Basic Information

Insect: Dorcus parallelipipedus
Gene Symbol: RREB1
Assembly: GCA_958336345.1
Location: OY284477.1:45372505-45377141[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.00033 0.03 16.2 1.4 1 23 65 87 65 87 0.98

2 14 0.00046 0.043 15.7 0.2 1 23 100 122 100 122 0.97

3 14 1.1e-05 0.00097 20.9 4.3 1 23 128 150 128 150 0.99

4 14 0.098 9.1 8.4 2.2 2 23 244 266 244 266 0.97

5 14 0.25 23 7.1 0.8 1 21 316 336 316 337 0.94

6 14 0.061 5.6 9.0 0.2 1 23 474 496 474 496 0.98

7 14 1.5e-05 0.0014 20.4 0.8 1 23 505 527 505 527 0.99

8 14 0.0026 0.24 13.3 2.3 1 23 533 556 533 556 0.97

9 14 0.0013 0.12 14.3 2.8 1 23 932 955 932 955 0.96

10 14 0.00091 0.084 14.8 0.4 2 23 1160 1181 1159 1181 0.97

11 14 0.23 21 7.2 6.3 1 23 1187 1210 1187 1210 0.97

12 14 0.078 7.2 8.7 1.1 1 20 1239 1259 1239 1260 0.94

13 14 0.031 2.8 10.0 0.4 3 23 1389 1409 1387 1409 0.93

14 14 0.014 1.3 11.1 5.9 1 23 1415 1437 1415 1437 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.00033	0.03	16.2	1.4	1	23	65	87	65	87	0.98
2	14	0.00046	0.043	15.7	0.2	1	23	100	122	100	122	0.97
3	14	1.1e-05	0.00097	20.9	4.3	1	23	128	150	128	150	0.99
4	14	0.098	9.1	8.4	2.2	2	23	244	266	244	266	0.97
5	14	0.25	23	7.1	0.8	1	21	316	336	316	337	0.94
6	14	0.061	5.6	9.0	0.2	1	23	474	496	474	496	0.98
7	14	1.5e-05	0.0014	20.4	0.8	1	23	505	527	505	527	0.99
8	14	0.0026	0.24	13.3	2.3	1	23	533	556	533	556	0.97
9	14	0.0013	0.12	14.3	2.8	1	23	932	955	932	955	0.96
10	14	0.00091	0.084	14.8	0.4	2	23	1160	1181	1159	1181	0.97
11	14	0.23	21	7.2	6.3	1	23	1187	1210	1187	1210	0.97
12	14	0.078	7.2	8.7	1.1	1	20	1239	1259	1239	1260	0.94
13	14	0.031	2.8	10.0	0.4	3	23	1389	1409	1387	1409	0.93
14	14	0.014	1.3	11.1	5.9	1	23	1415	1437	1415	1437	0.98

