Basic Information

Insect: Prosopocoilus inquinatus
Gene Symbol: -
Assembly: GCA_036172665.1
Location: CM069876.1:47394360-47397617[+]

Transcription Factor Domain

TF Family: zf-GAGA
Domain: zf-GAGA domain
PFAM: PF09237
TF Group: Zinc-Coordinating Group
Description: Members of this family bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 27 2.4 1.4e+03 0.4 0.1 26 45 19 38 12 47 0.81

2 27 8.6 5.1e+03 -1.3 0.0 21 43 42 64 38 73 0.81

3 27 4.5 2.7e+03 -0.5 0.0 20 48 69 96 53 101 0.81

4 27 2.4 1.4e+03 0.4 0.1 26 43 101 118 95 123 0.88

5 27 0.049 29 5.8 0.5 21 44 124 147 121 151 0.90

6 27 0.061 36 5.5 0.1 21 44 152 175 148 184 0.87

7 27 7.8 4.7e+03 -1.2 0.0 23 45 210 232 205 239 0.78

8 27 0.09 54 5.0 0.3 19 43 264 288 253 293 0.83

9 27 0.84 5e+02 1.9 0.0 21 44 294 317 292 326 0.84

10 27 0.011 6.7 7.9 0.1 20 44 349 373 338 383 0.86

11 27 6.8 4e+03 -1.0 0.0 20 44 377 401 372 409 0.77

12 27 0.52 3.1e+02 2.6 0.3 21 45 406 430 398 437 0.88

13 27 3.4 2e+03 -0.1 0.1 21 43 476 498 466 502 0.85

14 27 0.026 15 6.7 0.0 13 43 496 526 494 533 0.90

15 27 0.18 1.1e+02 4.0 0.0 21 44 532 555 527 560 0.90

16 27 0.24 1.4e+02 3.6 0.1 21 46 560 585 557 593 0.81

17 27 5.1 3e+03 -0.6 0.0 21 43 588 610 585 616 0.85

18 27 0.83 4.9e+02 1.9 0.1 22 48 617 642 608 644 0.79

19 27 0.025 15 6.8 0.0 16 44 639 667 630 676 0.86

20 27 3.5 2e+03 -0.1 0.0 21 43 672 694 669 700 0.81

21 27 0.02 12 7.1 0.0 21 46 700 725 681 728 0.91

22 27 0.00014 0.082 14.0 0.1 21 49 728 756 725 759 0.87

23 27 0.03 18 6.5 0.0 21 44 756 779 753 783 0.90

24 27 0.098 58 4.9 0.1 21 44 784 807 781 815 0.86

25 27 1.6 9.4e+02 1.0 0.0 20 43 811 834 804 840 0.83

26 27 0.0098 5.8 8.1 0.0 21 43 840 862 837 870 0.90

27 27 1.9 1.1e+03 0.8 0.0 13 43 860 890 860 897 0.81

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	27	2.4	1.4e+03	0.4	0.1	26	45	19	38	12	47	0.81
2	27	8.6	5.1e+03	-1.3	0.0	21	43	42	64	38	73	0.81
3	27	4.5	2.7e+03	-0.5	0.0	20	48	69	96	53	101	0.81
4	27	2.4	1.4e+03	0.4	0.1	26	43	101	118	95	123	0.88
5	27	0.049	29	5.8	0.5	21	44	124	147	121	151	0.90
6	27	0.061	36	5.5	0.1	21	44	152	175	148	184	0.87
7	27	7.8	4.7e+03	-1.2	0.0	23	45	210	232	205	239	0.78
8	27	0.09	54	5.0	0.3	19	43	264	288	253	293	0.83
9	27	0.84	5e+02	1.9	0.0	21	44	294	317	292	326	0.84
10	27	0.011	6.7	7.9	0.1	20	44	349	373	338	383	0.86
11	27	6.8	4e+03	-1.0	0.0	20	44	377	401	372	409	0.77
12	27	0.52	3.1e+02	2.6	0.3	21	45	406	430	398	437	0.88
13	27	3.4	2e+03	-0.1	0.1	21	43	476	498	466	502	0.85
14	27	0.026	15	6.7	0.0	13	43	496	526	494	533	0.90
15	27	0.18	1.1e+02	4.0	0.0	21	44	532	555	527	560	0.90
16	27	0.24	1.4e+02	3.6	0.1	21	46	560	585	557	593	0.81
17	27	5.1	3e+03	-0.6	0.0	21	43	588	610	585	616	0.85
18	27	0.83	4.9e+02	1.9	0.1	22	48	617	642	608	644	0.79
19	27	0.025	15	6.8	0.0	16	44	639	667	630	676	0.86
20	27	3.5	2e+03	-0.1	0.0	21	43	672	694	669	700	0.81
21	27	0.02	12	7.1	0.0	21	46	700	725	681	728	0.91
22	27	0.00014	0.082	14.0	0.1	21	49	728	756	725	759	0.87
23	27	0.03	18	6.5	0.0	21	44	756	779	753	783	0.90
24	27	0.098	58	4.9	0.1	21	44	784	807	781	815	0.86
25	27	1.6	9.4e+02	1.0	0.0	20	43	811	834	804	840	0.83
26	27	0.0098	5.8	8.1	0.0	21	43	840	862	837	870	0.90
27	27	1.9	1.1e+03	0.8	0.0	13	43	860	890	860	897	0.81

