Basic Information

Gene Symbol
Arid4b
Assembly
GCA_031763485.1
Location
JARFOC010000523.1:204926-217128[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.2e-27 1.1e-23 85.7 0.2 1 89 294 379 294 379 0.96

Sequence Information

Coding Sequence
ATGGGTAGACGCAAGGATCTTTCACCAAGTAGAAATGCACAGACAAAAATTCTTATCAGTACTAGGGACTATTCAAAAAGGGATGTTGGTAGAAGACTGAACATCTCCGAAGCACGCATCAAGGCTAAGCTTGACTCTGGGCAAGATATAACCCCTAAAAGGAGGAGAAAGTGTGGAAGAAAACCAATCTTTACCGCCAGGGCGGAaaggtgtttaaaaaaatgcctAGAAAATAGATTTGCAACCACAAAACACATCAAAAGCCGTTTGTATCAGTCAAATATTAACGTGTCTGAGCGTACTATACGGCGGAAGTTGAAGGAATTGGGTATCAGGTCTTGTAGGCCAGTTAGGAAACCAAAGCTGACAATGGCGATGAAATCCAAGCGCCTTCAGTGGGCGAGGGAGCACAAGGACAGGGACTTAGAATTCTGGATATCGGAGGATAGCAGTGAAGGTGAAGCCGAGGAGGAAAATGAGCCAGATTTGGAAATGTACAGTGCTGATATAGGACGTGTTGTGAGTGTTGAATCCAGTGAGAAAAAGCGGAATAAAGACAATTGGTTTCCTGGACTGATAGTTATGCCTTCCGCTCAACCCACGGTAAAGATAAATGTCAAGGACGAATTCTTAGTTAGGTCTTTCAAGGATGGCCGATATTATACAGTGCCTAAAAAAGAGGTGGCCGAATTTACGAGAGAAATGGGATCTCGAGTTGAGAGTAGCGTACTTGCGGAAGCAGTAGACAAAgctttgaaatatttagatGAAGATGAGTTACCAATACATTGGGAGAAAAATTCTCTGTTTAATACACAGAATCAATATACCGATTCTGAAGAAAACTTTACTGatAGCTCGGATGATGAACCTCGCGAAGAAAAGGATCACTTTGTTGCGCAATTATACAAATTCATGGATGATAGTGGCACACCTTTAAATAAGAGTCCAATGATTAGCAGCAAAGATGTAGATTTATATCGCTTGTTCAGGATCGTTCATAAGCTAGGTGGTTACAACAGGGTAACGAATCAAAACAAGTGGAGAACAGTAACCCTACGATTAAAATTCCCGAACAGTCAAAACATCTTCAACCAAGTGAAAGCCGTTTACAAAAAGTGCTTATTCTCCTACGAATCATTCTATCGTACTCTCGGATGTACGATGTCGGACCATACTAGAAGCTCTAAGAAGAACCGGGGAAGGCCGTTGATACGAGATAAAGATCGCATAACTCCAGTTCAGAGTCCTAGACCGGAGAAGGAAGAGACACCCGTGGAGCAACAGATCGATAAGAAAGATGAAGAAGAGAAAGGTAAAGCGAAGAAAATCGGTGACGAGAAAAAGCGACCTTTGGAACACAGCGATGACACTGAAGATCACGTCGATCAAGTGGAGGCCGTTGCAGGTACATCCAAAGATAGTGGTGGTCGTCCCAAGCGCGTCGACGCTATTAAAGGGAATAAGGATAAGAAGCTCAAGCCACAAACAAGCGAAAAAGGCAAGCTCATTGAGAAAATAGAAGACGGTAAAAAAGACGAGAAGGATAAAGAAGACGAGaagGTTCAGCAAACCAGATCTAAAGGACTGCCGATTAAACCAAAGGAGGTCGCTCCGTCGCCAGATCGAAAATCAAAAGAATCTTCAACCAAGGAAATAGCGCCAAAAACGACGACAAACAAATCCGCCAAGAAGGCTCTAGAAGAAGAGAAGAAACGTGGTCGGAAGAGACTAAACACTGAAGAAAAATCAAATTCCGATAGTGCCCCGGAATCTCCATCATCGGGGACTGTCACTCCGGTAAATGTTGGGgacaaattaaaagtattttacgGACCAGCACACGAATCAAAGGCTGTAACTTACGAGGCGAAAGTAATAGGAATAGATAGTGAAGGCCATAGTCCTAAATACATGGTACATTACACCGGATGGAATACCCGATATGACGAATGGATTCCACCGCAGCGTATCGCCGAAAATTTGAGCGCCactactaaaacaaaaagacTGAAACAAGGAACAGCTCCAGTTCCCAAGcCAACGGCTAGCACTTCTTCGTCTACACCAACTCCAACTACTTCAAAAATACCAAGTAAAAGAGGTCGAGGAATGTCCATAACTGGTAAAAGTTCAGCGACTGAACCTCCAAGATCTACTACACCTTCTAGCATCACTTCTTCGTCTAGTAGAACTAAAAGTCCTGCTACGCCAGCTGCCGTTAGAAATGGTAGACTTACCAGACAAGGTGATCACAGCAGGCGCACACGTAGAATATCTGTTCAAACAGATGTATCCGTTCAATCAGACTCCGATTCCGAAGGGTCGGAAAGTGAATCTGAGCAATCTCGTACAAGAAGCGGCACTAAGAGTGAAGATAATGAAGGAAAACCGATTAGAAAGAAACTGACTAAAACCaaaggggaaaaaagaaaagaagacgACGATACTGAAAAGGAAGAAGAGACAGAGAAGCCTAGAAAAACGCccaggaaattaaaaaaatcactcGAGCCAAAACCGGCAGATGAAAGCGATGATGACACCATGCATTTGCCAAAAGGTCGGGATTTTGATCTTAATCAGATACGTTCAGAATTAAAAGGCATTACAAAACTGAAAATGCACAGCACGGAAAGTAGCGAGAAGGACACTATCTCATCTGACGATTCCACAAATATACTTGATATTAAATCCGCACCTGAAGAAATTGAAGAGCAGAAGGAGAAACATGCAGAAAGTACATCCAGTTCAGAGGATATATATGAATTCAAGGAACCAGAACCGTTTGAATTTGAATCGCATAAAATTGTtgacgataaaaataaaaaacgtttTGTGCCGAGGATACTAGATAATGTTGAAAAGTCCCCCAAAAAGAAAAGTCCGAAATCGTCAGTTAAAAGGGAAAATgaagacaaaaagaaatttaagtGTTTGAGTTCCACTAAAAAAGAAGACGAAGATGAAGTTGATAAAGAAATTAAGcTGGAAGAAATTGAAGATCCATTTGATAAACTTGTCGAATCACCGTCATTCCATATAGGCAAATCGGCAACTGAAAAATCTGACGAATATAAAAAAGTTTCCAAGCTTAATCTCGACATACCGTTAGTTTTGTTTAAAGAGTTACCTCTAACGATGGACGATGTTAGTGATGAACGTTTGGACATATCAGACAATGATGACCCACCCAATGAGCCACTTTTTACTCATAAGGAACAACTTTTTACCAGCGCTGCTTTCTCGAAAACGTCGCCAAGCTCTAATATTGACTCCGATTGTGTCGGATTCACTACGCTAAAATCAGACGACCGGAAACCAACTACAAGTGACGACGAAGATCTCTTAGAAACAACAAGGAAATGTGTTCTATCGTTCGATAATGATAGTAACGATGCCTTACTGATTAATCATCCCTGTATTACTTATGAGGCTTCAAAATCATCTGATTTGCTATCTAAGACAATTACACTAAATACAGTGGAAAGTGAAGATGAATCAAAAACATCCGAGACGTTTGTCGACAACAAAGATACCGAAGAGAAGATTGCTTCGTTATCAAAGCAAATAGCGCCCGTATTTCAGGAGAGCGATTCAACTCTTCTGAAGGATCTTTATGCACCGCAGTTTTCCAGCAAGTCGGATAGCTTGAAAGATATCACCGTAAAAACGGGCACAAGAATCGCCGATTCTATTCTCCAGAAATTTAAcatgattaaaaataaagatccTACCAGTCCAGTTAAACATGAACAAACCGCTAAAAGAGGCGAAACCTCCATACAAACTCGAGAGGAGGTAATTACGGAAATCAAAAtagaagaagatgaagaagcgGAAATTAAAGAAGTGCTGGAAAAaggtaatgaaataaaagtgaaGAGTCCAGATGTTAAATTGAAAATACCGTCGCCAAAAGAGAAAATGGTAGAGGCAAAGGTTAAAAGTGTAGAAAAAGTCAAAGAATTGGACTTGAAAAAGAGAGTTACGAGAAAAATTGTTAGTAAAGAATTTATAGAAGAATCTGACACTGATAGCAGTGATTCCGATGAAAGACTTATCATGGACGAAGACTCACAAACAAACATGTCACTAGATCTAAAACCAGACACTAAAGAAGGTGATAGCGAAAGCGCCTCATATACTAAAACGGAGGAACAAATTGAAATAGAGGAGGAACCTCAGAGAAATTTCAAATTCGATCCCATACCCCAAAATCAAGACACCAACAGCAAGCAGGAAATCAAAATGGATGCCGAAAGTGTCAAAGAGGAAGAACCCGAATCTCATTCTTTACTGTGGTGCGAGGAAACGATACCTGGAAGTCCAGCGCCCGCCACATCGGAACACGAAATGAAACCCAAGAAAAATGAATTGGAGATGCCCTTCGCCAGCATGCCGTGTAGCAGCACTAATACGAAAAACTTGTTGAGTGAAATTAAAACCACGAACAAAGAGCGAATTATTCCACCACCAATTGCTATTAATATGGATAATCAAGAGAATAGGGATGCTTCCTCTGCGGTGTTGGATAATACACCTCCAACAACACCAGAAAGTACACTCAGTAATCTATCTCCTAGGGGAGAGAATGGTGACTTATCTCCAAACACCGCGGATAATGACAGCTGCAAATCGACGGAAGCAGATATTGATTACCCTAATTTAAGAAGAAGTTCAAGTAATAAAGTATCACCTTATAGTGAAGAAGATACTTTAATGAATAGTGAATCAGGATCTGCATCGAAGAAGGGTATAGACGACATTGTGCCTTCCCCTTGCAAAAAGCGTCGCAGATCGTGCAAAGGTGACGATTTGCCCGCTAAACGAGGAAGAAAGCCAAACCGCTCTCGTCACAATAGCGACAGTGACGATACATCAGAGCACTCAGTACAAGGCAGCACCAATATTAgtctaattaataatttagatacTAGGTTAGCGCGCTCTCCAAGGCCTTCCAAGTACAATTTCTACGTAGAATTTGATCCCAGTCTTGACAGTGCACAAAGAATAGCTGTTTTGCAACAGAAACTCACCGAGCTTAGAAAGACCTACGCCAACGTCAAAGCGGAATTAGCTGCAATAGAAAGGCGTAGGAAAAAGATTAGACGAAGAGAAAGGGAagctAAAGCAAATAAGCAGGAAATGGCATGCACGTGA
Protein Sequence
