Basic Information

Insect: Thyatira batis
Gene Symbol: -
Assembly: GCA_905147785.1
Location: LR990489.1:8415515-8423760[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 23 0.0058 0.43 11.6 1.1 3 23 675 696 674 696 0.96

2 23 0.22 16 6.6 0.3 1 22 1075 1096 1075 1096 0.95

3 23 6.9 5.2e+02 1.9 0.3 1 22 1138 1159 1138 1161 0.82

4 23 0.003 0.22 12.5 0.8 3 21 1172 1190 1170 1191 0.94

5 23 0.29 22 6.3 0.1 3 23 1200 1221 1198 1221 0.89

6 23 0.0062 0.46 11.5 0.1 3 23 1242 1263 1240 1263 0.96

7 23 0.037 2.7 9.1 4.2 1 23 1269 1292 1269 1292 0.93

8 23 0.13 9.7 7.3 0.0 1 23 1318 1341 1318 1341 0.90

9 23 0.019 1.5 9.9 3.4 1 23 1346 1368 1346 1368 0.97

10 23 0.011 0.82 10.7 0.3 1 23 1374 1397 1374 1397 0.95

11 23 0.0043 0.32 12.0 1.3 1 23 1410 1432 1410 1432 0.97

12 23 0.0015 0.11 13.4 4.0 1 23 1480 1503 1480 1503 0.96

13 23 0.0043 0.32 12.0 1.1 1 23 1563 1586 1563 1586 0.96

14 23 0.0069 0.52 11.3 2.9 2 23 1613 1635 1612 1635 0.95

15 23 0.26 20 6.4 0.1 2 23 1641 1663 1640 1663 0.93

16 23 0.01 0.77 10.8 0.2 1 21 1707 1727 1707 1728 0.95

17 23 0.0013 0.095 13.7 0.6 1 23 1738 1760 1738 1760 0.93

18 23 0.00012 0.0087 16.9 0.3 2 23 1849 1871 1849 1871 0.93

19 23 3.4e-07 2.6e-05 24.9 1.4 3 23 1878 1898 1877 1898 0.98

20 23 0.0094 0.71 10.9 0.8 1 23 1917 1939 1917 1940 0.95

21 23 0.15 11 7.2 0.0 1 23 1961 1983 1961 1983 0.98

22 23 0.028 2.1 9.4 0.6 1 23 1989 2012 1989 2012 0.95

23 23 0.00026 0.02 15.8 0.4 1 23 2020 2043 2020 2043 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	23	0.0058	0.43	11.6	1.1	3	23	675	696	674	696	0.96
2	23	0.22	16	6.6	0.3	1	22	1075	1096	1075	1096	0.95
3	23	6.9	5.2e+02	1.9	0.3	1	22	1138	1159	1138	1161	0.82
4	23	0.003	0.22	12.5	0.8	3	21	1172	1190	1170	1191	0.94
5	23	0.29	22	6.3	0.1	3	23	1200	1221	1198	1221	0.89
6	23	0.0062	0.46	11.5	0.1	3	23	1242	1263	1240	1263	0.96
7	23	0.037	2.7	9.1	4.2	1	23	1269	1292	1269	1292	0.93
8	23	0.13	9.7	7.3	0.0	1	23	1318	1341	1318	1341	0.90
9	23	0.019	1.5	9.9	3.4	1	23	1346	1368	1346	1368	0.97
10	23	0.011	0.82	10.7	0.3	1	23	1374	1397	1374	1397	0.95
11	23	0.0043	0.32	12.0	1.3	1	23	1410	1432	1410	1432	0.97
12	23	0.0015	0.11	13.4	4.0	1	23	1480	1503	1480	1503	0.96
13	23	0.0043	0.32	12.0	1.1	1	23	1563	1586	1563	1586	0.96
14	23	0.0069	0.52	11.3	2.9	2	23	1613	1635	1612	1635	0.95
15	23	0.26	20	6.4	0.1	2	23	1641	1663	1640	1663	0.93
16	23	0.01	0.77	10.8	0.2	1	21	1707	1727	1707	1728	0.95
17	23	0.0013	0.095	13.7	0.6	1	23	1738	1760	1738	1760	0.93
18	23	0.00012	0.0087	16.9	0.3	2	23	1849	1871	1849	1871	0.93
19	23	3.4e-07	2.6e-05	24.9	1.4	3	23	1878	1898	1877	1898	0.98
20	23	0.0094	0.71	10.9	0.8	1	23	1917	1939	1917	1940	0.95
21	23	0.15	11	7.2	0.0	1	23	1961	1983	1961	1983	0.98
22	23	0.028	2.1	9.4	0.6	1	23	1989	2012	1989	2012	0.95
23	23	0.00026	0.02	15.8	0.4	1	23	2020	2043	2020	2043	0.96

