Basic Information

Insect: Dorcus hopei
Gene Symbol: RREB1
Assembly: GCA_033060865.1
Location: CM065426.1:34835517-34843405[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.00029 0.032 16.2 1.4 1 23 91 113 91 113 0.98

2 14 0.00041 0.046 15.7 0.2 1 23 126 148 126 148 0.97

3 14 9.3e-06 0.001 20.9 4.3 1 23 154 176 154 176 0.99

4 14 0.13 14 7.9 2.2 2 23 270 292 270 292 0.96

5 14 0.22 25 7.1 0.8 1 21 342 362 342 363 0.94

6 14 0.054 6 9.0 0.2 1 23 500 522 500 522 0.98

7 14 1.3e-05 0.0015 20.4 0.8 1 23 531 553 531 553 0.99

8 14 0.0023 0.26 13.3 2.3 1 23 559 582 559 582 0.97

9 14 0.0012 0.13 14.3 2.8 1 23 957 980 957 980 0.96

10 14 0.00081 0.09 14.8 0.4 2 23 1185 1206 1184 1206 0.97

11 14 0.21 23 7.2 6.3 1 23 1212 1235 1212 1235 0.97

12 14 0.069 7.7 8.7 1.1 1 20 1264 1284 1264 1285 0.94

13 14 0.027 3 10.0 0.4 3 23 1414 1434 1412 1434 0.93

14 14 0.012 1.4 11.0 5.9 1 23 1440 1462 1440 1462 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.00029	0.032	16.2	1.4	1	23	91	113	91	113	0.98
2	14	0.00041	0.046	15.7	0.2	1	23	126	148	126	148	0.97
3	14	9.3e-06	0.001	20.9	4.3	1	23	154	176	154	176	0.99
4	14	0.13	14	7.9	2.2	2	23	270	292	270	292	0.96
5	14	0.22	25	7.1	0.8	1	21	342	362	342	363	0.94
6	14	0.054	6	9.0	0.2	1	23	500	522	500	522	0.98
7	14	1.3e-05	0.0015	20.4	0.8	1	23	531	553	531	553	0.99
8	14	0.0023	0.26	13.3	2.3	1	23	559	582	559	582	0.97
9	14	0.0012	0.13	14.3	2.8	1	23	957	980	957	980	0.96
10	14	0.00081	0.09	14.8	0.4	2	23	1185	1206	1184	1206	0.97
11	14	0.21	23	7.2	6.3	1	23	1212	1235	1212	1235	0.97
12	14	0.069	7.7	8.7	1.1	1	20	1264	1284	1264	1285	0.94
13	14	0.027	3	10.0	0.4	3	23	1414	1434	1412	1434	0.93
14	14	0.012	1.4	11.0	5.9	1	23	1440	1462	1440	1462	0.98

