Basic Information

Gene Symbol
Arid4b
Assembly
GCA_949128085.1
Location
OX421883.1:53430550-53449777[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 9.8e-28 6.9e-24 85.6 0.2 1 89 297 382 297 382 0.96

Sequence Information

Coding Sequence
atgCAAGGAGACGATCCCCCGTATTTGCCCGTGGGGACCGCAGTTAGTGCTAAATATAAAGGTGCATTTTGTGAAGCTAAAGTGAGCAAAGTTGTTCGTATTGTAAAATGCAAGgTTACTTACAAAATGGGTTTGGGTACCGCAACTGTTAGTGACGAACACATAAAGGGTACTTTAAGAGTTGGTCAATCAGTTCAAGCAAAGCATCCAGATAAGAAAGATTTTGTAGACGCGACTATTGGGAAAATACAGGATTGTAGTCAATATACTGTCgTTTTTGATGACGGTGATATAACTACGTTGAGAAGGACTGCATTGTGCCTGAAAAGTGGAAGACATTTTAATGAAAGTGAAACGTTGGATCAACTACCATTAACACATCCAGAACACTTTGGAAATCCAGTTATGGGTGGACGAGGAGCAAGAGGTAGAAGGAGCAGACAactaaaGGAGGACAGCAGTGAAGGCGAAGCCGAAGAAGAGAACGAACCAGATTTGGAAATGTATAGTGCTGACATAGGCCGTGTTGTGAGTGTTGAATCCAGTGAGAAAAAGCGTAATAAAGACAATTGGTTTCCTGGACTTATAGTTATGCCTTCTGCTCAACCCacagtaaaaataaatgtcaaagatGAGTTTTTAGTGAGATCTTTCAAGGATGGCCGATATTATACGGTTCCTAAAAAGGAGGTGTCCGAATTTACGAGAGAGGCAGGATCTCGTGTTGAAAGTAGTGTACTAGCTGAAGCAGTAGATAAAGCTGTAAAATATTTAGATGAAGATGAATTACCGATACATTGggagaaaaattctttgttcaATACACAGAATCAATATACAGATTCCGACGAAAACTTTACTGATAGCTCAGATGACGAACCTCGGGAAGAAAAAGATCACTTTGTTGCACAATTATACAAATTTATGGATGACAGTGGTACACCTTTAAACAAGAGCCCAATGATTAGTAATAAAGATGTTGATTTGTATCGCCTATTCAGGATTGTCCATAAACTAGGTGGTTACAACAGAGTAACCAATCAAAACAAATGGAGAACAGTAACTTTGCGACTGAAATTTCCAAATAGTCAAAACATCTTTAACCAGGTAAAAGGCGTTTACAAAAAATGCTTATTCTCCTACGAATCCTTCTATCGTACTCTCGGTTGTACAATGTCGGACCATACTAGAAGTTCCAAAAAGAACCGCGGAAGACCATTAATACGAGATAAAGATCGCATAACTCCAGTTCAAAGTCCTAGACCAGAGAAAGAAGAAACGCCTGTGGAGCAACCGAGCGATAAAAAAGACGAAGAAGAGAAAGTTAAAGTGAAGAAAAATGTTGACGAGAAAAAGCGGCCTTTGGAAAACACCGATGACACTGAAGAGAACACGGATCCAGTAGAGGCTGTTGCAGGTACATCTAAAGATAGTGGTGGTCGTCCCAAGAGAGTAGATGCTATTAAAGGGAATAAGGACAAAAAAGTGAAACCACAACCTAGTGAAAAAGCAAAGGTCGTCGAGAAAATTGAAGATACCAAAAAAGATGAAAAAGATAAAGAAGATGAAAAGGTTCAACAAACTAGATCCAAAGGACTGCCAGCTAAAGCTAAAGAAGTCGCCCCGTCACCTGATCGAAAACCAAAAGAACCTTTGTCAAAGGAAATGGTAAAAGCCGCGCCTAGCAAATCTAAAAAGACTTTGGAAGAAGAGAAGAAACGTGGCCGGAAGAGAATAAACACAGAAGAAAAATCAAATTCGGATAGCGCTCCGGAATCTCCATCGTCTGGGACCACAACGCCAGTAAATGTTGGGGACAAACTGAAAGTATATTACGGACCGGCACACGAATCAAAAGCCGTAACCTATGAGGCTAAAGTAATAGGAATAGATAGCGAAGGCCATAGTCCTAAATATATGGTGCATTACACTGGTTGGAACACCCGATATGATGAATGGATTACACCACAGCGTATCGCCGAAAATTTGAGTGCAACTACTAAGACAAAAAGACTGAAACAAGGGGCAACTGCTGTTTCCAAGGCTGCTACTACATCTTCATCTACACCAACTCCGTCAACTTCAAAGCTACCAAGTAAAAGAGGCAGAGGAATGTCTTTAACTGGTAAAAGTACAGCTGAACCTCCAAGATCTACCACACCTTCCAGTATAACTTCTTCCTCTAGCAGAACAAAAAGTCCTGCAACACCAGCTGCTGTCAGAAATGGTAGACTCACCAGACAAGGCGATAACAGTCGACGAACGCGAAGAATATCTGTTCAAACAGATGTATCCGTTCAATCAGATTCTGACTCTGAAGGGTCAGAAAGTGAATCAGAGCAATCTCGCACAAGAGGCGGAAGTAAAAGTGAAGATAGCGAAACAAAACCAGTTAGAAAGAAGCTAACAAAAACAAAAGGCGAGAAGAGAAAAGATGATGACGATACTGAAAAAGAAGAAGAGGTCGAGAAACCTAAGAAAACCcccagaaaattaaaaaaatctctCGAACCAAAACCGATAGATGAAAGTGACGACGACAACATAAACTTGCCAAAAGGTCGCGATTTTGACCTTAATCAGATACGATCAGAGTTAAAAGGAATCACAAAATTGAAAATGCACAGCACTGAAAGTAGTGAGAAGGACACTATATCGTCTGATGATTCCATAAATACACCCGATATTAAATCTGTACCTGAGGAAATAGAAGAGAAGAAGGAAAAACATGCAGAGAGTACATCCAGCTCAGAGGATATATATGAATTCAAAGAACCAGAACCTTTTGAATTTGAATCGCATAAAATAGCTGACGATAAAAATAAGAAGCGTTTCGTGCCAAGAATTATAGATAATATTGATAAGTCTCCCAAAAAGAAAAGTCCAAAATCatcaattaaaaaagaaagtgaGGATAAGAAGAAATTTAAGTGTTTGACTTCCATCAAAAAAGAAGAGGACGAAGAAGATGAGAAGGACATTAAGGTGGAAGAAATTGAAGACCCATTTGATAAACTTGTCGAATCACCATCATTCCACATAGGCAAATCAGCAAATGAAAAGTCAGATGATTATAAAAAAGTTTCAAAGCTCAATCTCGACACACCATTGGGTTTGTTTAAAGATTTAATTGATGAAGATGCTGATGAACGTTTGGATATATCCGATAACGATGATCCCACCGATGAACCGCTCTTTACGCATAAGGAACAACTCTTTACGGGCGCTACTTTTTCGAAAACGTCACCAAATTCTAATATCGACTTGGATTGTGTTGGATTCACTACTCCTAAATCAGACGACCGGAAACCAACTACAAGTGATGATGAAGATATTTTAGAAACGACAATGAAATGTGTTTTATCATTTGATAATGATAGTAATGACGCGTTGTTGATCAGTCAGCCTTGTATTACTTACGAGACTCCGAAACAAACGGATCTGTTGTCTAAGACAATTACACTCACTACAGTGGAAAGTGAAGAAGAATCAAAAACATCTGAAACGTTTGTCGAGGACAAAGATACCCAAGAAAAAATCGCTTCCTTGTCGAGGCAAATAGCGCCTGTTTTTCAAGAGAGCGATTCTTCACTTTTAAAGGATCTTTATTCGCCACAGTTTTCTAGTAAGCCAGATAGCTTAAAAGATATCTCTGTGAAAACGGGTACAAAAATTGCCGACTCTATTCTCCAGAAGTTTAACATGATTAAGAATAAAGATTCTACGAGCCCGATTAAACCGGAACAAACTATTATAAAAGACGAAATCTCTATACAAACTCAGGAGGATATCATCGCAGAACATAAAGCAGAAGAAGATGAAGAATCGGAAATTAAGAAAGTTCTTGAGAAACCAATGGAAAGTAAGACCCAAAGTCCAGATGCTAAATTGAAGACACCTTcaccaaaagaaaaattgatagaGGTGAAGATTAGAACTACAGAAAAGGCAAAGGAAATGGATTTGAAGAAGCGAGTTTCGCGGAAAATCGTTAGTAAAGAATTTATAGAAGATTCTGATACTGATAGCAGTGATTCAGaTGAAAGACTGATCATGGATGAAGACTCGCAAACAAGTCTGTCACTAGATATGAAACCAGATATTAAAGAAAGTGATAGCGAAAGCGCCTCATTTGTTAAACAGGAACAAATTGAAATAGACGAACCAcagagaaatttcaaatttgatcCCGTACCACAAAGTCAAGACGCAAGCATCAAGCAAGATGTCAAAATGGAAATTGAAAGTACCAAAGAGGAAGAACCTGATTCTCATTCTCTGCTGTGGTGCGAGGAAACAATACCGGGAAGTCCAGCGCCCGCTACGTTGGAGCACGAAGGAAAACCCAAGAAAAATGAACTGGAAATGCCTTTCGCTAGTGTACCATGCAGTAGTACCAACACAAAGAATTTGTTAAGTGAAATCAAAACCACCAAAGAGAGAATCATACCACCGCCGATTGCTATTAATATGGATAATCAAGAAAATAGAGATGCTTCATCAGCGGTTTTGGATAACACACCTCCAACTACGCCGGAAAGTACGCTTAGTAATCTGTCGCCTAGAGGAGAAAATGGTGACTTGTCACCTAATACTGCTGATAATGATAGTTGCAAATCAACGGAAGCAGATACTGATTATCCCAATTTACGAAGAGGTTCAAGTAATAAAGTATCACCTTATAGCGAAGAAGacaCATTAATGAATAGCGAATCAGGATCTGCATCAAAAAAAGGAAGAGACGACATTGTACCCTCCCCTTGTAAGAAACGTCGCAGATCGTGCAAAGGTGATGATATTCCTGCCAAGCGAGGAAGAAAGCCTAATAACCGTTCTCGTCACAACAGTGATAGTGACGACACATCAGAGCACTCAGTACAAGGCAATACCAATATTAGTCTGATTAATATAGAGAATAGGTTATCGCGCTCTCCGAGACCTTCAAAGTACAATTTTTACGTTGAATTCGatcCTAGTCTGGATAGTGCTCAGAGAATAGCTGTTTTGCAACAGAAACTTACCGAACTTAGAAAAACTTACGCTAATGTCAAAGCAGAATTAGCCACAATAGAAAGGCGCAGAAAAAAGATCAGGCGAAGAGAAAGAGAagcaaAAGCAAATAAGCAAGAAATGGCATGCACGTGA
Protein Sequence
