Basic Information

Insect: Prosopocoilus inquinatus
Gene Symbol: -
Assembly: GCA_036172665.1
Location: CM069874.1:15606306-15610874[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 5.1e-06 0.00032 21.9 0.4 1 23 163 185 163 185 0.99

2 15 0.00015 0.0091 17.4 3.4 1 23 191 213 191 213 0.93

3 15 0.00033 0.021 16.2 5.3 1 23 219 241 219 241 0.98

4 15 2.6e-07 1.6e-05 26.0 1.2 2 23 248 269 247 269 0.97

5 15 3.2e-05 0.002 19.4 0.1 1 23 275 297 275 297 0.97

6 15 4.5e-06 0.00028 22.1 1.2 1 23 303 325 303 325 0.98

7 15 4.6e-06 0.00029 22.1 0.9 1 23 331 353 331 353 0.98

8 15 3.3e-06 0.00021 22.5 1.9 3 23 361 381 359 381 0.93

9 15 1.1e-06 7.1e-05 24.0 3.1 1 23 387 409 387 409 0.99

10 15 7.1e-08 4.4e-06 27.8 2.2 1 23 415 437 415 437 0.98

11 15 6.4e-06 0.0004 21.6 0.6 1 23 446 468 446 468 0.97

12 15 4.6e-06 0.00029 22.1 1.3 1 23 474 496 474 496 0.98

13 15 9.1e-06 0.00057 21.1 0.1 1 23 502 524 502 524 0.98

14 15 3.9e-06 0.00024 22.3 1.3 1 23 530 552 530 552 0.99

15 15 3.4e-06 0.00021 22.5 0.2 1 23 558 582 558 582 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	5.1e-06	0.00032	21.9	0.4	1	23	163	185	163	185	0.99
2	15	0.00015	0.0091	17.4	3.4	1	23	191	213	191	213	0.93
3	15	0.00033	0.021	16.2	5.3	1	23	219	241	219	241	0.98
4	15	2.6e-07	1.6e-05	26.0	1.2	2	23	248	269	247	269	0.97
5	15	3.2e-05	0.002	19.4	0.1	1	23	275	297	275	297	0.97
6	15	4.5e-06	0.00028	22.1	1.2	1	23	303	325	303	325	0.98
7	15	4.6e-06	0.00029	22.1	0.9	1	23	331	353	331	353	0.98
8	15	3.3e-06	0.00021	22.5	1.9	3	23	361	381	359	381	0.93
9	15	1.1e-06	7.1e-05	24.0	3.1	1	23	387	409	387	409	0.99
10	15	7.1e-08	4.4e-06	27.8	2.2	1	23	415	437	415	437	0.98
11	15	6.4e-06	0.0004	21.6	0.6	1	23	446	468	446	468	0.97
12	15	4.6e-06	0.00029	22.1	1.3	1	23	474	496	474	496	0.98
13	15	9.1e-06	0.00057	21.1	0.1	1	23	502	524	502	524	0.98
14	15	3.9e-06	0.00024	22.3	1.3	1	23	530	552	530	552	0.99
15	15	3.4e-06	0.00021	22.5	0.2	1	23	558	582	558	582	0.94

Sequence Information

Coding Sequence: ATGAACATGACAGAAACTGTTGAGGCAAATAAACTCTGCAGAACGTGTTTGTCACAGacgaacgaattaaaaaacatttacGACAAATCAGGCGTACACGAAAACGTAACCTTAGCGGATATGTTGAGGAGCTGCACTTCTTTAGCGTTTTTAGAGAACGACGGGCTACCGTCGAGCCTCTGCAAGGAGTGCCACTGCCAATTATTAACCGCGTACACTTTTAAGAGGAAGTGCGAGGAAGCCGATTGTACCTTACGTACGTGTATCATCAACaggattgaagaaaaaaataatcatgatTGTGGAAATGATGATGTTGATGACAACCAAGTGATTAATCAGGATGCTGCTGAGAATGTTTTTAATGCTGCTTATGATGATAGTGTTTCTGCAGATTTGGATAGTTCAAGGTATGAAGGCGCAAGTTTGAACGCCGAATTAGAAACCGCCGTTGTTGATGATGATGAACCAAAACAAAGAAAGTTGTATGAGTGTCGCATCTGCAAAAAGAGCTACGTTCAAAGAACGGGACTCGTCTGGCATATGCGGGTGCACACAGGTGAAAGGCCCTTCCTGTGCAGTCATTGTGgtaaGGGATTTATTCGCAGCGATGACCTGTTGAGACACTGCCGAGTGCACACTGGTGAGAGGCCCTTTAAGTGCACCCTTTGCAAGAGAGGTTTTAAACAGAAGTTCCATTTGTCAGAACACGAGCGTTCTCACATCGGCAAGAGAGAGCTGTCCTGCAAAGAATGTGGAAAGAGTTTTACGAGATATGGAGTTTTACGCACACACATGAGGACACACACGGGGTTAAAACCCTACGCATGTCCGGTGTGCTCCAAGCGATTCGTCGGATCAGATACCTTAGCGAAACACTTGAAGCTACACACCGGAGAAAAACCTCATTCATGCAGCGAGTGTGGGCGGAACTTCGCGCAAGTCGATCAGCTTCAAGTGCACTACAGgacgcacaccggcgaaaagccgTTCGTCTGCTCGATTTGCTCGAAGGCCTTCACGCAACAGCACGGCCTCAACGTGCACTTGCTGAGCCACACCGGCGAGCGCCCCTTTTTGTGCGCGGCTTGCGGAAAGTCGTTCACGAGATCGGACGACCTGAAGAAGCACCACCGCATACACAGCAAAGAACGGCCTTACACTTGCACGTATTGTCCGAAGGCCTTCACTCAGTCCTTCCATCTTTCAGAACACGTCCGGACGCACACAAACGATAAAGTATTCTCCTGCAGTATATGCAACAAGACCTTCACTAGAAACGGTTCGTTGCGTTCTCACTTGAGGACGCACACGAAGAGCTACGCCGAGAAACAGTTCGCCTGCAGCATATGCGAGAAACGCTTCAGTATAAGCTATTCGTTGAATAAGCATATgttgatacacaccggcgagagacCGTATTCCTGTGATTTATGTGCTAAATCATTCACCCAATCAGGACACCTAGAAACGCACCTCAAGGTGCACACGGGCGAGAAGCCTTACATCTGCCAGGTGTGCGGGAAGGGCTTCGCCGTCAGTTCTCGCTTAACCGTACACGTTAGGACGCATACGGGTGAGAAGCCGTACGTATGTTCAGTTTGCGGAAAGGGATGCACCACCTCGACCATGCTCAAGATACATGTGAGGACTCATACAGGCGAGACTCCGTACCCATGCCCCTCTTGCCCTAAAGCCTTCTCGAGGTCGGACTTGTTGAATTTGCATCGACGAACGAACGGacattaa
Protein Sequence: MNMTETVEANKLCRTCLSQTNELKNIYDKSGVHENVTLADMLRSCTSLAFLENDGLPSSLCKECHCQLLTAYTFKRKCEEADCTLRTCIINRIEEKNNHDCGNDDVDDNQVINQDAAENVFNAAYDDSVSADLDSSRYEGASLNAELETAVVDDDEPKQRKLYECRICKKSYVQRTGLVWHMRVHTGERPFLCSHCGKGFIRSDDLLRHCRVHTGERPFKCTLCKRGFKQKFHLSEHERSHIGKRELSCKECGKSFTRYGVLRTHMRTHTGLKPYACPVCSKRFVGSDTLAKHLKLHTGEKPHSCSECGRNFAQVDQLQVHYRTHTGEKPFVCSICSKAFTQQHGLNVHLLSHTGERPFLCAACGKSFTRSDDLKKHHRIHSKERPYTCTYCPKAFTQSFHLSEHVRTHTNDKVFSCSICNKTFTRNGSLRSHLRTHTKSYAEKQFACSICEKRFSISYSLNKHMLIHTGERPYSCDLCAKSFTQSGHLETHLKVHTGEKPYICQVCGKGFAVSSRLTVHVRTHTGEKPYVCSVCGKGCTTSTMLKIHVRTHTGETPYPCPSCPKAFSRSDLLNLHRRTNGH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00465165; iTF_00466589;
90% Identity: iTF_00465165; iTF_00466589;
80% Identity: -