Pinq024247.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Prosopocoilus inquinatus
Gene Symbol
-
Assembly
GCA_036172665.1
Location
CM069876.1:47234779-47242290[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 39 1.8e-06 0.00011 23.4 1.7 2 23 75 96 74 96 0.97
2 39 6e-05 0.0038 18.5 7.9 1 23 102 124 102 124 0.98
3 39 0.00023 0.014 16.7 2.6 1 23 130 152 130 152 0.98
4 39 0.061 3.8 9.1 2.0 1 23 158 180 158 180 0.97
5 39 0.00016 0.0098 17.2 3.5 1 23 186 208 186 208 0.97
6 39 3.3e-06 0.00021 22.5 1.3 1 23 214 236 214 236 0.97
7 39 0.00018 0.011 17.1 5.7 1 23 242 264 242 264 0.98
8 39 0.0097 0.6 11.6 0.1 1 23 270 292 270 292 0.99
9 39 0.00033 0.021 16.2 3.4 1 23 298 320 298 320 0.99
10 39 0.00034 0.021 16.2 0.9 1 23 326 348 326 348 0.99
11 39 0.0078 0.49 11.9 1.3 2 21 353 372 352 373 0.94
12 39 0.079 5 8.7 0.2 2 23 435 456 434 456 0.96
13 39 0.00056 0.035 15.5 1.9 1 23 462 484 462 484 0.97
14 39 0.00026 0.016 16.5 5.5 1 23 490 512 490 512 0.98
15 39 0.028 1.7 10.2 2.4 1 23 518 540 518 540 0.97
16 39 0.0039 0.24 12.9 7.4 1 23 546 568 546 568 0.98
17 39 0.00075 0.047 15.1 4.8 1 23 574 596 574 596 0.98
18 39 0.00031 0.019 16.3 1.4 1 23 601 623 601 623 0.98
19 39 6.4e-05 0.004 18.5 2.5 3 23 631 651 629 651 0.98
20 39 2.8e-05 0.0018 19.6 1.7 3 23 659 679 657 679 0.98
21 39 0.00032 0.02 16.3 5.9 1 23 685 707 685 707 0.98
22 39 0.0019 0.12 13.9 0.2 1 23 713 735 713 735 0.99
23 39 0.00043 0.027 15.9 3.2 1 23 741 763 741 763 0.99
24 39 0.00017 0.011 17.1 1.5 1 23 769 791 769 791 0.99
25 39 0.08 5 8.7 3.0 2 21 796 815 795 816 0.93
26 39 0.38 24 6.6 3.6 2 23 878 899 877 899 0.96
27 39 0.0018 0.11 13.9 3.1 1 23 905 927 905 927 0.97
28 39 0.02 1.3 10.6 4.2 1 23 933 955 933 955 0.97
29 39 0.0096 0.6 11.6 5.8 1 23 961 983 961 983 0.98
30 39 0.0013 0.083 14.3 5.1 1 23 989 1011 989 1011 0.99
31 39 0.00075 0.047 15.1 5.5 1 23 1017 1039 1017 1039 0.98
32 39 0.001 0.065 14.7 1.2 1 23 1045 1067 1045 1067 0.97
33 39 6.1e-05 0.0038 18.5 2.5 3 23 1075 1095 1073 1095 0.98
34 39 1.4e-05 0.00089 20.5 0.6 3 23 1103 1123 1101 1123 0.98
35 39 0.0014 0.085 14.3 6.4 1 23 1129 1151 1129 1151 0.98
36 39 0.019 1.2 10.7 0.2 1 23 1157 1179 1157 1179 0.99
37 39 0.00044 0.028 15.8 3.2 1 23 1185 1207 1185 1207 0.99
38 39 0.00021 0.013 16.9 2.3 1 23 1213 1235 1213 1235 0.99
39 39 0.021 1.3 10.5 1.4 2 23 1240 1261 1239 1261 0.97

Sequence Information

Coding Sequence