Sequence Information

Coding Sequence: ATGCAAGGCATCGTCTATACGCCACAGAATCTTGAAACTGGCTCCACGCCTCCTTACAAAAGCACTGATACGAATGCGAACATGGATTTAACGACCGAACCAAACGCAACCAAAGAATTCTCCGGACACCAAAGCGGCGGCCGAAACGACTCTGGATTTCTGTCGGCGACCAACAACACGTCTTACTCGGAAGAGGAGGCGGCGAAAGGGGCCCAACAGGACGGGGGCGACACGGACAATCGCAGTGACTGCAGTTCCCCCGACCGGAAATACTACTGCCCCATTTGCGAGACCATGTTGACCTCCCAACACGAATTTACCCTGCACATCAGATCTCATAACAACGACGCCGAAAAGCAAATCCCCGAAAAGGGCTTCGTCTGTCGGATTTGCTCCAAAGTGCTCAGCTCCAGCTCGAGCTTGGACAGGCACGTCCTGGTGCACAGCGGGGAGAGACCTTTCACCTGCAAATACTGCGGGGACACCTTCACGACCAACGGCAACATGCACAGACACATGCGTACCCACGCGTACAGAAACGACTACGAATCTGACGCCAGCACCGACAGCAGTTCCAGTTCCAAAAATGTAATcgaatttaataacaataaggTAGATAAGAACGAAAACAAACGTCAATTAGACCTAAGCAATAACGAGCACAAGAATTTCCGCAAGAAATACGACAACGAAGTACCTGAGAACAATATTCAGAAAATCAAGTGCCCCGTGTGCGAGCGCGACGACTTCAGTTCCATAAGCACCCTCGACTATCACTTGGAAGACAACCACCCAGACTACCCGGCCAAATGCAGCCAATGCAaccaaatattcaaaaacaacAAGATCTTGAACCTCCACCGCAGCACCTCGCATTCCAGCGAGGAAAACGGAAAGACCTACAAGAATTCCGTCGTGGGTTTCAAAGACCTGACCTTCGTGGACTTCTCCAGCGAGAAATTCCCCCACATCGCTCGCTATGAGTGCGAGAAGAACCTGCACAAAGCATCGACGGGGCTCAAGTTTCAATGCCAGAAGTGCTCTAGGGCCTTTCCCTGCGCCAGTTCTTTGGATATACACCAAAACAACTGCTGCGTCGGCTTGGACTTTAACATCACCGAAAACTCCTTGGACTTGACGAAGAAACCAAAGCTCTCCGAGAACGAAATAAGGCGCGCGGATTTTTTCTCGCGCCTAGATTTGCAGGGCAATTCCCCCGAAAAGGACTCGCCCCCAACGACAACGAACAAATTACAGCAGAGGTTATTGGAAAGCGCGGTGAAAACTATCGACGGTGGAAAGGACTTGGCCGATATTCAATCGATCTTATCCCTGACGGCCAACGGGAGATTGCTCCAGCATCTCCAAGGGGCCAGCGACTCGAATACACCCCACCAAAGCAGCAACATCGTCGACGCGCACCAAGAGAAAACGGAAGAAGAAGAGAGCCAAGACGTTTTCGCCGTGGAATTTCGCAAGATGAAACTGCGCGGTGAGTTTCCCTGCCGCCTCTGCACGGCGATATTTCCCAACTTACGGGCGCTCAAAGGCCACAATCGCACACACCTCAGCAGTAACAACAATGGAACGTATAGGTGCAATATGTGTCCTCATTCATCCATCGATAAGGCCGCCCTGATTCGTCACATGCGCACTCATAACGGTGACCGTCCGTATGAGTGTGCCCTCTGCAATTACGCGTTCACGACCAAAGCCAATTGCGAAAGGCATTTGAGAAACAGGCACGCCAAGACGACGCGCGAGGAAGTCAAAAAGTCCATAATCTATCATCCATCTGAAGATCCCACCAACGACGAAATTAACAGGACGACTGCGAGGGAGGACCCATCAAAGAAACTCACCACCTCTGATTTGAACGACGACAAAAACCCCGTTCATAATTTAGACACCCCCGACTCTGCTCCCAAACCAAAAGATTTAAACCCCCTCCTTCCACTGACGCTTCAGCTTCAGGCCTGGAAGAGTTCCTTTAACCTCGACAGCATCCCCCCGAAACCCGTTCTTTCGATGGCCAACATAATCCAAAGCGAAAACTTAAAAGAACACGGCGACACGACGTCGTCGCCTTTGCTCCCGAAGCATTTTAGCTTCACCCCGAAGACCGTGAACACTTCAACTCCGCAGAAGCCGAAAATCCAAGTGAAGAAACTGGAGAGCCTCAAGCAACCGCAACCGATCGCCACCTACGAGTATTCGGACGATGAAGACAGCGATCACTTCAAAAACGAGGAGGAGCCCATGGATTTAAGCACGAAGAAGCCGGAGGTTGAAGAAGTACCGAAAGCGAAAGAAGAGGCGCCGCAGGATTTAACGAAGAAAGCCCCCGTCAACTCGCCCTTTAGTATATCGGAGATCTTGACGCAGGAGCTCATGAAGGGCGCCCCAAAAATCGAACACTCCGGCTTATATCACGCCCCGTTTTCCTTCCTGCGCCACGGATTTCCGGGCCTGGGAAATTGGCCGCCGTTTCCCGCGATCAACCCCTTGCTGTTTCAACCTCAGATGCTACCCCAAGACACCCAAGAAATGAAGCGCCTCCAAAGACAACTCTGCGGTGGTGGGATGGTCAGTAATTTCGCCGAGACACTTCCCTACCAACCACTGCACGGGTTCAAGGGCGATTTAAAATACGCCGGTCCAAAATACCCCCCTCCCAATCAAATCAAAATGGAGGACGTGAAACCGTTGACTTTAAACATCGACCAAAGCTTCTCCGACATTGGGAAAATGCAGAGTCCCCATTCGAAGCCTGAACTCATGCAATCCCCCAACTCGGTGAAAATGGTCATAAAAAACGGGGTCCTCATGCCCAAGCAGAAGCAGCGAAGGTACCGCACCGAGCGGCCGTTTTCCTGCGAGCACTGTTCGGCCAGGTTCACTCTAAGATCGAACATGGAAAGGCACATCAAGCAACAGCACCCCCAGTTTTGGTCGCAAAGGCAAAGGTCGAACATCGGAAACCCCGGCAGGAAGCACCACTCTGTGACGACCGTGAAGGCCAGCACGCCCCCCCTATACGACATACCAAAGATACCCGATTATAACAAAGAAACCACCAAAGACAACCACATCTCCGACAAGATCAAGTACGCCATTTTAGCTCAGCACTTGCGGGCTAACCAAAACTTTGCGATCGTGAAGAAAGAGGAGGACGAAGACTGCGCGCTCGTGATCGACGAAAACGACGAAAAGAACGACGCCCAAACGATGAAAAATCGAATGGTGGAGGAATTCCCTGACTTGGAACTACCGTCGAAAATCGCCAAGAACGAAGAGACTCAAGATCTGGTGCCCGTCTCCCGATTGCTGGATAACGCATCGCAACAGCAATTCAAGGAGTACTTCAGAAGGGACGCCGAAGAGCAGGAAGGTGAGGGGGTGAGCGAGGAAGACGAGGAGGGTTTGGTGGCGAGCGGAAGTACAAGTGAGGGAAACTCGGGATCGGATGAAAACAAGTCCGAATCGGAGCACCTCACAGTTCAAGAACCTGCCAAGAAAAAATCTGCGTATTCGCTTGCCCCCAACAGGGTGAGTTGTCCGTATTGCAGCAGGAAATTCCCGTGGACTTCTTCGCTGAGGAGACACATCCTGACTCACACGGGGCAAAAACCCTTCAAGTGCAGTCACTGCCCCTTGCTGTTCACCACCAAATCCAACTGCGATCGCCATCTACTGCGAAAGCACGGCAATTCCGCCACCACCATCAGCAACGACTCGGGAAGCAGCAACAACTCCAACTATTTGATGAGGAACGTGCCGGAACGTCCCTTCAAGTGCTCCAGTTGCCCCAGCAGTACGTTCTCGACCTACTCGAACCTGAAGAAGCACATCAGTTGCAAGCACGGCGCCCAAACGGACGACAAGGGGCAAGGTTACGAGGCCGGAAGTTCCGAGGACGAGAAGCAAAACCAGCCGGACGTCAAAAGCGAATGGGACGCCCAAATCTCTCAAAACAAAATGACTTCGATGGGGGACTCCCAGACGGTCCAATCGAACTCCGACCTGCCGTTTAAGTGCCACCTGTGCGAGGGGACGTTCGGGGAAAGAAACGAGTGCTTGGACCACATCAAAAACAAGCACCCCTCCGAATACAACCTGCTGATGTCGAAGAACGCCCTGGATAATAACACTTCGACGCCGGAAGAGTCGAACAACCAAGACGAAGACGAGAGCGAAATCCGGGGCAAATTCCCGGATTACTCCAACAGGAAAGTCATCTGCGCGTTTTGCATGAGGCGGTTTTGGTCGGCGGAAGATCTGAGAAGGCACATGCGTACACACACCGGCGAGAGGCCGTTCAGCTGTGATATATGCAGGCGACGGTTTACCTTGAAGCACAGCATGCTGCGCCATCGCAAGAAACACATCGCCTTCGAGAACGAGAACTTGTACAGCGACGAAGACAACTCGGACAAGTTAAAGTGTAACGTGGCAAGTAAAATATGTGATAAAACCGACGAATCAGATGGTAACGAGGGAAATGACTTGATTAGTAATCTGCTCGGTATACAAGATAGGTCGATCATCGAGCAAGTCCTGACTTCTTCTCCCGACGACGCTGCTAAGTTATTAGGTGTTAAGAACGGGGGGCAAGACTAG
Protein Sequence: MQGIVYTPQNLETGSTPPYKSTDTNANMDLTTEPNATKEFSGHQSGGRNDSGFLSATNNTSYSEEEAAKGAQQDGGDTDNRSDCSSPDRKYYCPICETMLTSQHEFTLHIRSHNNDAEKQIPEKGFVCRICSKVLSSSSSLDRHVLVHSGERPFTCKYCGDTFTTNGNMHRHMRTHAYRNDYESDASTDSSSSSKNVIEFNNNKVDKNENKRQLDLSNNEHKNFRKKYDNEVPENNIQKIKCPVCERDDFSSISTLDYHLEDNHPDYPAKCSQCNQIFKNNKILNLHRSTSHSSEENGKTYKNSVVGFKDLTFVDFSSEKFPHIARYECEKNLHKASTGLKFQCQKCSRAFPCASSLDIHQNNCCVGLDFNITENSLDLTKKPKLSENEIRRADFFSRLDLQGNSPEKDSPPTTTNKLQQRLLESAVKTIDGGKDLADIQSILSLTANGRLLQHLQGASDSNTPHQSSNIVDAHQEKTEEEESQDVFAVEFRKMKLRGEFPCRLCTAIFPNLRALKGHNRTHLSSNNNGTYRCNMCPHSSIDKAALIRHMRTHNGDRPYECALCNYAFTTKANCERHLRNRHAKTTREEVKKSIIYHPSEDPTNDEINRTTAREDPSKKLTTSDLNDDKNPVHNLDTPDSAPKPKDLNPLLPLTLQLQAWKSSFNLDSIPPKPVLSMANIIQSENLKEHGDTTSSPLLPKHFSFTPKTVNTSTPQKPKIQVKKLESLKQPQPIATYEYSDDEDSDHFKNEEEPMDLSTKKPEVEEVPKAKEEAPQDLTKKAPVNSPFSISEILTQELMKGAPKIEHSGLYHAPFSFLRHGFPGLGNWPPFPAINPLLFQPQMLPQDTQEMKRLQRQLCGGGMVSNFAETLPYQPLHGFKGDLKYAGPKYPPPNQIKMEDVKPLTLNIDQSFSDIGKMQSPHSKPELMQSPNSVKMVIKNGVLMPKQKQRRYRTERPFSCEHCSARFTLRSNMERHIKQQHPQFWSQRQRSNIGNPGRKHHSVTTVKASTPPLYDIPKIPDYNKETTKDNHISDKIKYAILAQHLRANQNFAIVKKEEDEDCALVIDENDEKNDAQTMKNRMVEEFPDLELPSKIAKNEETQDLVPVSRLLDNASQQQFKEYFRRDAEEQEGEGVSEEDEEGLVASGSTSEGNSGSDENKSESEHLTVQEPAKKKSAYSLAPNRVSCPYCSRKFPWTSSLRRHILTHTGQKPFKCSHCPLLFTTKSNCDRHLLRKHGNSATTISNDSGSSNNSNYLMRNVPERPFKCSSCPSSTFSTYSNLKKHISCKHGAQTDDKGQGYEAGSSEDEKQNQPDVKSEWDAQISQNKMTSMGDSQTVQSNSDLPFKCHLCEGTFGERNECLDHIKNKHPSEYNLLMSKNALDNNTSTPEESNNQDEDESEIRGKFPDYSNRKVICAFCMRRFWSAEDLRRHMRTHTGERPFSCDICRRRFTLKHSMLRHRKKHIAFENENLYSDEDNSDKLKCNVASKICDKTDESDGNEGNDLISNLLGIQDRSIIEQVLTSSPDDAAKLLGVKNGGQD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01258491;
90% Identity: iTF_01258491;
80% Identity: -