Sequence Information

Coding Sequence: ATGAATGTGAACTATGATCGTGTTTGTAGACTGTGCTTGTCATCTCGAAGTGAATTACTGCCGATTTTTCCTACCACCAGTTCGGATGACTCGGAACCTCCCGTCCTCGCTTCTAAAATCAAGGACTGTGTGTCCGTTGAGATAAACGAAAATGACGAACTGCCGACAAATGTCTGCAAGAAATGTGTGGACAATGTCAACAACTGGCATGTATTCAAGACTGTATGTGAAAGGACTCAGGACAAACTACAGTCCTTGATAAAAAAAGATGGCAGCCAACTAGAAGAGGAGGTTAACATCAAAAGTGAACCATTGTCTGATGAGGTATATGATGATGGTGTGGTTATTGATGGATCATATTCCTTTGAGAATGCGGGCTCTTCAAGCAAGATACAGCCAGAAGGGCCACCAATCTTGGCTTCACTGGGGCTCACACCGAGGAGTGATAAGAATAATGTAGATCCAAGAATGGATTGGCATCGGGTCCATGCAATTTTGGACTTGGTTCAAGATGATGAAGTCATTGACTCACTACAGTTGAAAGAAGAGTGTGATGTTCTTCACCACTCGGATCATGATTCTGAGATAGAGGCTGATCTCCAAACTGATATTGACCATGGTCTAACTGACAGCACTAATGGATATAAATGTCGAAACAAGAAAATAATTTCAAAGGATCCCAAAGTGCCAGTGTCACTCAATAATGCAAAGGCTAAAGAAGTTCTCACACTAAGAAAACGCAAGGCTGATGTACGGAGAGATTGCCCTCGACCTAAAAATGCTTGGCAACTTTTGTTTACTGACGATCTACTAGAACTCATTGTGGCTTCAACTAATGAGAACATAATAAAGAGTGGGAGAGGTTATTCTGATTCTACTAATGTTAGTGAAATAAAAACTCTTATAGGCATTCTTTACTTACACGGCATAATGAGGCCAACCCATCAAAAATCTAGCGACCTCTGGAACAATGATTGTGGTATACCATGTGTAAGAATCGCTATGAAGTATGAACGCTTTAATTTTCTCCTTCAGTACATAAGCTTTGATAAAGATGACGATGATAACATTATACAGTTTGATATAATGAGACGAATACGTAAAGTATTTGAAATATTTGCCATGAATTGCAGAACATCATTTGAAGTTGAGAATTATGTTGTGATTGATGAGATTATAGTGCCAGTATATGGGCCTTGTCCATTCCGATACGATATTGATAAGAAACCATTGAAACGTGGTATAAAAGTAGTATTATTGGTTGATTCTTCGAATTTCTATGTGAGCAATATTGACGTGATAACTGACCCTTATTTCGGACCTGAAGCGATTGTTAAAAAAATAACACAACATCTGGCTGGTTCTGGGAAGACCATCATAATGGATAGTTGGTTTACATCACGCTCACTGATTGATAGTCTTAAAAAAGAATACCAGCTTTATACTATTGCAGCTTTGAAACCGAACAATGAGAATATACCACCATTGTTTCTTTCTCATTACAGAAAAAGTCAAATGTACATGTCTGGGTTTTTAGATACTGATGTATCATTGACTTCTTATGTGAGTTCGGAGAATTCTAAATCAATAAACATAGTCACCAATGAGCCAAAATACTATAAGAAAGGTCATACAAACCGAACAACTGTAGTGTCAGTATTTAAGAAAAATCAGTCCACAGTTGAAGTCAGTGATGTACTTATGCATTACTACACAACTATGCAGCATACAAATGATTGGACCCTCTCATTATTTTTTACACTACTTAACATTGCCTCTGTGAACGCTCAGGTTTTGTGGAGTTCCCATAATTCTACCAATGTGATTCAGCGTCGTTTATTTATCAAGGAATTGGGAGGTGTGGAAAGTGAGAAAGATGAAGAGGATGACGAAGAAATGAACGAGTCCATAGAGCCGTATGCGAAAGTGCCCAACATGCCAGAGGTGTCAATCACAGTAATGCGTCCCTCGGGTGAGACTCTCCACGCCCGGCAAGGTATTCAACAGTTGGCTTCCAAAGATTGTCTGGTTTGCGGTCGCACTTACAGATATTCCCACAACGCTAGGCGTCATGAGCTCACTGCTCACAGCTTTGACAGGTACACAAACAAAATCACATCTAAAAAGTCACATTCTCATATGCAACCGAAGCTGCGGCCAAACCCGTTTAATCCGAAAGCCAGATTGATGCCTAATCCTATTAGCCACAAAATGCAGTTTATGCCCAAAATCATTCCATCGAAAGCAATGCAACATAAAATTATCGCCCCACCGAAGCCTATTCCTATTAAGTCATCAAAAACTCCACAAAATAATTTACCTTATCCTTTGCGTATCAAAGCGCTTAAAGACCTACAAATAAAAAAAAAGGAGCCTCAAATTTTAAAAACTCTTCTCACGTCGAAACCAGAGATCTTGGTTTCGGAACCTGAAATTGTAAATTCTGGCCCCGAAAGCCCTGAGACGTTAATTTCCGAGCCCGAAATTGCCTCTTTCCAAGTAGAGGCTATTCTGTCCGAACCCGACGGTTACGAACCACAAGGTGACGATGAAATGGATGGCGAAATGCAAAATAGTCAGGGTCATCCCTATGATACTGTTGATATGGAATCTGATAATGAAATTGAAATTGCCCGGCAACAAGGTCTTGAGGATGGTGGTGAAAATGAGGATCACAACGATATTGAAGAAAATCCTCATGATGATGACGACAATATTGTGGGAGGACAAAGTGACAATGAAGTAGATCATAATGAGGACACAGCTGAGAGTCAAGAACATATGGATGACGATAACAACGGTGAACTAAAAGTTGTAGATGAGGATAAGGATGGTGAAGAGGGTAACGATGATGGAGAACATGAACCACAACAAATAGATAACGATGAAGACGATGATGATGACCTCCCTCCACTCGGTCTTGCTCCAGTGGTTGAAATAAATGAAGATATGCAAGTCAACTCCTTTAACAGCGAAATTAATGACGAAGACGAGGAACTTGATGAAACAGTGGATCCTGATGACACTGTAGATGCTGATGTAGAAAAAGAACTAGATCCTGACAAATTATATGTCACTAAGACTCAAAGAGACTTCATCCACAAGTATCGTGACATTATCGAACAGATAAACACAAAACGTTGTCTTTGCTGCGACAAAGAGCATCCTCGCCGTAAAGCCGTCATACAACATTTACAGAAAAATGGACACAAGGTCCCGAAGCATACGTGTTATAATTGCGTAATCACGTTCGGACATATTGGTGCTTTACTTAGCCATATGAGGTCCAACTCTTGCACAGACTTGTGGAAAATTATTTACAACGAGAACGGCATTACAGATGATTTAGTTCTCGAAGACGAACCTAAAGACCCTAAGGTACAATACAAAGATATTTTCAATGCTAGATCTTATGCTTGCAAACTGTGTCCGGCGAAGTTCCAGCTCAAACAATTTATAATGAAGCATGTTTTGGATGTCCACGAGGACGGGCAATCTAGAGTACCGCTCGCGTGTGTGCATTGCCGTGCTAGGTATAAAGATAAAAGTTTATTAAAGAAACATATTCGCAACGGCGAATGCACAGTTTACATCGCTTGCGATTTATGTTCGGAAAAGTTTCGTAACATGCAAGATTTCAATGATCACGCATTAGCTATTCACGCCGGCAGCTTCGACCAGTCTGATAATCAAAGTAAATGTGTCGACGGTCGTCCTACCGACTGTCCAATATGTGGAAAGAAGAATAGCAGTTACCCAAATTTGGTTAAACATTTAAAGATTATTCATAGCGAAGAAAAACCACATTATTGTCAACATTGCGATTCCAAGTTTGAGCAAACTGCTGATCTTAACAAGCACATCTATTTGAAACACTCCGACAGAACTTTAGGAATGCAATCATCGGAACCTGACATGTCGCTTGTCAAAGAAGAAGCCGAAGAATATCACTATTCGTGTACGGAATGTAATGCTATATTTGAGACCGTCGATGCATGGACAGATCACCAGGTGGCCGAACATAATCAAGTGGCACATCACTGCGATCAGTGTGAGAAAAAGTTTTTGCGCCCCTCGGAGCTTGCTGAACATAAAAATACTCATTTGCGTGTTAAATTCTATCCCTGCAGCATTTGTTCAAATTCGTACAGCACTCCCCAGAAACTAAGCGAGCATGTACAACAGAGTCATCCCGGCGCCGGTGCCAACGCGTCTGCTGAAACTGAATTCTTTTGCGATGTATGTATCAGATCATTTAAAAGTCGTCAAGCTTATTCAAATCATATGCGTATACACGCTAAAGTTCCTACCACGAACAGAAAACCGGGAACGAAAGGTTTTCCCCCGCAAATTATCGGTAAACCAATCAAACAAATTTCCATGGTTCAGCCTGGAGTTGTCTCATTTAATCCAAATATTAATGTTCCTAATGCTCCATATTGCTGTGATATATGTGGCAAAGGTTTTATGCATAAGAAGAATATATGGAAACATAAGAAAGTTCTGCATGCTGATATTCTTAACGATAGAAATGATAGTGAAGAGAACACTATGCAAGCGTCTACTGAAGATGATGATTACAATGTAGATGAAAATGGTGCTCTACTCTCAACTCCCCAATTCGACAGTTTCAACTTCACAAACTTTACTAATAATGTACAACAAACGCCACAGGACCCCATGCCGTTCTCATGTGAAATATGTTTAAAGAAATTCCCGCTTAGGACGAGTTTGTGGAAACATAAACGCGCTAAACATGGAATTATCAATGCCAGCGCCGGAAGCAGCAACGAAACTCAAACTCAACCGGCTTCCGGAGAAAGCAGTAGTAGGTCTAGCTGTACTATCTGTAAAATTAATTTCTCTGATAAAAAGTCATATTACCGCCATAGAAAGAATTTTCACAAATCCTCCGTACAGATGTGTAAACTATGTGGAAAGCCTCTTAACTCTACATTAGAGCTCTACGAACATCTTAAAGCTGCACATGCTCGAGAGTTACTTGGCTATAATGACCATCAAGGCTCTAGCAAGTCGCAGGAAATAACCCCAGATTTGGAGATAGAATATGATAATGATCAAGAGACAGCCGATCCTAGTGTGGATTACCAAGCTCGTTATCCTTGCGATACCTGTGGCAAGCAATTTGTTGGGTTGCTCGCTTTGCAGAATCATCAGTGCATAAATCAGAATTCGTCACAGCCACAAACGTTCGACTGTGAAATCTGCCATAAGAGTTACACATCTATAGCGGCATTGAAAAGTCATCGCGGATGGCACTTGCGATCGCCTGATGGTAAAGCTGCTGCGAACAACAGCGGACTTTGGATGCCTCAGCACAAGGTGACGAGCAAAGTAAGCAAGCACGAAGTTGTTGACCCTGTGCAATTGGCTAGAGTTCAACATTCGGCACCCGCTGCTGCTGTAGTGAAAAGGAGATTACCACCAGAAGTTGAAGTAACAGTTGTTAATCCTAATAAAAAAATGCGTTCTGATGATTCTGTCGAAATGGACCCAATGGCTTCTGGCCCACTTGAGGATAGATATTGTACTATTTGTGACAAAGAATTTACCAAACGCGCAGCTTATCAACGCCATATGGACGAAGTGCACCAACCGAACTCTGTTTTTTGTCCGGTATGCGATAAGAGTTTTACAAGAAAATCAACGCTTCTCGTTCATATGAAGAAGCATTACGAAAGTGGAGAGAGTAGTTCAGCCGCAGTCGCACAGTTAGAAGAGGATACTTTCTCGTGCGATCTATGTGGCGCACAGTATGATAACGCTAAAGCCCTCAGGTCCCATCGTGTGAAGCATCACGGTGAAGAGTCCGGAGATTCTGACGACGACGGCAGCGTGCCCATCGCCCAGCCTGGCGAGTTCACGTGCGCACAGTGTGGAGACGGAGTGGCTACACCTCGCGATTTGATCGCCCACCGATCTATGCACGCAACACCAACAAAATTCTTTTGTAATATATGCAAAGTGTACTTCGCGCGGGCCCTTGATTTGTCCTCGCACACCCGGGCGAGACACGCTGACAACGAAAAGGTTTTCTTCCCCTGTGCCATGTGCGACCGGTTCTACATGAACAAGAAGAGTTTACAGCGACACATTGAAATGGCGCACTGA