MGRRKDLSPSRNAQTKILISTRDYSKRDVGRRLNISEARIKAKLDSGQDITPKRRRKCGRKPIFTARAERCLKKCLENRFATTKHIKSRLYQSNINVSERTIRRKLKELGIRSCRPVRKPKLTMAMKSKRLQWAREHKDRDLEFWISEDSSEGEAEEENEPDLEMYSADIGRVVSVESSEKKRNKDNWFPGLIVMPSAQPTVKINVKDEFLVRSFKDGRYYTVPKKEVAEFTREMGSRVESSVLAEAVDKALKYLDEDELPIHWEKNSLFNTQNQYTDSEENFTDSSDDEPREEKDHFVAQLYKFMDDSGTPLNKSPMISSKDVDLYRLFRIVHKLGGYNRVTNQNKWRTVTLRLKFPNSQNIFNQVKAVYKKCLFSYESFYRTLGCTMSDHTRSSKKNRGRPLIRDKDRITPVQSPRPEKEETPVEQQIDKKDEEEKGKAKKIGDEKKRPLEHSDDTEDHVDQVEAVAGTSKDSGGRPKRVDAIKGNKDKKLKPQTSEKGKLIEKIEDGKKDEKDKEDEKVQQTRSKGLPIKPKEVAPSPDRKSKESSTKEIAPKTTTNKSAKKALEEEKKRGRKRLNTEEKSNSDSAPESPSSGTVTPVNVGDKLKVFYGPAHESKAVTYEAKVIGIDSEGHSPKYMVHYTGWNTRYDEWIPPQRIAENLSATTKTKRLKQGTAPVPKPTASTSSSTPTPTTSKIPSKRGRGMSITGKSSATEPPRSTTPSSITSSSSRTKSPATPAAVRNGRLTRQGDHSRRTRRISVQTDVSVQSDSDSEGSESESEQSRTRSGTKSEDNEGKPIRKKLTKTKGEKRKEDDDTEKEEETEKPRKTPRKLKKSLEPKPADESDDDTMHLPKGRDFDLNQIRSELKGITKLKMHSTESSEKDTISSDDSTNILDIKSAPEEIEEQKEKHAESTSSSEDIYEFKEPEPFEFESHKIVDDKNKKRFVPRILDNVEKSPKKKSPKSSVKRENEDKKKFKCLSSTKKEDEDEVDKEIKLEEIEDPFDKLVESPSFHIGKSATEKSDEYKKVSKLNLDIPLVLFKELPLTMDDVSDERLDISDNDDPPNEPLFTHKEQLFTSAAFSKTSPSSNIDSDCVGFTTLKSDDRKPTTSDDEDLLETTRKCVLSFDNDSNDALLINHPCITYEASKSSDLLSKTITLNTVESEDESKTSETFVDNKDTEEKIASLSKQIAPVFQESDSTLLKDLYAPQFSSKSDSLKDITVKTGTRIADSILQKFNMIKNKDPTSPVKHEQTAKRGETSIQTREEVITEIKIEEDEEAEIKEVLEKGNEIKVKSPDVKLKIPSPKEKMVEAKVKSVEKVKELDLKKRVTRKIVSKEFIEESDTDSSDSDERLIMDEDSQTNMSLDLKPDTKEGDSESASYTKTEEQIEIEEEPQRNFKFDPIPQNQDTNSKQEIKMDAESVKEEEPESHSLLWCEETIPGSPAPATSEHEMKPKKNELEMPFASMPCSSTNTKNLLSEIKTTNKERIIPPPIAINMDNQENRDASSAVLDNTPPTTPESTLSNLSPRGENGDLSPNTADNDSCKSTEADIDYPNLRRSSSNKVSPYSEEDTLMNSESGSASKKGIDDIVPSPCKKRRRSCKGDDLPAKRGRKPNRSRHNSDSDDTSEHSVQGSTNISLINNLDTRLARSPRPSKYNFYVEFDPSLDSAQRIAVLQQKLTELRKTYANVKAELAAIERRRKKIRRREREAKANKQEMACT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01252515;
90% Identity
-
80% Identity
-