Basic Information

Gene Symbol
ARID4B
Assembly
GCA_004785975.1
Location
SMLS01059351.1:12979-25051[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 4.2e-28 2.2e-24 86.4 0.2 1 89 297 382 297 382 0.96

Sequence Information

Coding Sequence
atgCAAGGAGACGATCCCCCGTCTTTGCCCGTGGGGACCGCAGTTAGTGCTAAATATAAAGGTGCATTTTGTGAAGCAAAAGTTAGCAATGTTGTTCGTATTGTAAAATGCAAGGTTACTTACAAAATGGGCTTGGGCACTGCAACTGTAGGTGATGAACAGATAAAAGGTAATTTACGTGTTGGGCAATCTGTTCAAGCAAAACATCCGGATAAGAAAGAATTTTTTGACGCTACTATTGTAAAAATACAGGATTGCAGCCAATATACTGTCGtGTTTGATGATGGTGATATAACTACATTAAGAAGAACTGCCTTGTGTCTTAAAAGTGGAAGACATTTTAATGAAAGTGAAACATTGGACCAATTACCTTTAACGCATCCGGAGCATTTTGGAAATCCAGTTATGGGAGGTAGAGGTGCAAGAGGCAGAAGGAGTAGGCAGctaaaGGAAGACAGCAGTGAAGGTGAAGCTGAGGAGGAAAATGAGCCAGACTTAGAAATGTATAGTGCTGATATTGGACGCGTTGTGAGTGTTGAGTCTAGTGAAAAAAAGCGCAATAAAGACAATTGGTTTCCTGGACTAATAGTTATGCCTTCTGCTCAACCTACTGTTAAGATAAATGTAAAGGATGAATTTCTAGTGCGATCATTTAAAGATGGACGATATTACACTGTGCCTAAAAAAGAGGTATCGGAATTTACTCGCGAAATGGGTGCACGTGTTGAAAGCAATGTTCTGGCTGAAGCTGTAGAAAAAGCGTTAAAATACTTGGACGAAGATGAATTGCCAATCCACTGGGAAAAGAGCTCCCTGTTCAATACGCAACATCAGTACACAGATTCCGAAGAAAATTTTACAGATAGTTCTGATGATGAGCCACGCGAGGAAAAAGACCACTTTGTAGCACAACTGTACAAATTTATGGACGACAGTGGAACGCCGTTGAATAAAAGTCCAATGATCGGCAGTAAGGATGTCGACTTGTATCGTTTGTTCCGAATTGTTCATAAACTCGGCGGCTATAATAGAGTTACGAATCAAAATAAATGGAGAACGGTTACTTTACGACTGAAATTCTCGAACAgtcagaatatttttaatcaagtAAAAACGGTATACAAGAAATGTTTGTTTTCTTATGAAGCCTTTTACCGTACCTTGGGTTGTACGATGTCAGATCACACCAGAAGTGCCAAGAAAAATCGGGGGAGGTCTTTAATTAGAGACAAAGACCGCATTACACCCGTTCAAAGTCCTAGACCGGAAAAAGATGAAGTTCCGCCGGAACAATCTGATAAGAAAGAAGAGGAGGAGAAAGTTAAAGTAAAAAAGACTGAACCGAAGAAAATTGATGAGAAAATTGACGAGAAAAAACGACATTTGGGGAATAGCGATACCAATAGTGAAGAGACCGTGGAGCAAGTAGAGGCTGTTGCAAGTACATCGAAAGACAATGGTGGACGACCTAAACGGATAGATGCTATTAAGGGAAACAAGGACAAGAAAGCAAAGGTGCAAGTGATTGAAAAACCTAAACCTGTGGAGAAAATAGAAGAtatcaaaaaagaagaaaaagacaaagaaGATGAAAAGGTTCAACAAACCAGATCTAAAGGATTACCGCCTAAACCTAAAGAAATAGTACCGTCGCCTGACCGAAAGATAAAAGAAACTCCTGTAAAGGAAGCTGTAACAAAATCTGCAGTCAGTAAAATCATCAAGAAAACCGTAGAAGATGATAAAAAACGGGGCCGGAAAAGAATAAACACTGAAGATAAGTCAAACTCTGATAGTACACCTGAACCAACCACTACAACAATTCCTGTAAATATAGGTGATAAGCTTAAAGTATATTATGGGCCAACACATGAATCTAAAGCAGTAACGTATGAGGCTAAAGTTATAGAAATAGATAGTGAAGCTCATGGACCTATATACATGGTACACTACACTGGATGGAATACGCGATATGATGAGTGGATTACGCCCCAACGAATTGCAGAAAACTTAAGTGCTGCCACAAAGGCAAAAAGACTGAAACAAGGAAGTGCAACATCTAAGgttaCTGCCGGTCCGTCAACTGCTATCCCGACACCAGGTACTTCTAAACTACCAAGTAAAAGAGGTCGTGGAATTTCTATAACTGGTAAAAGTGCAGTTACGGAACCACCTAGGTCTACAACTCCGTCTAGTATTACTTCTTCATCCAGTCGTACTAAAAGTCCCGCAACTCCAGCAACTACTAGGACTAGATTAACTCGGCAagGAGAAAGCAACAGACGTACAAGAAGAATCTCAGTTCAAACAGATGTCTCTGTGCAATCAGATTCAGATTCTGAGGGCTCGGAAAGCGAATCGGAGCAGTCCAGAACTCGTAGTGGAAATAAGAGTGAAGATAACGAGTCGAAACCTGTTAGGAAAAGGTTAACAAAAACGAAAGGAGAAAAGAGAAAGGATGATGATGATACTGAAAAAGAAGAGGAAATCGAAAAACCTAAGAAAGCaccaagaaaattaaaaaaatctcttgAACCCAAGCCTACAGATGAAAGCGATGACGATAATATAAGCTTACCTAAAGGGCGCGATTTTGATCTTAATCAGATACGTTCTGAATTGAAAGGAATCACAAAGCTCAAATTACATAGTACAGAAAGCAGCGAAAAAGACACTATTTCATCAGATGATTCTATTAATTTACCTGATATGAAACAAGTACCTGAAGACATtgaagagaagaaagaaaagatCACGGAGAGCACATCCAGTTCCGAagatatttacgaatttaagGAACCCGAGCCATTTGAATTTGAGTCGCATAAAATGGTAGATGATAAAAACAAGAAACGTTTTGTGCCTAGAATATTGGACAATGTAGATAAATCACCTAAGAAGAAAAGTCCAAAGTCGACAATTAAGAAGGAATTCAAATCATTAAGTTCGATGAAGAAAGACGAAGAAGATGAGGATGACAAGGAAATTAAGgTGGACGAAATCGAAGATCCGTTTGATAAGTTAGTAGAATCACCATCATTCCATATAGGGAAATCAACCTCTGAAAAATCGGATGATTACAAGAaagtatccaaaataattaATCTCGACTCGCCATTAGTTCTTTTTAAAGAATTGCCTTTAACTATGGAGGATGAAACTGATGAACGCTTAGATATATCAGACAATGAAGATTCACCTAACGAACCGTTATTTACTCATAAAGAGCACCTTTTTACAAgtgctccattttcaaagtcaTCTCCAAATTCTAATATAGACTCGGATTGTGTAGGATTTACTACGCCAAAATCAGATGACAGAAAACCAACGACCAGCGACGACGAAGATCTGCTGGAATCAACAATGAAAAACGTTTTGTCATTTGATAATGATAGCAATGATGCCTTATTGATGAACCAACCGAGCCCAAAACAAGATGATATATTATCGAAAACGATTACATTAAATAGAGTAGAAAGCGAAGATGAATCCAAAACATCTGAAACTTTTATTGAGAGTAAAGAAACGCAAGAGAAAATTGCTTCGTTATCCCGTCAAATAGCGCCTGTATTTCAAGAAAGCGATTCTACGATTTTGAAAGATCTGTACTCGACACAATTTTCAACAAAGGTTGACAACTTGAAAGATATAAACGTTAAGACTGGAACGAAGATTGCCGATTCAATTCTACAGAAATTTagtatgataaaaaataaagagcCTATAAGTCCTCTTAAACAAGATCCAGTGATTGAGAAGGTAGACGTTGTTCAAACATTGCATGATATACACAGTGAAGTTAAAGTTGAAGATACTGAAGAGCAAGAAGTTAGCGATCTTCTCCAAAAGGAGAACGATGGTAAAGTCAAAACTCCAGAGCAGAAATTAAAAACTCCCTCGCCAAAGGAAAAAATGAttgaaacaaaagtaaaaagttccGAAAAAGTTAAAGACGTAGATCTGAAAAAGCGTAATTCTCGTAAAGTAGTCAGTAAAGAGTTTATCGAGGAATCCGATACAGATACTAGTGATTCAGaTGAAAGACTAATTATGGATGAAGATTCTCAAACTAGTATGTCGCTTGACATGAAACCGGATATCAAGGAAAGCGATAGCAACacttctttcattaaaaacgAACCCATTGAAATTGAGCCTGaaagaaacttcaaatttgaTGCTGTGCCACAAAATGAAGATGCGACTATGAAGGAAGATACAAAAATGGATGTAGAAGGCGTGAAAGAGGAAGAACCAGATTCTCATTCTTTACTATGGTGCGAGGAGACAATTCCAGGAAGTCCTGCGCCTGCCACGAGCGAACATGAAatcaaatcaaagaaaaatgaaCTAGAAATGCCTTTTGCAAGTGTACCATGTAGTAGTACTAACTCAAAGAATTTATTGAGTGAAATAAAGTCGACTGCTAAGGAAAGAATAATACCACCGCCATTAGCAATTAACATGGATAGTCAAGAAAATAGAGATGCTTCGTCTGCAGTTTTGGATAATACGCCACCAACAACACCAGAAAGTACATTAAGTAATTTATCTCCTAGAGGtGAAAATGGCGATTTATCTCCAAACACTGTTGATAATGATAGTTGTAAATCGACGGAAGCTGAAACCGATTATCCCAATTTACGAAGAGGCTCAAGCAATAAAGTGTCTCCATATAGTGAAGAAGATACATTAATGAATAGTGAATCAGGTTCTGCATCGAAAAAGGGCAGAGATGATGCTTTACCTTCACCATGCAAAAAACGACGGAGATCATGTAAAGCCGATGATGTTCCCGCGAAACGGGGCAGAAAACCAACTAATCGTTCTAGGCATAACAGTGATAGCGACGATACATCTGAACATTCAGTACAAGGCAATACTAGCATTAGTCTAATAACTAATGTAGAAACCAGATTAACCCGTTCTCCTAGGCCTTCAAAGTACAATTTCTTTGTTGAATTTGATCCAAGTTTGGATAGTTCGCAAAGAATAGCAGTTTTACAGCAAAAACTTACGGAACTTAGGAAAACTTACGCCAACGTAAAGGCAGAATTAGCTACAATTGAAAGGCGTAGGAAAAAGATTCGAAGAAGAGAAAGAGAAGCGAAAgcaaataaacaagaaatgaCATGCACGTGA
Protein Sequence
MQGDDPPSLPVGTAVSAKYKGAFCEAKVSNVVRIVKCKVTYKMGLGTATVGDEQIKGNLRVGQSVQAKHPDKKEFFDATIVKIQDCSQYTVVFDDGDITTLRRTALCLKSGRHFNESETLDQLPLTHPEHFGNPVMGGRGARGRRSRQLKEDSSEGEAEEENEPDLEMYSADIGRVVSVESSEKKRNKDNWFPGLIVMPSAQPTVKINVKDEFLVRSFKDGRYYTVPKKEVSEFTREMGARVESNVLAEAVEKALKYLDEDELPIHWEKSSLFNTQHQYTDSEENFTDSSDDEPREEKDHFVAQLYKFMDDSGTPLNKSPMIGSKDVDLYRLFRIVHKLGGYNRVTNQNKWRTVTLRLKFSNSQNIFNQVKTVYKKCLFSYEAFYRTLGCTMSDHTRSAKKNRGRSLIRDKDRITPVQSPRPEKDEVPPEQSDKKEEEEKVKVKKTEPKKIDEKIDEKKRHLGNSDTNSEETVEQVEAVASTSKDNGGRPKRIDAIKGNKDKKAKVQVIEKPKPVEKIEDIKKEEKDKEDEKVQQTRSKGLPPKPKEIVPSPDRKIKETPVKEAVTKSAVSKIIKKTVEDDKKRGRKRINTEDKSNSDSTPEPTTTTIPVNIGDKLKVYYGPTHESKAVTYEAKVIEIDSEAHGPIYMVHYTGWNTRYDEWITPQRIAENLSAATKAKRLKQGSATSKVTAGPSTAIPTPGTSKLPSKRGRGISITGKSAVTEPPRSTTPSSITSSSSRTKSPATPATTRTRLTRQGESNRRTRRISVQTDVSVQSDSDSEGSESESEQSRTRSGNKSEDNESKPVRKRLTKTKGEKRKDDDDTEKEEEIEKPKKAPRKLKKSLEPKPTDESDDDNISLPKGRDFDLNQIRSELKGITKLKLHSTESSEKDTISSDDSINLPDMKQVPEDIEEKKEKITESTSSSEDIYEFKEPEPFEFESHKMVDDKNKKRFVPRILDNVDKSPKKKSPKSTIKKEFKSLSSMKKDEEDEDDKEIKVDEIEDPFDKLVESPSFHIGKSTSEKSDDYKKVSKIINLDSPLVLFKELPLTMEDETDERLDISDNEDSPNEPLFTHKEHLFTSAPFSKSSPNSNIDSDCVGFTTPKSDDRKPTTSDDEDLLESTMKNVLSFDNDSNDALLMNQPSPKQDDILSKTITLNRVESEDESKTSETFIESKETQEKIASLSRQIAPVFQESDSTILKDLYSTQFSTKVDNLKDINVKTGTKIADSILQKFSMIKNKEPISPLKQDPVIEKVDVVQTLHDIHSEVKVEDTEEQEVSDLLQKENDGKVKTPEQKLKTPSPKEKMIETKVKSSEKVKDVDLKKRNSRKVVSKEFIEESDTDTSDSDERLIMDEDSQTSMSLDMKPDIKESDSNTSFIKNEPIEIEPERNFKFDAVPQNEDATMKEDTKMDVEGVKEEEPDSHSLLWCEETIPGSPAPATSEHEIKSKKNELEMPFASVPCSSTNSKNLLSEIKSTAKERIIPPPLAINMDSQENRDASSAVLDNTPPTTPESTLSNLSPRGENGDLSPNTVDNDSCKSTEAETDYPNLRRGSSNKVSPYSEEDTLMNSESGSASKKGRDDALPSPCKKRRRSCKADDVPAKRGRKPTNRSRHNSDSDDTSEHSVQGNTSISLITNVETRLTRSPRPSKYNFFVEFDPSLDSSQRIAVLQQKLTELRKTYANVKAELATIERRRKKIRRREREAKANKQEMTCT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2