Protein Sequence: MNVNYDRVCRLCLSSRSELLPIFPTTSSDDSEPPVLASKIKDCVSVEINENDELPTNVCKKCVDNVNNWHVFKTVCERTQDKLQSLIKKDGSQLEEEVNIKSEPLSDEVYDDGVVIDGSYSFENAGSSSKIQPEGPPILASLGLTPRSDKNNVDPRMDWHRVHAILDLVQDDEVIDSLQLKEECDVLHHSDHDSEIEADLQTDIDHGLTDSTNGYKCRNKKIISKDPKVPVSLNNAKAKEVLTLRKRKADVRRDCPRPKNAWQLLFTDDLLELIVASTNENIIKSGRGYSDSTNVSEIKTLIGILYLHGIMRPTHQKSSDLWNNDCGIPCVRIAMKYERFNFLLQYISFDKDDDDNIIQFDIMRRIRKVFEIFAMNCRTSFEVENYVVIDEIIVPVYGPCPFRYDIDKKPLKRGIKVVLLVDSSNFYVSNIDVITDPYFGPEAIVKKITQHLAGSGKTIIMDSWFTSRSLIDSLKKEYQLYTIAALKPNNENIPPLFLSHYRKSQMYMSGFLDTDVSLTSYVSSENSKSINIVTNEPKYYKKGHTNRTTVVSVFKKNQSTVEVSDVLMHYYTTMQHTNDWTLSLFFTLLNIASVNAQVLWSSHNSTNVIQRRLFIKELGGVESEKDEEDDEEMNESIEPYAKVPNMPEVSITVMRPSGETLHARQGIQQLASKDCLVCGRTYRYSHNARRHELTAHSFDRYTNKITSKKSHSHMQPKLRPNPFNPKARLMPNPISHKMQFMPKIIPSKAMQHKIIAPPKPIPIKSSKTPQNNLPYPLRIKALKDLQIKKKEPQILKTLLTSKPEILVSEPEIVNSGPESPETLISEPEIASFQVEAILSEPDGYEPQGDDEMDGEMQNSQGHPYDTVDMESDNEIEIARQQGLEDGGENEDHNDIEENPHDDDDNIVGGQSDNEVDHNEDTAESQEHMDDDNNGELKVVDEDKDGEEGNDDGEHEPQQIDNDEDDDDDLPPLGLAPVVEINEDMQVNSFNSEINDEDEELDETVDPDDTVDADVEKELDPDKLYVTKTQRDFIHKYRDIIEQINTKRCLCCDKEHPRRKAVIQHLQKNGHKVPKHTCYNCVITFGHIGALLSHMRSNSCTDLWKIIYNENGITDDLVLEDEPKDPKVQYKDIFNARSYACKLCPAKFQLKQFIMKHVLDVHEDGQSRVPLACVHCRARYKDKSLLKKHIRNGECTVYIACDLCSEKFRNMQDFNDHALAIHAGSFDQSDNQSKCVDGRPTDCPICGKKNSSYPNLVKHLKIIHSEEKPHYCQHCDSKFEQTADLNKHIYLKHSDRTLGMQSSEPDMSLVKEEAEEYHYSCTECNAIFETVDAWTDHQVAEHNQVAHHCDQCEKKFLRPSELAEHKNTHLRVKFYPCSICSNSYSTPQKLSEHVQQSHPGAGANASAETEFFCDVCIRSFKSRQAYSNHMRIHAKVPTTNRKPGTKGFPPQIIGKPIKQISMVQPGVVSFNPNINVPNAPYCCDICGKGFMHKKNIWKHKKVLHADILNDRNDSEENTMQASTEDDDYNVDENGALLSTPQFDSFNFTNFTNNVQQTPQDPMPFSCEICLKKFPLRTSLWKHKRAKHGIINASAGSSNETQTQPASGESSSRSSCTICKINFSDKKSYYRHRKNFHKSSVQMCKLCGKPLNSTLELYEHLKAAHARELLGYNDHQGSSKSQEITPDLEIEYDNDQETADPSVDYQARYPCDTCGKQFVGLLALQNHQCINQNSSQPQTFDCEICHKSYTSIAALKSHRGWHLRSPDGKAAANNSGLWMPQHKVTSKVSKHEVVDPVQLARVQHSAPAAAVVKRRLPPEVEVTVVNPNKKMRSDDSVEMDPMASGPLEDRYCTICDKEFTKRAAYQRHMDEVHQPNSVFCPVCDKSFTRKSTLLVHMKKHYESGESSSAAVAQLEEDTFSCDLCGAQYDNAKALRSHRVKHHGEESGDSDDDGSVPIAQPGEFTCAQCGDGVATPRDLIAHRSMHATPTKFFCNICKVYFARALDLSSHTRARHADNEKVFFPCAMCDRFYMNKKSLQRHIEMAH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01417045;
90% Identity: iTF_01252039;
80% Identity: -