Basic Information

Insect: Prosopocoilus inquinatus
Gene Symbol: RREB1
Assembly: GCA_036172665.1
Location: CM069879.1:15912616-15919498[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.00036 0.022 16.1 1.4 1 23 91 113 91 113 0.98

2 14 0.00051 0.032 15.6 0.2 1 23 126 148 126 148 0.97

3 14 1.1e-05 0.00072 20.8 4.3 1 23 154 176 154 176 0.99

4 14 0.052 3.2 9.3 2.3 2 23 269 291 269 291 0.97

5 14 0.27 17 7.0 0.8 1 21 341 361 341 362 0.94

6 14 0.066 4.1 9.0 0.2 1 23 503 525 503 525 0.98

7 14 1.6e-05 0.001 20.3 0.8 1 23 533 555 533 555 0.99

8 14 0.0017 0.1 14.0 3.1 1 23 561 584 561 584 0.97

9 14 0.0014 0.089 14.2 2.8 1 23 976 999 976 999 0.96

10 14 0.00099 0.062 14.7 0.4 2 23 1218 1239 1217 1239 0.97

11 14 0.25 16 7.2 6.3 1 23 1245 1268 1245 1268 0.97

12 14 0.085 5.3 8.6 1.1 1 20 1297 1317 1297 1318 0.94

13 14 0.033 2.1 9.9 0.4 3 23 1448 1468 1446 1468 0.93

14 14 0.015 0.94 11.0 5.9 1 23 1474 1496 1474 1496 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.00036	0.022	16.1	1.4	1	23	91	113	91	113	0.98
2	14	0.00051	0.032	15.6	0.2	1	23	126	148	126	148	0.97
3	14	1.1e-05	0.00072	20.8	4.3	1	23	154	176	154	176	0.99
4	14	0.052	3.2	9.3	2.3	2	23	269	291	269	291	0.97
5	14	0.27	17	7.0	0.8	1	21	341	361	341	362	0.94
6	14	0.066	4.1	9.0	0.2	1	23	503	525	503	525	0.98
7	14	1.6e-05	0.001	20.3	0.8	1	23	533	555	533	555	0.99
8	14	0.0017	0.1	14.0	3.1	1	23	561	584	561	584	0.97
9	14	0.0014	0.089	14.2	2.8	1	23	976	999	976	999	0.96
10	14	0.00099	0.062	14.7	0.4	2	23	1218	1239	1217	1239	0.97
11	14	0.25	16	7.2	6.3	1	23	1245	1268	1245	1268	0.97
12	14	0.085	5.3	8.6	1.1	1	20	1297	1317	1297	1318	0.94
13	14	0.033	2.1	9.9	0.4	3	23	1448	1468	1446	1468	0.93
14	14	0.015	0.94	11.0	5.9	1	23	1474	1496	1474	1496	0.98