MQGDDPPYLPVGTAVSAKYKGAFCEAKVSKVVRIVKCKVTYKMGLGTATVSDEHIKGTLRVGQSVQAKHPDKKDFVDATIGKIQDCSQYTVVFDDGDITTLRRTALCLKSGRHFNESETLDQLPLTHPEHFGNPVMGGRGARGRRSRQLKEDSSEGEAEEENEPDLEMYSADIGRVVSVESSEKKRNKDNWFPGLIVMPSAQPTVKINVKDEFLVRSFKDGRYYTVPKKEVSEFTREAGSRVESSVLAEAVDKAVKYLDEDELPIHWEKNSLFNTQNQYTDSDENFTDSSDDEPREEKDHFVAQLYKFMDDSGTPLNKSPMISNKDVDLYRLFRIVHKLGGYNRVTNQNKWRTVTLRLKFPNSQNIFNQVKGVYKKCLFSYESFYRTLGCTMSDHTRSSKKNRGRPLIRDKDRITPVQSPRPEKEETPVEQPSDKKDEEEKVKVKKNVDEKKRPLENTDDTEENTDPVEAVAGTSKDSGGRPKRVDAIKGNKDKKVKPQPSEKAKVVEKIEDTKKDEKDKEDEKVQQTRSKGLPAKAKEVAPSPDRKPKEPLSKEMVKAAPSKSKKTLEEEKKRGRKRINTEEKSNSDSAPESPSSGTTTPVNVGDKLKVYYGPAHESKAVTYEAKVIGIDSEGHSPKYMVHYTGWNTRYDEWITPQRIAENLSATTKTKRLKQGATAVSKAATTSSSTPTPSTSKLPSKRGRGMSLTGKSTAEPPRSTTPSSITSSSSRTKSPATPAAVRNGRLTRQGDNSRRTRRISVQTDVSVQSDSDSEGSESESEQSRTRGGSKSEDSETKPVRKKLTKTKGEKRKDDDDTEKEEEVEKPKKTPRKLKKSLEPKPIDESDDDNINLPKGRDFDLNQIRSELKGITKLKMHSTESSEKDTISSDDSINTPDIKSVPEEIEEKKEKHAESTSSSEDIYEFKEPEPFEFESHKIADDKNKKRFVPRIIDNIDKSPKKKSPKSSIKKESEDKKKFKCLTSIKKEEDEEDEKDIKVEEIEDPFDKLVESPSFHIGKSANEKSDDYKKVSKLNLDTPLGLFKDLIDEDADERLDISDNDDPTDEPLFTHKEQLFTGATFSKTSPNSNIDLDCVGFTTPKSDDRKPTTSDDEDILETTMKCVLSFDNDSNDALLISQPCITYETPKQTDLLSKTITLTTVESEEESKTSETFVEDKDTQEKIASLSRQIAPVFQESDSSLLKDLYSPQFSSKPDSLKDISVKTGTKIADSILQKFNMIKNKDSTSPIKPEQTIIKDEISIQTQEDIIAEHKAEEDEESEIKKVLEKPMESKTQSPDAKLKTPSPKEKLIEVKIRTTEKAKEMDLKKRVSRKIVSKEFIEDSDTDSSDSDERLIMDEDSQTSLSLDMKPDIKESDSESASFVKQEQIEIDEPQRNFKFDPVPQSQDASIKQDVKMEIESTKEEEPDSHSLLWCEETIPGSPAPATLEHEGKPKKNELEMPFASVPCSSTNTKNLLSEIKTTKERIIPPPIAINMDNQENRDASSAVLDNTPPTTPESTLSNLSPRGENGDLSPNTADNDSCKSTEADTDYPNLRRGSSNKVSPYSEEDTLMNSESGSASKKGRDDIVPSPCKKRRRSCKGDDIPAKRGRKPNNRSRHNSDSDDTSEHSVQGNTNISLINIENRLSRSPRPSKYNFYVEFDPSLDSAQRIAVLQQKLTELRKTYANVKAELATIERRRKKIRRREREAKANKQEMACT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01252515;
90% Identity
-
80% Identity
-