Paka001277.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Propsilocerus akamusi
Gene Symbol
Hr39
Assembly
GCA_018397935.1
Location
CM031470.1:5438782-5441249[-]

Transcription Factor Domain

TF Family
SF-like
Domain
zf-C4|SF-like
PFAM
AnimalTFDB
TF Group
Zinc-Coordinating Group
Description
The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 4 2 1.5e+04 -13.5 21.3 33 170 140 286 5 317 0.72
2 4 4.8e-09 3.5e-05 23.1 0.0 1 32 401 435 401 448 0.75
3 4 0.0054 39 3.2 0.0 89 135 458 504 444 520 0.74
4 4 2.2e-76 1.6e-72 244.9 0.0 203 408 519 719 507 719 0.97

Sequence Information

Coding Sequence
ATGTCAAATATTTCAGTGACAAATATCAATTGTCCCAGTGAATCAGAATCATCGGCATCATCGATGCAATCGGCCATGGATCAACAGACAACAGGTGTCGAAAATGTGCACATAACAGTGCCGAAGATTGAAGACACTTCAGATAATTCCGATAGTGAATTGGAATTGAGTAACATTGAAAAGACTGCACGCGTTCATATGCGTAATGTGAAGTCCACAGCAAATGGCCGGCCAATGTCGTGGGAGGGCGAACTATCTGAAAATGAGGAAATGATGGAGGTGGAAAAATCGAGTCCTGTTGAAATGGCATGTGACCAAAAGCCAATTAAACCGGAAGTCATCACACCCACTGAAGCCATTATAAATAATCCCAGTTGTAGCAGTAGTAATAACAATAATAGTAGTAACAATAATAATAGTACCGTTCAGCAACTTAAGGTGCCAGTAACATTTGGGATCACAAAGAAATTCCCTGAAATTGTTAATCTTAAATTTGAGCCGGGAACATCATCACAGCACTCCGGCAGTGTATATCAAGAGTCATTGATAAATAGCCCATTGCTGGTGCGCTCAAAACAACAATCACTTTTACCCGCCAATCCAAGTCCAGATTCAGCCATCCATTCAATATACACGCAAAGTTCACCCAGTCAGTCGCCACTTACATCACGACACGCACCATACACGCCTTCATTGAGCCGTAATAACAGCGATGCATCGCACAGCTCATGTTACTCGTATAGTTCCGAATTTAATAGTCCAACGCATTCACCCATTCAAGGACGACATTCAATATATGCCGCGGCCACTGCATCAGCTTCCAACGGTCAACAATTCAATGGAACCCTTCACCATTCCATGCTATATCGACCGTTAATCGATGGCGATACACAAAACTTCCGGCTGGGAACGAATGAAGAAAATAATAACGATCAGCAGGATGCTGGATTACCAACAGCTGGTATCTCAAGACAACAGCTCATAAATAGTCCATGCCCAATTTGTTCGGATAAAATTTCCGGCTTCCATTATGGAATATTTTCATGTGAATCGTGCAAAGGATTCTTCAAACGGACTGTTCAAAATCGAAAGAACTATGTGTGTCTTCGTGGCGCTTCATGTCCAGTGACAATTGCAACACGCAAAAAATGCCCAGCATGTCGTTTTGAAAAGTGCCTTCAAAAAGGCATGAAACTGGAAGCAATTAGAGAAGATCGTACACGTGGTGGCCGGTCGACATATCAATGCTCATATACACTTCCAGTATCAACCCATTCATCGCATCATCAGGCGATGGGCAACGATGGACATTTGCGTGCTAATGGCAATGGTTTAAAGTGCGATTCTTATGATGGTAAATCGATGAATGGAACGAATGAACACAAAATGAAGCCAGGTGTACCATCACTGCTTCAAGAGATAATGGATGTTGAATATCTGTGGCAATATAATGAAAGTGAACTTACGCGACTGAATCAACCGGCGACGGGCGAAGCAACATCGTCCGACGCTATCAAGAATAATCCATTCTTGGCAAGTGCTGGCGTTACAAATGACAATTCAAGTCCGGATATGATTGCAACTCTGTGCAAAATTGCTGACCATCGACTTTATAAAATTGTCAAGTGGTGCAAAAGTCTCCCGCTATTTAAAAACATTTCGATTGACGATCAAATTTGTCTGCTCATCAATTCATGGTGCGAATTGCTTCTTTTCTCCTGCTGCTTCCGATCTGTTCCAACGCCGGGTGAAATAAAAATTTCACTCGGAAAGTCTATTAATCTTGCGCAAGCTAAATCCAGTGGATTGCATGTTTGCGTTGAAAGAATGCTGAACTTGACGGATCATATGCGCCGATTGAAAGTCGATAAATATGAGTATGTTGCCATGAAAGTCATTGTATTACTCTCATCAGATACAGCAGAGCTGAAGGAACCTGAGAAAGTAAGAGCGAGTCAAGAGAAGGCGCTTCAAGCATTGCAAGCCTACACATTAGGACATTATCCAGATTCACCAGCGAAATTTGGTGAACTTCTTCTAAGAATTCCAGAATTGCAGCGAACTTGTCAGGTTGGCAAAGAAATGTTAACAATTAAGCCGAAGGATGGCGAAGAGCCGTCATTCAATTTGCTTATGGAGCTTCTTCGTGGCGAGCACTAG
Protein Sequence
MSNISVTNINCPSESESSASSMQSAMDQQTTGVENVHITVPKIEDTSDNSDSELELSNIEKTARVHMRNVKSTANGRPMSWEGELSENEEMMEVEKSSPVEMACDQKPIKPEVITPTEAIINNPSCSSSNNNNSSNNNNSTVQQLKVPVTFGITKKFPEIVNLKFEPGTSSQHSGSVYQESLINSPLLVRSKQQSLLPANPSPDSAIHSIYTQSSPSQSPLTSRHAPYTPSLSRNNSDASHSSCYSYSSEFNSPTHSPIQGRHSIYAAATASASNGQQFNGTLHHSMLYRPLIDGDTQNFRLGTNEENNNDQQDAGLPTAGISRQQLINSPCPICSDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCLRGASCPVTIATRKKCPACRFEKCLQKGMKLEAIREDRTRGGRSTYQCSYTLPVSTHSSHHQAMGNDGHLRANGNGLKCDSYDGKSMNGTNEHKMKPGVPSLLQEIMDVEYLWQYNESELTRLNQPATGEATSSDAIKNNPFLASAGVTNDNSSPDMIATLCKIADHRLYKIVKWCKSLPLFKNISIDDQICLLINSWCELLLFSCCFRSVPTPGEIKISLGKSINLAQAKSSGLHVCVERMLNLTDHMRRLKVDKYEYVAMKVIVLLSSDTAELKEPEKVRASQEKALQALQAYTLGHYPDSPAKFGELLLRIPELQRTCQVGKEMLTIKPKDGEEPSFNLLMELLRGEH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01352696;
90% Identity
iTF_01257154;
80% Identity
iTF_01257154;