atggtGTTAATTACTAGCGGCCCAGCAGGCGGCGACGTAGACAAatgcCCTGAAAATCCTGATTCTACAATTTCGAAGATAGAAACACTAGAACGCGTCGATTTTGAACCTCTTGGGTGCAAACCATTAGGTGAAGGGATGAAACAATTGGTTTGGGATAACACGAGCCAACCAATCGGAAGCACTGAGCACAGGAAGACCAGTTCCAACGAGAAGTCCGTTACCTGTGAGATTTGCGGTTACAAATTCTCGTTTCGCGGACATCTGAACAGACACATGTTGACCCACACCGACATAAAACCGTTCGTATGCGAACACTGCGGTCACAAGTGCAGAAGCTCCTCGGATTTGAAACAACACATGCGAAAACATACCGGCGAGATGCCGTACTCATGCAAAATTTGCGGTTACAAAAGCCGGCACGCCGCGAGCTTGCAACAGCACATGTTCAAGCACACCGACGACAAGCAGTTCATTTGCGATCGTTGCGGTTACAAGTGTTACGCAGACGCAGTCTTGAAGCGGCACATGCGGAAGCACACCAGCGATAAACCGTTCGCTTGCGACCTGTGCTCCCAAAAATTTAGGCACTCCGAAAATTTGAAAAGGCACAGGCTCTCGCACACCGGCGTGAAGCCGTTCGCTTGCGAAGTTTGCCATCAGAAATTTCCACGCTTAGAGAATCTGCAGCGCCACATGTTAACGCATAGCGACGAGAAGCCGCACAAGTGCGCCCTGTGCGATTATAGATGCAAGCAGTCCTCGCTTTTGAAGCGACACATgttgacgcacaccggcgagaaaccctTCAAATGCAATCTCTGCGCTTACGAAGGTACCGTGGCTGGAAACTTAAGGATGCACATGTTGACGCACACCGACCAGAAGTCGTTTAAGTGCGAGCGCTGCGAATACGTATGCAAGACGGCCAGATATTTAAAGTTGCACATGCGAGTGCACTCGGATGAGAAGCCGTTTAAATGCGACCTTTGCGAATATGCGGCGAAGTTTCAAGGCAACTTACGAAAACATATGACGACTCACGAGACTCTCCTCAAGTGCAACATTTGCGAATATTCGTGCAAGTTGGCCAAGGATTTAAGGAAGCATGTaCGCTCTGGAAACCCTGGATCAACAAATTCGAAGATAAAAACGCTGGAGCACGTCGATTTTGAAGCTCTTGGACGGAAACCTGATGACAAACTGTTAGGTGAAGCGACGAAGCCGTTCGTTCGGGATAACACGAGCCAAACAATCGAAAGCACCGAGCACAGGAAGACCAGTTCCAACGAGAAGTCCGTCACCTGTGGGATTTGTGATCGTAAATACTTGTATGGCGCAAGTCTGAAAAGACACATGTTGAACCACACCGACGAAAAACCGTTCGCTTGCGAGCAATGCAATTACAAATGCAGAAAGGCGTGGGATTTGAAACTACACATGCgaatacacaccgacgagatgCCTTACTGCTGTAAAACATGCGACTACAAAACTCGACAATCCGGAAACTTGAAAAAGCACATGTTGAAGCACACCGACGACAAGAAGTTTatttgcgatctttgcgattacaaatgttaCACAGAACCAGCCTTGAAGAAGCACAAGCTAAagcacaccaacgagaagccgttcacttGCGAACATTGCGGACACAAATGCAGAACCATCTGGAATTTGAAACAGCACCTGCGACAACACACCGACGAGATGCCTTACTGCTGTAAAACATGCGATTACAAAACTCGACAATCCGGAAACTTGAAGATGCACATGTTGAAGCACACCGACAAGAAGTTTGTTTGCGATCGTTGCGGATACAAATCCTACTCGGAAGAATCCTTGAAGCAGCACATGCGGAAGCACACcagcgagaaaccgttcggatGCGACCTGTGCCCCCAAAAATTTAAGCATCCTGAAAATTTGAGAAGGCACAAGCGCTCGCACGCCGGCgtgaagccgttcggttgtgaagTTTGCCATCAGAAATTTCCACGTTCAGAAACTTTGCAGCGCCACATGTTAACGCATAGCGACGAGAAGCCGCACAAGTGTGctctgtgcgattataaatgcaagCGGCAGTCGCAGTTGAAGCAACACATATTgacacacaccggcgagaaaccctTCAAATGCAAACTCTGCGCTTACGAAGGTACCTCAGCTGGAAACTTAAGGATGCACATGTTGACGCATACCGACCAGAAGTCGTTTAAGTGCGAGCGCTGCGAATACGTATGCAAGTCAGCCAGATATTTGAAGTTGCACATGCGAGTACACTCGGACGAGAAGCCGTTTAAATGCGACCTTTGCGAATACGCGAGCAAGTTTCAAGGCAACTTACGGAAACACATGACGACTCACGAAACTCTCCTCAAGTGCAATATTTGCGAGTATTCGTGCAAGTTGGCCAAGGATTTAAGGAAGCATGTatgcTCTGGAAACTCTGGATCAACAATTTCGAAGATAAAAACGCTGAAACACGTCGATTTTGAAGGTCTTGGACGCAAACCTAATGACATACTGTTAGGTGAAGCGACGAAGCAGTTCGTTCGGGATAACACGAGCCAACCAATCGAAAGCAGCGAGCACAGGAAGACCAGTTCCATCGAGAAGTCCGTCACCTGTGGGATTTGTGCTTGTAAATATTCGTGTCGCGCAAGTCTGAAAAGACACATGCTGACCCACACCGACGTAAAACCGTTCGCTTGCGAACAATGCAATTACAAATGCAGAAAGGCCTGGGATTTGAAACAGCACTTGCggaaacacaccggcgagatgcctttctgttgtaaaatttgcGGTTTCCAAACCCGACAATCCGGAAGCTTAAAATATCACACGTTGAAGCACACCGACGACAAACAGTTTACTTGCGATCATTGCGGTTACAAATGTTACACAGAACCAGCCTTGAAGAAGCACAAGCAAAAGCACACCAGCGAGAAGGCGTTCACTTGCGAACATTGCGGACACAAATCCAGAAACATCTGGAATTTGAAACAACACCTGCgaaaacacaccgacgagatGCCTTACTGCTGTAAAACATGCGATTACAAAACTCGACAATCCGGAAGCTTGAAAAAGCACATGTTGAAGCACACCGACGACAAGAAGTTTATTTGCGATCGTTGCGGTTACAAATCCTACTCGGAAGAATCCTTGAAGATGCACATGCGGAAGCACACcagcgagaaaccgttcggatGCGACCTGTGCCCCCAAAAATTTAGGCATCCCGAAAATTTGAAAAGGCACAAGCGCTCGCACGCTGGCgtgaagccgttcggttgtgaagTTTGCAATCAGAAATTTCCACGTTCAGAAACTTTGCAGCGCCACATGTTAACGCATAGCGACGAGAGGCCGCACAAGTGTGCCCTGTGCGACTATAAATGCAAGCagcggacgcagttgaagcgaCACATATTgacacacaccggcgagaaaccctTCAAATGCAAACTCTGCGCTTACGAAGGTACCTTAGCTGGAAACTTAAGGATGCACATGTTGACGCACACCGACCAGAAGTCGTTTAAATGCGATCGCTGTGAATACGTATGCAAGTCGGCCAGATATTTGAAGTTGCACATGCGAGTGCACTCGGATGAGAAGCCGTTTAAATGCGACTTTTGCGAATACGCGACCAAGTTTCAAGGCAACTTACGGAAACACATGACGACTCACGAAACTCTCCTCAAGTGCAACATTTGTGAATATTCGTGCAAGTTGGCCAAGGATTTAGGAAAGCACGTGTCGACACACTCAAACGACAATGCGCCTTGA
Protein Sequence
MVLITSGPAGGDVDKCPENPDSTISKIETLERVDFEPLGCKPLGEGMKQLVWDNTSQPIGSTEHRKTSSNEKSVTCEICGYKFSFRGHLNRHMLTHTDIKPFVCEHCGHKCRSSSDLKQHMRKHTGEMPYSCKICGYKSRHAASLQQHMFKHTDDKQFICDRCGYKCYADAVLKRHMRKHTSDKPFACDLCSQKFRHSENLKRHRLSHTGVKPFACEVCHQKFPRLENLQRHMLTHSDEKPHKCALCDYRCKQSSLLKRHMLTHTGEKPFKCNLCAYEGTVAGNLRMHMLTHTDQKSFKCERCEYVCKTARYLKLHMRVHSDEKPFKCDLCEYAAKFQGNLRKHMTTHETLLKCNICEYSCKLAKDLRKHVRSGNPGSTNSKIKTLEHVDFEALGRKPDDKLLGEATKPFVRDNTSQTIESTEHRKTSSNEKSVTCGICDRKYLYGASLKRHMLNHTDEKPFACEQCNYKCRKAWDLKLHMRIHTDEMPYCCKTCDYKTRQSGNLKKHMLKHTDDKKFICDLCDYKCYTEPALKKHKLKHTNEKPFTCEHCGHKCRTIWNLKQHLRQHTDEMPYCCKTCDYKTRQSGNLKMHMLKHTDKKFVCDRCGYKSYSEESLKQHMRKHTSEKPFGCDLCPQKFKHPENLRRHKRSHAGVKPFGCEVCHQKFPRSETLQRHMLTHSDEKPHKCALCDYKCKRQSQLKQHILTHTGEKPFKCKLCAYEGTSAGNLRMHMLTHTDQKSFKCERCEYVCKSARYLKLHMRVHSDEKPFKCDLCEYASKFQGNLRKHMTTHETLLKCNICEYSCKLAKDLRKHVCSGNSGSTISKIKTLKHVDFEGLGRKPNDILLGEATKQFVRDNTSQPIESSEHRKTSSIEKSVTCGICACKYSCRASLKRHMLTHTDVKPFACEQCNYKCRKAWDLKQHLRKHTGEMPFCCKICGFQTRQSGSLKYHTLKHTDDKQFTCDHCGYKCYTEPALKKHKQKHTSEKAFTCEHCGHKSRNIWNLKQHLRKHTDEMPYCCKTCDYKTRQSGSLKKHMLKHTDDKKFICDRCGYKSYSEESLKMHMRKHTSEKPFGCDLCPQKFRHPENLKRHKRSHAGVKPFGCEVCNQKFPRSETLQRHMLTHSDERPHKCALCDYKCKQRTQLKRHILTHTGEKPFKCKLCAYEGTLAGNLRMHMLTHTDQKSFKCDRCEYVCKSARYLKLHMRVHSDEKPFKCDFCEYATKFQGNLRKHMTTHETLLKCNICEYSCKLAKDLGKHVSTHSNDNAP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01258841;
90% Identity
iTF_01258841;
80% Identity
iTF_01258841;