Sequence Information

Coding Sequence: ATGTTCAGCAACTTGAAGAAGCACaagttaatacacaccggcgaaaaaCTCTTCCGTTGTAACATTTGCGATTACAGATGCGAAGAGGTGGGAAATTTGAAAAGGCACATGTACAcccacaccggcgagaagcctttCAGTTGCGACCTCTGCGACTACAAGAGCACACACTTCGCAAATCTGAAGAAGCACCAgctaacgcacaccggcgagaatcCTTTCGGTTGTACTttctgcgattataagtgcaaAGATTTCGGGAAATTGAAAAGGCACGTCTTAACGCACACCGCCGAGAAAAGTTGTAacatttgcgattataaatgcaagGATGTTGGAAACTTGAAAAGGCACAACCTAATCCACACGGGCgaaaagccgttcagttgcgatgtTTGCGATTACAGGTGCCGACAGAGCTCTAGCTTGAAGTGCCACATGTTAACACACACCGGTGAAAACCCTTTCAGTTGTAATGTTTGCAATTATAAATGCAGAGGGGTTGGAAATTTGAAGAGGCATAAGCTGACGCACagcggcgagaagccgttcagttgtaatctctgcgattacaaatgcgcACAGTTCGGACATTTGAAAACGCACAAGCTGACACACACCGACGGGGAGCCGCAGAGTTGTAAAATTTGCGGTTATCAAACCGGAAATGCTAAAAGCTTCAATCGACATATGCGAGCACACATCGGCGAAAAGCCGTTCACTGGCAATGATACTTGCGTTTGTAAATGTGAAGAGATGGGAAATTCGAAAAGACGCAAGTCAATCCACGCCGCCGACGAAAAGCCTTCCAGGTGTAACATTTGCGATTATAGATGCAAAGGCATCGGAAATTTGAAGAGGCACAAGCTGACACACACGGGCGAGAAGCCATACGGTTGTAATCTTTGCGAATATAAATGCACACAGTTCGGAAATTTAAAGAAGCACAAGTTGACACACACCAGCGTGAAGCCGCTCTGTTGTAATACTTGCGGTTATCAAACCGGAAGCACTAGTGGTTTAAGTCGGCATATGCGAGCACACGTAAGCGAAAAGCCGTTGAGTTGTGGTATTTGCGAGTACAAAACTCGACAcaatgaaaatttgaagaatCACAGGCGAAcacataccggcgagaaaccgttcggctgCGACCTTTGCGAATATAAATGCGCGTTCCGGGGAAATTTGCAAAAGCACATGCTAACGCACACGGGCGAGAAGCCGTACAGTTGTAATGCTTGCGATTATCAGACTCGACAGCGCGGTAATTTGAACCTGCATATATGCCCACGGATTGTCAAGCCTGTAACCAAGAAAACGTACAAACAGAGCACAAGCGGCAAGAAAACGTTCGGTTGTGAAATTTGGAATTACAAAAGCACAGATTTAGGAAATCTGAGAAAGCACATGTTagcacacaccgacgagaagccgttcagttgtaacctttgcgattacaaaagcTCACAGATCAGATATTTGGAGAAGCACAAGATAAAACACACTAGCGAGAAGCCTTTcggttgcgatctttgcgaatTCAAATGCCGCCGGAGCGGTGAGTTGAAGAATCACAAgttaacacacaccggcgagaggcccttcagttgtgatctttgtggTTACGAATGCCGACGCAGCGACGATTTGAAGAAACACATgttaacacacaccggcgagaagccgttcacttGCAGAATTTGCGATTACCGAGCTCGAGACAAGGGAGTTTTGAAAACTCACATTCtcatacacaccggcgagaagcctttcagttgtgatctttgcgattacaaatgccgatcaaccgtttatttaaagaaacacAAGTTAACTCACACCGGTGAGAAGCAGTACAGCTGTGATATTTGCGATTACAAGAGCCTGCACTTCGAAAATTTGAGAAGGCACAAGGTGAGACACACCAGCGAGAAGCctttcggttgtgatctttgtgaTTACAAGTTCCGACGAAACGTGGAGTTGAAGAAACACATGTTAACGCACACCGGTGAGAAACCGCTCAGCTGTGATATTTGCGGTAAAAGATTCCTGCATAGCGGAAGTTTAAAATACCACGTGCtaacacacaccggcgagaagccgttcacttGCAATGTCTGCGGTTACCAAGCCCGAGAGAGTGGAGTCTTGAAGAAGCATATGCGAATgcacaccggcgaaaagccgGTCAGTTGTGATATTTGCGATAAGAAATTTCGACgcagagaaaatttgaaacgtcacTTGcgaatacacaccggcgagaaaccgttcagttgtaatATTTGCGGTTACCAAAGCCAACAAAGCAAATATCTGAAAAAGCACGTGCTAATacacaccgatgagaagccgttcactTGCAATTTTTGCAGTTACGTGTGCCGAGACAAGGGAAGATTGAAGGAGCACGCGCgaaagcacaccgacgagaagccgttcagttgtgatctttgcgatttcaAATGCCGATATTCCGTAAGTCTGAAAGGCCACACGCTAATCCACACTGACGAGAagccgtttagttgtgatctttgtcGTTTCAAAACCagacagtccggaaatttggaGAAGCATAGGCTAACGCATACTGGCGAGAAgacgttcagttgtgatctttgcgattacaaatctATACGGCTCGGAAATTTGAAGAGGCACAAATTAATACATACCGGCGAGTTGCCATTTTTTTGTGGTGTTTGCAGCCGAGAATTCGGACAAATCACACTTTTGAAACAACACATGCGAGATCATGACATCCAGAAGCCATAA
Protein Sequence: MFSNLKKHKLIHTGEKLFRCNICDYRCEEVGNLKRHMYTHTGEKPFSCDLCDYKSTHFANLKKHQLTHTGENPFGCTFCDYKCKDFGKLKRHVLTHTAEKSCNICDYKCKDVGNLKRHNLIHTGEKPFSCDVCDYRCRQSSSLKCHMLTHTGENPFSCNVCNYKCRGVGNLKRHKLTHSGEKPFSCNLCDYKCAQFGHLKTHKLTHTDGEPQSCKICGYQTGNAKSFNRHMRAHIGEKPFTGNDTCVCKCEEMGNSKRRKSIHAADEKPSRCNICDYRCKGIGNLKRHKLTHTGEKPYGCNLCEYKCTQFGNLKKHKLTHTSVKPLCCNTCGYQTGSTSGLSRHMRAHVSEKPLSCGICEYKTRHNENLKNHRRTHTGEKPFGCDLCEYKCAFRGNLQKHMLTHTGEKPYSCNACDYQTRQRGNLNLHICPRIVKPVTKKTYKQSTSGKKTFGCEIWNYKSTDLGNLRKHMLAHTDEKPFSCNLCDYKSSQIRYLEKHKIKHTSEKPFGCDLCEFKCRRSGELKNHKLTHTGERPFSCDLCGYECRRSDDLKKHMLTHTGEKPFTCRICDYRARDKGVLKTHILIHTGEKPFSCDLCDYKCRSTVYLKKHKLTHTGEKQYSCDICDYKSLHFENLRRHKVRHTSEKPFGCDLCDYKFRRNVELKKHMLTHTGEKPLSCDICGKRFLHSGSLKYHVLTHTGEKPFTCNVCGYQARESGVLKKHMRMHTGEKPVSCDICDKKFRRRENLKRHLRIHTGEKPFSCNICGYQSQQSKYLKKHVLIHTDEKPFTCNFCSYVCRDKGRLKEHARKHTDEKPFSCDLCDFKCRYSVSLKGHTLIHTDEKPFSCDLCRFKTRQSGNLEKHRLTHTGEKTFSCDLCDYKSIRLGNLKRHKLIHTGELPFFCGVCSREFGQITLLKQHMRDHDIQKP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01258285;
90% Identity: iTF_01258285;
80% Identity: iTF_01258285;