCCGTCACCTGTGGGATTTGTGATCGTAAATACTTGTATGGCGCAAGTCTGAAAAGACACATGTTGAACCACACCGACGAAAAACCGTTCGCTTGCGAGCAATGCAATTACAAATGCAGAAAGGCGTGGGATTTGAAACTACACATGCgaatacacaccgacgagatgCCTTACTGCTGTAAAACATGCGACTACAAAACTCGACAATCCGGAAACTTGAAAAAGCACATGTTGAAGCACACCGACGACAAGAAGTTTatttgcgatctttgcgattacaaatgttaCACAGAACCAGCCTTGAAGAAGCACAAGCTAAagcacaccaacgagaagccgttcacttGCGAACATTGCGGACACAAATGCAGAACCATCTGGAATTTGAAACAGCACCTGCGACAACACACCGACGAGATGCCTTACTGCTGTAAAACATGCGATTACAAAACTCGACAATCCGGAAACTTGAAGATGCACATGTTGAAGCACACCGACAAGAAGTTTGTTTGCGATCGTTGCGGATACAAATCCTACTCGGAAGAATCCTTGAAGCAGCACATGCGGAAGCACACcagcgagaaaccgttcggatGCGACCTGTGCCCCCAAAAATTTAAGCATCCTGAAAATTTGAGAAGGCACAAGCGCTCGCACGCCGGCgtgaagccgttcggttgtgaagTTTGCCATCAGAAATTTCCACGTTCAGAAACTTTGCAGCGCCACATGTTAACGCATAGCGACGAGAAGCCGCACAAGTGTGctctgtgcgattataaatgcaagCGGCAGTCGCAGTTGAAGCAACACATATTgacacacaccggcgagaaaccctTCAAATGCAAACTCTGCGCTTACGAAGGTACCTCAGCTGGAAACTTAAGGATGCACATGTTGACGCATACCGACCAGAAGTCGTTTAAGTGCGAGCGCTGCGAATACGTATGCAAGTCAGCCAGATATTTGAAGTTGCACATGCGAGTACACTCGGACGAGAAGCCGTTTAAATGCGACCTTTGCGAATACGCGAGCAAGTTTCAAGGCAACTTACGGAAACACATGACGACTCACGAAACTCTCCTCAAGTGCAATATTTGCGAGTATTCGTGCAAGTTGGCCAAGGATTTAAGGAAGCATGTatgcTCTGGAAACTCTGGATCAACAATTTCGAAGATAAAAACGCTGAAACACGTCGATTTTGAAGGTCTTGGACGCAAACCTAATGACATACTGTTAGGTGAAGCGACGAAGCAGTTCGTTCGGGATAACACGAGCCAACCAATCGAAAGCAGCGAGCACAGGAAGACCAGTTCCATCGAGAAGTCCGTCACCTGTGGGATTTGTGCTTGTAAATATTCGTGTCGCGCAAGTCTGAAAAGACACATGCTGACCCACACCGACGTAAAACCGTTCGCTTGCGAACAATGCAATTACAAATGCAGAAAGGCCTGGGATTTGAAACAGCACTTGCggaaacacaccggcgagatgcctttctgttgtaaaatttgcGGTTTCCAAACCCGACAATCCGGAAGCTTAAAATATCACACGTTGAAGCACACCGACGACAAACAGTTTACTTGCGATCATTGCGGTTACAAATGTTACACAGAACCAGCCTTGAAGAAGCACAAGCAAAAGCACACCAGCGAGAAGGCGTTCACTTGCGAACATTGCGGACACAAATCCAGAAACATCTGGAATTTGAAACAACACCTGCgaaaacacaccgacgagatGCCTTACTGCTGTAAAACATGCGATTACAAAACTCGACAATCCGGAAGCTTGAAAAAGCACATGTTGAAGCACACCGACGACAAGAAGTTTATTTGCGATCGTTGCGGTTACAAATCCTACTCGGAAGAATCCTTGAAGATGCACATGCGGAAGCACACcagcgagaaaccgttcggatGCGACCTGTGCCCCCAAAAATTTAGGCATCCCGAAAATTTGAAAAGGCACAAGCGCTCGCACGCTGGCgtgaagccgttcggttgtgaagTTTGCAATCAGAAATTTCCACGTTCAGAAACTTTGCAGCGCCACATGTTAACGCATAGCGACGAGAGGCCGCACAAGTGTGCCCTGTGCGACTATAAATGCAAGCagcggacgcagttgaagcgaCACATATTgacacacaccggcgagaaaccctTCAAATGCAAACTCTGCGCTTACGAAGGTACCTTAGCTGGAAACTTAAGGATGCACATGTTGACGCACACCGACCAGAAGTCGTTTAAATGCGATCGCTGTGAATACGTATGCAAGTCGGCCAGATATTTGAAGTTGCACATGCGAGTGCACTCGGATGAGAAGCCGTTTAAATGCGACTTTTGCGAATACGCGACCAAGTTTCAAGGCAACTTACGGAAACACATGACGACTCACGAAACTCTCCTCAAGTGCAACATTTGTGAATATTCGTGCAAGTTGGCCAAGGATTTAGGAAAGCACGTGTCGACACACTCAAACGACAATGCGCCTTGA
Protein Sequence: MVLITSGPAGGDVDKCPENPDSTISKIETLERVDFEPLGCKPLGEGMKQLVWDNTSQPIGSTEHRKTSSNEKSVTCEICGYKFSFRGHLNRHMLTHTDIKPFVCEHCGHKCRSSSDLKQHMRKHTGEMPYSCKICGYKSRHAASLQQHMFKHTDDKQFICDRCGYKCYADAVLKRHMRKHTSDKPFACDLCSQKFRHSENLKRHRLSHTGVKPFACEVCHQKFPRLENLQRHMLTHSDEKPHKCALCDYRCKQSSLLKRHMLTHTGEKPFKCNLCAYEGTVAGNLRMHMLTHTDQKSFKCERCEYVCKTARYLKLHMRVHSDEKPFKCDLCEYAAKFQGNLRKHMTTHETLLKCNICEYSCKLAKDLRKHVRSGNPGSTNSKIKTLEHVDFEALGRKPDDKLLGEATKPFVRDNTSQTIESTEHRKTSSNEKSVTCGICDRKYLYGASLKRHMLNHTDEKPFACEQCNYKCRKAWDLKLHMRIHTDEMPYCCKTCDYKTRQSGNLKKHMLKHTDDKKFICDLCDYKCYTEPALKKHKLKHTNEKPFTCEHCGHKCRTIWNLKQHLRQHTDEMPYCCKTCDYKTRQSGNLKMHMLKHTDKKFVCDRCGYKSYSEESLKQHMRKHTSEKPFGCDLCPQKFKHPENLRRHKRSHAGVKPFGCEVCHQKFPRSETLQRHMLTHSDEKPHKCALCDYKCKRQSQLKQHILTHTGEKPFKCKLCAYEGTSAGNLRMHMLTHTDQKSFKCERCEYVCKSARYLKLHMRVHSDEKPFKCDLCEYASKFQGNLRKHMTTHETLLKCNICEYSCKLAKDLRKHVCSGNSGSTISKIKTLKHVDFEGLGRKPNDILLGEATKQFVRDNTSQPIESSEHRKTSSIEKSVTCGICACKYSCRASLKRHMLTHTDVKPFACEQCNYKCRKAWDLKQHLRKHTGEMPFCCKICGFQTRQSGSLKYHTLKHTDDKQFTCDHCGYKCYTEPALKKHKQKHTSEKAFTCEHCGHKSRNIWNLKQHLRKHTDEMPYCCKTCDYKTRQSGSLKKHMLKHTDDKKFICDRCGYKSYSEESLKMHMRKHTSEKPFGCDLCPQKFRHPENLKRHKRSHAGVKPFGCEVCNQKFPRSETLQRHMLTHSDERPHKCALCDYKCKQRTQLKRHILTHTGEKPFKCKLCAYEGTLAGNLRMHMLTHTDQKSFKCDRCEYVCKSARYLKLHMRVHSDEKPFKCDFCEYATKFQGNLRKHMTTHETLLKCNICEYSCKLAKDLGKHVSTHSNDNAP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01258265;
90% Identity: iTF_01258265;
80% Identity: iTF_01258265;