Sequence Information

Coding Sequence: ATGGATTTAACGACCGAACCAAACGCAACCAAAGAATTCTCCGGCGGACACCAAAGCGGCGGCCGAAACGACTCTGGGTTTCTGTCGGCGACCAATAACACGTCTTACTCGGAAGAGGAGGCGGCGAAAGGGGCCCAACAGGACGGGGGCGACACGGACAATCGCAGTGACTGCAGTTCCCCCGATCGGAAATACTACTGCCCCATTTGCGAGACCATGTTGACGTCCCAACACGAATTTACCCTGCACATCAGATCTCATAACAACGACGCCGAAAAGCAAATCCCCGAAAAGGGCTTCGTCTGCCGGATTTGCTCCAAAGTGCTCAGCTCCAGCTCGAGCTTGGACAGGCACGTCCTGGTGCACAGCGGGGAAAGACCTTTCACCTGCAAATACTGCGGGGACACCTTCACGACCAACGGCAACATGCACAGACACATGCGTACCCACGCGTACAGAAACGACTACGAATCTGACGCCAGCACCGACAGCAGTTCCAGTTCCAAAAACATAAtcgaatttaataacaataaggTAGATAAGAACGAAAACAAACGTCAGTTAGACCTAAGCAATAACGAGCACAAGAATTTCCGCAAGAAATACGACAACGAGGTACCTGAGAACAATATTCAGAAAATCAAGTGCCCCGTGTGCGAGCGCGACGACTTCAGTTCCATAAGCACCCTCGACTATCACTTGGAAGACAACCACCCAGACTACCCGGCCAAATGCAACCAATGCAACCAAATATTCAAGAACAACAAGATCTTGAACCTCCACCGCAGCACCTCGCATTCCAGCGAGGAAAACGGAAAGACCTACAAGAATTCCGTCGTGGGCTTCAAAGACCTGACCTTCGTGGACTTCTCCAGCGAGAAATTCCCCCACATCGCTCGCTACGAGTGCGAGAAGAACTTGCACAAAGCATCGACGGGGCTCAAGTTTCAATGCCAGAAGTGCTCTAGGGCCTTTCCCTGCGCCAGTTCTTTGGACATACACCAAAACAACTGCTGCGTCGGCTTGGATTTTAACATCGCCGAAAACTCCTTGGACTTGACGAAGAAGCCGAAGCTCTCCGAGAACGAAATAAGACGCGCGGATTTTTTTTCGCGCCTGGATTTGCAGGGCAATTCCCCCGAAAAGGACTCGCCCCCAACGACGACGAACAAATTGCAGCAGAGGTTATTAGAAAGCGCGGTGAAAACGATCGACGGTGGAAGGGACTTGGCCGATATTCAGTCGATCTTATCCCTGACGGCCAACGGGAGATTGCTCCAGCATCTTCAAGGGGCCAACGACTCGAATACACCCCACCAAAGCAGCAACATCGTCGACGCGCACCAAGAGAAAACGGAAGAAGAAGAGAGCCAAGACGTTTTCGCCGTGGAATTTCGCAAGATGAAACTGCGCGGTGAGTTTCCCTGCCGCCTTTGCACGGCGATATTTCCCAACTTACGGGCGCTCAAAGGCCACAATCGCACTCACCTCAGCGGTAACAACAATGGAACGTATAGGTGCAATATGTGTCCTCATTCATCCATCGATAAGGCCGCCCTGATTCGTCACATGCGCACTCATAACGGTGACCGTCCGTATGAGTGTGCCCTCTGCAATTACGCGTTCACGACCAAAGCCAATTGCGAAAGGCACTTGAGAAACAGGCACGCCAAGACAACGCGCGAGGAAGTCAAAAAATCCATAATCTATCATCCATCTGAAGATCCCACCAACGACGAAATTAACAGGACGACTGCGAGGGAGGACCCATCAAAGAAACTCGCCACCTCCGATTTGAACGACGACAAAAACCCCGTTCATAATTTAGACACCCCCGACTCTGCCCCCAAACAAAAAGATTTAAACCCCCTCCTTCCGCTGACGCTTCAGCTTCAGGCCTGGAAGAGTTCCTTCAACCTCGACAACATCCCCCCGAAACCCGTTCTTTCGATGGCCAACATAATCCAAAGCGAAAACTTAAAAGAACACGGCGACGCGACGTCGTCGCCTTTGCTCCCGAAGCATTTTAGCTTCACCCCGAAGACCGTAAACACTTCAACTCCGCAGAAGCCGAAAATCCAAGTGAAGAAACTGGAGAGCCTCAAACAACCGCCTCAACCGATCGCCCCCTATGAGTATTCGGACGATGAAGACAGCGATCACTTCAAAAACGAGGAGGAGCCCATGGATTTAAGCACGAAGAAGCCGGAGGTTGAAGAAGAACCGAAAGCGAAAGAAGAGGCGCCGCAGGATTTGACGAAGAAAGCCCCCGTCAACTCGCCCTTTAGTATATCGGAGATTTTGACGCAGGAGCTCATGAAGGGCGCCCCAAAAATCGAGCACACCGGCTTATACCACGCTCCGTTTTCCTTCCTGCGCCACGGATTTCCGGGCCTGGGAAATTGGCCGCCGTTTCCCGCGATCAACCCCTTGCTGTTTCAACCTCCGATGTTACCCCAAGACACCCAAGAAATGAAGCGCCTTCAACGTCAACTCTGCGGCGGTGGGATGGTCAATAATTTCGCCGAGACACTTCCTTACCAACCACTGCACGGGTTCAAGGGCGACTTAAAATATGCCGGGCCAAAATACCCCCCGCCCAATCAAATCAAAATGGAGGACGTGAAACCGTTGACTTTAAACATCGACCAAAGTTTCTCCGACATTGGGAAGATGCAGAGTCCCCATTCGAAACCTGAACTCATGCAATCCCCCAACTCGGTGAAAATGGTCATCAAGAACGGGGTCCTCATGCCCAAGCAGAAGCAGCGAAGGTACCGCACCGAACGGCCGTTTTCCTGCGAGCACTGTTCGGCCAGGTTCACCCTGAGATCGAACATGGAAAGGCACATCAAGCAACAGCACCCCCAGTTTTGGTCGCAAAGGCAAAGGTCGAACATCGGAAACCCCGGCAGGAAGCACCACTCCGTGACGACCGTGAAGGCCAACACGCCCCCCCTGTACGACATACCAAAGATACCCGATTTTAACAAAGAAACCGCCAAAGACAACCAAATCTCCGACAAGATCAAGTACGCCATTTTAGCTCAGCACTTGCGGGCCAACCAGAACTTTGCGATCGTGAAGAAAGAGGAAGACGAAGACTGCGCGCTCGTGATCGACGAAAACGACGAAAAGAACGACGCCCAAGCGATGAAAAATCGAGTGGTGGAGGAATTTCCCAACTTGGAACTACCGTCGAAAATCGCCAAGAACGAAGAGACTCAAGATCTGGTGCCCGTCTCCCGATTGCTGGATAACGCATCGCAACAGCAATTCAAGGAGTACTTCAGAAGGGACGCCGAAGAGCAGGAAGGTGACGGGGTGAGCGAAGAAGACGAGGAGGGTTTGGTGGCGAGCGGAAGCACAAGTGAGGGAAACTCGGGATCGGATGAAAACAAATCCGAATCGGAACACCTCACAGTTCAAGAACCTGCCAAGAAAAAATCTGCGTATTCGCTTGCCCCCAACAGGGTGAGTTGTCCGTATTGCAGCAGGAAATTCCCGTGGACTTCTTCGCTGAGGAGACACATCCTGACCCACACGGGGCAGAAACCCTTCAAGTGCAGCCACTGCCCCTTGCTCTTCACCACCAAATCCAACTGCGATCGCCATCTACTGCGAAAGCACGGCAACGCCGCCACCACCATCAGCAACGACTCGGGAAACAGCAACAACTCCAACTATTTGATGAGGAACGTGCCGGAACGTCCCTTCAAGTGCTCCAGTTGCCCCAGCAGTACATTCTCGACCTACTCGAACCTGAAGAAGCACATCAGTTGCAAGCACGGCGCGCAAACGGACGACAAGGGGCAAGGTTACGAGGCCGGAAGTTCCGAGGACGAGAAGCAGAACCAGCCGGACGTCAAGAGCGAATGGGACGCCCAAATCTCTCAGAACAAAATGACTTCGATGGGGGATTCCCAGACGGTCCAGTCGAACTCCGACCTGCCGTTTAAGTGCCACCTATGCGAGGGGACGTTCGGGGAAAGAAACGAGTGCTTGGACCACATCAAAAACAAGCACCCCTCGGAATACAACCTGCTGATGTCGAAGAACGCCCTGGATAATAACACTTCGACGCCGGAGGAGTCGAACAACCAAGACGAAGACGAGAGCGAAATCAGGGGCAAATTCCCGGATTACTCCAACAGGAAAGTCATCTGCGCGTTTTGCATGAGGCGGTTTTGGTCGGCGGAAGATCTGAGAAGGCACATGCGTACACACACCGGCGAGAGACCGTTCAGCTGTGATATATGCAGGCGACGGTTCACTTTGAAGCACAGCATGCTGCGTCATCGCAAGAAACACATCGCCTACGAGAACGAGAACTTGTACAGCGACGAAGACAACTCGGACAAGTTAAAGTGTAACGTGGCAAGTAAAATATGTGATAAAACCGACGAATCAGATGGTAACGAGGGAAATGACTTGATTAGTAATCTGCTCGGTATACAAGACAGGTCGATCATCGAGCAAGTCCTGACTTCTTCTCCCGACGACGCTGCTAAGTTATTAGGCGTTAAGAACGGGGGGCAAGACTAG
Protein Sequence: MDLTTEPNATKEFSGGHQSGGRNDSGFLSATNNTSYSEEEAAKGAQQDGGDTDNRSDCSSPDRKYYCPICETMLTSQHEFTLHIRSHNNDAEKQIPEKGFVCRICSKVLSSSSSLDRHVLVHSGERPFTCKYCGDTFTTNGNMHRHMRTHAYRNDYESDASTDSSSSSKNIIEFNNNKVDKNENKRQLDLSNNEHKNFRKKYDNEVPENNIQKIKCPVCERDDFSSISTLDYHLEDNHPDYPAKCNQCNQIFKNNKILNLHRSTSHSSEENGKTYKNSVVGFKDLTFVDFSSEKFPHIARYECEKNLHKASTGLKFQCQKCSRAFPCASSLDIHQNNCCVGLDFNIAENSLDLTKKPKLSENEIRRADFFSRLDLQGNSPEKDSPPTTTNKLQQRLLESAVKTIDGGRDLADIQSILSLTANGRLLQHLQGANDSNTPHQSSNIVDAHQEKTEEEESQDVFAVEFRKMKLRGEFPCRLCTAIFPNLRALKGHNRTHLSGNNNGTYRCNMCPHSSIDKAALIRHMRTHNGDRPYECALCNYAFTTKANCERHLRNRHAKTTREEVKKSIIYHPSEDPTNDEINRTTAREDPSKKLATSDLNDDKNPVHNLDTPDSAPKQKDLNPLLPLTLQLQAWKSSFNLDNIPPKPVLSMANIIQSENLKEHGDATSSPLLPKHFSFTPKTVNTSTPQKPKIQVKKLESLKQPPQPIAPYEYSDDEDSDHFKNEEEPMDLSTKKPEVEEEPKAKEEAPQDLTKKAPVNSPFSISEILTQELMKGAPKIEHTGLYHAPFSFLRHGFPGLGNWPPFPAINPLLFQPPMLPQDTQEMKRLQRQLCGGGMVNNFAETLPYQPLHGFKGDLKYAGPKYPPPNQIKMEDVKPLTLNIDQSFSDIGKMQSPHSKPELMQSPNSVKMVIKNGVLMPKQKQRRYRTERPFSCEHCSARFTLRSNMERHIKQQHPQFWSQRQRSNIGNPGRKHHSVTTVKANTPPLYDIPKIPDFNKETAKDNQISDKIKYAILAQHLRANQNFAIVKKEEDEDCALVIDENDEKNDAQAMKNRVVEEFPNLELPSKIAKNEETQDLVPVSRLLDNASQQQFKEYFRRDAEEQEGDGVSEEDEEGLVASGSTSEGNSGSDENKSESEHLTVQEPAKKKSAYSLAPNRVSCPYCSRKFPWTSSLRRHILTHTGQKPFKCSHCPLLFTTKSNCDRHLLRKHGNAATTISNDSGNSNNSNYLMRNVPERPFKCSSCPSSTFSTYSNLKKHISCKHGAQTDDKGQGYEAGSSEDEKQNQPDVKSEWDAQISQNKMTSMGDSQTVQSNSDLPFKCHLCEGTFGERNECLDHIKNKHPSEYNLLMSKNALDNNTSTPEESNNQDEDESEIRGKFPDYSNRKVICAFCMRRFWSAEDLRRHMRTHTGERPFSCDICRRRFTLKHSMLRHRKKHIAYENENLYSDEDNSDKLKCNVASKICDKTDESDGNEGNDLISNLLGIQDRSIIEQVLTSSPDDAAKLLGVKNGGQD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01258491;
90% Identity: iTF_01258491;
80% Identity: -