Sequence Information

Coding Sequence: ATGCAAGGCATCGTCTATATGCCTCAGAATCTTGAAACTGGTTCCACGCCTCCTTATAAAAACGCTGATACAAATGCAAACATGGATTTAACAACCGAACCAAACGTAACCAAAGAATTCTCTGGACATCAAAGCGGTCGAAACGACTCAGGATTTCTGTCGGCAACCAACAACACGTCTTATTCAGAAGAAGAGGCGGCGGCGAAAGGAGCTCAACAGGACGGGGGTGATACGGACAATCGCAGTGACTGCAGTTCTCCCGACCGAAAATATTACTGCCCCATCTGCGAGACCATGCTGACTTCCCAACACGAATTTACTTTGCACATCAGATCTCATAACAACGATGCCGAAAAGCAAATTCCAGAAAAGGGCTTCGTCTGCCGAATTTGCTCCAAAGTGCTCAGCTCCAGCTCGAGCTTAGACAGGCATGTTCTGGTACACAGTGGAGAAAGACCTTTCACCTGCAAATACTGTGGGGACACCTTCACGACCAATGGTAACATGCACAGACACATGCGTACTCACGCGTACAGACACGACTATGAATCTGATGCCAGTACAGATAGCAGTTCCAGTTCCAAAAATATagaatttaataacaataaggTAGATAAGAACGAAAACAAACGTCAATTAGACTTAAGCAATAATGAGCACAAGAATTTCCGCAAGAAATATGACAACGAAGTACCTGAAaacaatattcaaaaaatcaagtGTCCCGTCTGCGACAGAGACGACTTCAGTTCCATAAGCACCCTCGACTATCACCTGGAAGACAACCACCCAGACTATCCGGCCAAATGCAACCAATGCAACCAAATcttcaaaaacaacaaaatcttGAATCTGCATCGTAACACCTCGCATTCCAACGAGGAAAACGGAAAGACCTACAAGAACTCCGTCATCGGCTTCAAAGACCTGACCTTCGTGGATTTTTCCAGCGAGAAATTTCCGCACATCGCTCGCTACGAGTGCGAGAAAAACCTGCACAAGGCATCGACGGGACTCAAGTTTCAATGTCAGAAATGCTCCAGGGCCTTTCCCTGTGCAAGTTCTTTGGATATACACCAAAACAACTGCTGCGTAGGTATAGACTACAACGTGACAGAAAATTCCTTGGACTTGACGAAGAAATCGAAGCTATCCGAGAAAGAAATAAGACGCGCGGATTTCTTTTCACGCCTGGATTTGCAAGATAATTCCCCAGAAGAGCCAATCCAGAAAAAGGACTCGCCTGTAACGACAACGAATAAATTGCAGCAGAGGTTATTGGAAAGCGCGGTCAAAACGATTGACAGTGGAAAGGACTTGGCTGATATTCAGTCTATCTTATCCATGACAGCTAACGGGAGATTGCTCCAGCATCTCCAAGGGGCAAACGACTCAAACACATCTCACCAAAGCAACCTTGTCGACGTGCATCAGGAAAAGACGGAAGAAGAAGAGAGTCAAGACGTTTTCGCCGTTGAGTTTCGCAAGATGAAACTACGCGGAGAATTTCCTTGCCGCCTTTGCACGGcaatttttcctaatttacgGGCGCTTAAAGGCCACAATCGCACTCACCTGAGTAGCAACAATGGAACGTATAGGTGCAATATGTGTCCTCATTCATCCATCGATAAAGCCGCTCTGATTCGTCATATGCGTACTCATAACGGTGATCGTCCATATGAGTGTTCCCTCTGCAATTACGCATTCACGACGAAAGCCAATTGCGAGAGGCATTTAAGAAACAGGCACGCCAAAACAACGCGGGAAGAAGTCAAGAAATCCATAATTTATCATCCTTCTGAAGACCCGACGAACGATGAAATGAACACAAGAACAAGTACGAGGGAGGACGCAAAGAAACTACCCTCTGGAAACGTCGAGGTGAACGACGATAAAAATACACCGAATCCAATTTCCGCTCATAACTTAGACACCCTCGACTCAGCTCCTAAAGCGAAAGATTTAAGCCCCCTCCTTCCATTAACTCTTCAGCTTCAAGCCTGGAAAAGTTCCTTTAACCTAGACAACATCCCCCCAAAACCTGTGCTCTCGATGGCCAACATAATCCAAAACGAAAACTTAAAAGAACACGGTAAACCAAGCAATGAGACGTCGTCACCTTTGCTCCAGAAACACTTTAATTTCACTCCAAACACCGTTAATACTTCAACCCCGCAAAAACCGAAAATCCAAGTGAAGAAACTGGAGACCCTTAAACAACCGATTGCCTATGAATATTCGGATGAGGAAGACAGTAGTAACTTCAAGAACGAAGAAGAACCCATGGATTTAAGCACCAAGAGGCCGGAAGTTGAAGAAGAACAAAAAGCGAAAGAAAAGGCAGAAGAAGAAGCACCGCAGGATTTAACAAAGAAAGCCCCCGTCAACTCACCCTTCAGTATATCAGAGATTTTAACGCAGGAGCTTATGAAGAACGCTCCAAAAATTGAACACTCCGGTCTCTATCACGCCCCATTTTCCTTCCTGCGTCACGGTTTTCCAGGCTTGGGAAACTGGCCGCCGTTTCCTGCAATCAATCCTTTGCTGTTTCAACCTCCGATCTTACCTCAGGATACCCAAGAAATGAAACGTCTCCAACGCCAACTTTGCGGTGGCGGGATGGTTAATAATTTCACCGAGACACTTCCTTACCAACCATTGAGTAACGCCATGCACGGTTTCAAGACCGAATTAAAATACGCTGGTTCGAAATACCCTCcgcccaatcaaattaaaatggaaGACGTGAAACCGTTGACTTTAAACATTGATCAAACTTTCTCCGACATTGGGAAAATGCAGAGTCCTATCTCGCATTCGAAGCCTGAACTTATGCAATCTCCCAACTCGGTGAAAATGGTCATAAAAAACGGAGTCCTCATGCCCAAACAGAAACAGCGAAGATATCGCACTGAACGACCTTTTTCTTGTGAACATTGCTCCGCCAGATTTACTCTAAGATCCAATATGGAAAGACACATTAAGCAACAGCATCCTCAGTTCTGGTCGCAAAGGCAAAGGTCGAACATCGGAAACCCTGGGAGGAAGCACCATTCCGTGACAACCGTAAAACATTCAGGTGAAGTCAACCCGCCCTTGTATGATATACCAAAGATCCCCGATTATAACAGCAAAGAAACCAAAGACAACCACATTTCCGACAAAATTAAATACGCCATCTTAGCTCAGCACTTGAGGGTTAACCCAAATTTCAAGGAGGGTTTTGCATCCGTAAAAAAAGAGGAAGACGAAGATTGTGAGCTCGTCATCGACGAAAATGACGAGAAGAACGACGCCGGCGACGCGCAAACTTTGAAAAATCGGATTTTGGAGGAGAAGCTTAAAGAATTTCCTAATTTGGAACTGCCGTCGAAAATCGCGAAGAACGAAGAAACTCAAGATTTGGTGCCCGTCTCCCGATTGCTGGATAACGCATCGCAGCAGCAATTCAAGGAGTATTTCAGAAGGGACGGCGAAGAACAGGAAGTCGAAGGGGTGAGCGAAGAAGACGAGGAGGGTTTGGTGGCAAGCGGAAGCACGAGTGAAGGGAACTCAGGATCGGATGAGAACAAGTCCGAATCGGAACACCTTACGGTTCAAGAGCCTGCCAAAAAGAAGTCTGCGTATTCCCTTGCACCCAACAGGGTGAGTTGTCCGTATTGCAGCAGAAAGTTCCCGTGGACTTCTTCCCTGAGGAGGCACATACTAACTCACACTGGGCAAAAACCCTTCAAATGCAGTCACTGCCCTTTGCTGTTCACCACCAAATCCAACTGCGATCGCCATCTACTACGAAAACACGGTAATTCCGCCACTACCATCAGCAACGACTCGGGTAACAGCAACAACTCGAATTATTTAATGAGGAACGTTCCAGAGCGCCCGTTCAAATGCTCCAGTTGCCCGAGCAGTACGTTTTCGACTTACTCAAACCTGAAGAAGCACATTAGTTGCAAGCATGGTGCTCAAACGGATGACAAGGGGCAAGGAGGATACGAGGCTGGAAGTTCCGAGGACGAGAAGCAAAATCAACCGGACGCCAAAAACGAATGGGATGctcaaatatctcaaaataaaatgatttcgaTGGGGGATTCCCAAACGGTCCAATCAAATTCCGACCTGCCTTTTAAATGTCACTTATGCGAGGGCACGTTCGGTGAAAGAAACGAATGCCTGGACCACATCAAAAATAAGCACCCCTCGGAATACAACTTGCTGATGTCGAAGAACGCCCTGGATAATAACACCTCCACGCCGGAGGAATCCAATAATCAAGATGAAGACGAGAGCGAAATCCGCGGCAAATTCCCGGATTATTCCAATAGGAAAGTCATCTGCGCGTTTTGCATGAGGCGGTTTTGGTCGGCGGAAGACTTGAGAAGGCATATGCGTACACACACCGGCGAAAGGCCGTTCAGCTGTGATATATGCAGAAGGCGGTTTACTTTAAAGCACAGCATGCTGCGCCATCGCAAAAAGCACATTGCCTTCGAAAGCGAGAACTTGTACAGCGACGAAGACAACAACGTACAACACTCACAATCAGACAAATTAAAGTTTAACGTGGCAAGTAAAATATGTGATAAAACCGACGAATCAGATGGTAATGAAGGAAGCGACTTGATCAGCAATCTGCTGGGTATACAAGATAGATCGATCATCGAGCAAGTTTTGACTTCTTCTCCTGACGACGCTGCTAAATTATTAGGTGTTAAGAACGGTGGGCAAGACTAA
Protein Sequence: MQGIVYMPQNLETGSTPPYKNADTNANMDLTTEPNVTKEFSGHQSGRNDSGFLSATNNTSYSEEEAAAKGAQQDGGDTDNRSDCSSPDRKYYCPICETMLTSQHEFTLHIRSHNNDAEKQIPEKGFVCRICSKVLSSSSSLDRHVLVHSGERPFTCKYCGDTFTTNGNMHRHMRTHAYRHDYESDASTDSSSSSKNIEFNNNKVDKNENKRQLDLSNNEHKNFRKKYDNEVPENNIQKIKCPVCDRDDFSSISTLDYHLEDNHPDYPAKCNQCNQIFKNNKILNLHRNTSHSNEENGKTYKNSVIGFKDLTFVDFSSEKFPHIARYECEKNLHKASTGLKFQCQKCSRAFPCASSLDIHQNNCCVGIDYNVTENSLDLTKKSKLSEKEIRRADFFSRLDLQDNSPEEPIQKKDSPVTTTNKLQQRLLESAVKTIDSGKDLADIQSILSMTANGRLLQHLQGANDSNTSHQSNLVDVHQEKTEEEESQDVFAVEFRKMKLRGEFPCRLCTAIFPNLRALKGHNRTHLSSNNGTYRCNMCPHSSIDKAALIRHMRTHNGDRPYECSLCNYAFTTKANCERHLRNRHAKTTREEVKKSIIYHPSEDPTNDEMNTRTSTREDAKKLPSGNVEVNDDKNTPNPISAHNLDTLDSAPKAKDLSPLLPLTLQLQAWKSSFNLDNIPPKPVLSMANIIQNENLKEHGKPSNETSSPLLQKHFNFTPNTVNTSTPQKPKIQVKKLETLKQPIAYEYSDEEDSSNFKNEEEPMDLSTKRPEVEEEQKAKEKAEEEAPQDLTKKAPVNSPFSISEILTQELMKNAPKIEHSGLYHAPFSFLRHGFPGLGNWPPFPAINPLLFQPPILPQDTQEMKRLQRQLCGGGMVNNFTETLPYQPLSNAMHGFKTELKYAGSKYPPPNQIKMEDVKPLTLNIDQTFSDIGKMQSPISHSKPELMQSPNSVKMVIKNGVLMPKQKQRRYRTERPFSCEHCSARFTLRSNMERHIKQQHPQFWSQRQRSNIGNPGRKHHSVTTVKHSGEVNPPLYDIPKIPDYNSKETKDNHISDKIKYAILAQHLRVNPNFKEGFASVKKEEDEDCELVIDENDEKNDAGDAQTLKNRILEEKLKEFPNLELPSKIAKNEETQDLVPVSRLLDNASQQQFKEYFRRDGEEQEVEGVSEEDEEGLVASGSTSEGNSGSDENKSESEHLTVQEPAKKKSAYSLAPNRVSCPYCSRKFPWTSSLRRHILTHTGQKPFKCSHCPLLFTTKSNCDRHLLRKHGNSATTISNDSGNSNNSNYLMRNVPERPFKCSSCPSSTFSTYSNLKKHISCKHGAQTDDKGQGGYEAGSSEDEKQNQPDAKNEWDAQISQNKMISMGDSQTVQSNSDLPFKCHLCEGTFGERNECLDHIKNKHPSEYNLLMSKNALDNNTSTPEESNNQDEDESEIRGKFPDYSNRKVICAFCMRRFWSAEDLRRHMRTHTGERPFSCDICRRRFTLKHSMLRHRKKHIAFESENLYSDEDNNVQHSQSDKLKFNVASKICDKTDESDGNEGSDLISNLLGIQDRSIIEQVLTSSPDDAAKLLGVKNGGQD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00465348; iTF_00466802;
90% Identity: iTF_00465348; iTF_00466802;
80% Identity: -