Basic Information

Insect: Polyplax serrata
Gene Symbol: -
Assembly: GCA_037055365.1
Location: JAWJWE010000002.1:12158957-12166620[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 26 0.0052 0.3 11.1 2.8 1 23 425 447 425 447 0.98

2 26 0.026 1.5 8.9 4.0 1 20 453 472 453 475 0.93

3 26 1.6e-05 0.0009 19.0 1.2 1 23 481 503 481 503 0.98

4 26 0.00046 0.027 14.4 3.6 1 21 509 529 509 531 0.96

5 26 4.3e-06 0.00025 20.8 5.6 1 23 537 559 537 559 0.99

6 26 2.5e-05 0.0015 18.4 5.3 1 23 565 587 565 587 0.97

7 26 2.1e-06 0.00012 21.8 7.0 1 23 593 615 593 615 0.97

8 26 1.3e-07 7.7e-06 25.5 1.9 1 23 621 643 621 643 0.98

9 26 6.9e-05 0.004 17.0 6.7 1 23 649 671 649 671 0.97

10 26 7.9e-06 0.00046 20.0 5.6 1 23 677 699 677 699 0.97

11 26 1.6e-06 9.1e-05 22.2 2.5 1 23 705 727 705 727 0.98

12 26 5.6e-06 0.00032 20.4 6.0 1 23 733 755 733 755 0.98

13 26 7.3e-08 4.2e-06 26.4 3.1 1 23 761 783 761 783 0.98

14 26 3.4e-07 2e-05 24.2 3.9 1 23 789 811 789 811 0.98

15 26 1.6e-07 9.2e-06 25.3 4.2 1 23 817 839 817 839 0.98

16 26 1.1e-06 6.2e-05 22.7 7.8 1 23 845 867 845 867 0.98

17 26 5.5e-07 3.2e-05 23.6 4.0 1 23 873 895 873 895 0.98

18 26 8.1e-06 0.00047 19.9 5.9 1 23 901 923 901 923 0.98

19 26 7e-06 0.0004 20.1 5.7 1 23 929 951 929 951 0.98

20 26 8.5e-06 0.00049 19.8 7.8 1 23 957 979 957 979 0.98

21 26 7.5e-05 0.0044 16.9 8.1 1 23 985 1007 985 1007 0.98

22 26 1.3e-05 0.00076 19.3 7.5 1 23 1013 1035 1013 1035 0.98

23 26 0.00099 0.058 13.3 8.8 1 21 1041 1061 1041 1063 0.94

24 26 7.1e-05 0.0041 16.9 0.3 1 23 1069 1091 1069 1091 0.98

25 26 0.006 0.35 10.9 3.9 1 23 1101 1123 1101 1123 0.98

26 26 1.2e-07 7e-06 25.7 1.0 1 23 1129 1151 1129 1151 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	26	0.0052	0.3	11.1	2.8	1	23	425	447	425	447	0.98
2	26	0.026	1.5	8.9	4.0	1	20	453	472	453	475	0.93
3	26	1.6e-05	0.0009	19.0	1.2	1	23	481	503	481	503	0.98
4	26	0.00046	0.027	14.4	3.6	1	21	509	529	509	531	0.96
5	26	4.3e-06	0.00025	20.8	5.6	1	23	537	559	537	559	0.99
6	26	2.5e-05	0.0015	18.4	5.3	1	23	565	587	565	587	0.97
7	26	2.1e-06	0.00012	21.8	7.0	1	23	593	615	593	615	0.97
8	26	1.3e-07	7.7e-06	25.5	1.9	1	23	621	643	621	643	0.98
9	26	6.9e-05	0.004	17.0	6.7	1	23	649	671	649	671	0.97
10	26	7.9e-06	0.00046	20.0	5.6	1	23	677	699	677	699	0.97
11	26	1.6e-06	9.1e-05	22.2	2.5	1	23	705	727	705	727	0.98
12	26	5.6e-06	0.00032	20.4	6.0	1	23	733	755	733	755	0.98
13	26	7.3e-08	4.2e-06	26.4	3.1	1	23	761	783	761	783	0.98
14	26	3.4e-07	2e-05	24.2	3.9	1	23	789	811	789	811	0.98
15	26	1.6e-07	9.2e-06	25.3	4.2	1	23	817	839	817	839	0.98
16	26	1.1e-06	6.2e-05	22.7	7.8	1	23	845	867	845	867	0.98
17	26	5.5e-07	3.2e-05	23.6	4.0	1	23	873	895	873	895	0.98
18	26	8.1e-06	0.00047	19.9	5.9	1	23	901	923	901	923	0.98
19	26	7e-06	0.0004	20.1	5.7	1	23	929	951	929	951	0.98
20	26	8.5e-06	0.00049	19.8	7.8	1	23	957	979	957	979	0.98
21	26	7.5e-05	0.0044	16.9	8.1	1	23	985	1007	985	1007	0.98
22	26	1.3e-05	0.00076	19.3	7.5	1	23	1013	1035	1013	1035	0.98
23	26	0.00099	0.058	13.3	8.8	1	21	1041	1061	1041	1063	0.94
24	26	7.1e-05	0.0041	16.9	0.3	1	23	1069	1091	1069	1091	0.98
25	26	0.006	0.35	10.9	3.9	1	23	1101	1123	1101	1123	0.98
26	26	1.2e-07	7e-06	25.7	1.0	1	23	1129	1151	1129	1151	0.97

Sequence Information

Coding Sequence: ATGAATAGTGAGCAAGCGACAGCCATGTCAGTATCTGTCTCTAGTGCCTCTGCATGTTCTGGAACTGAGgaaagtaatattgttttacaaaGACCTTCTGGATCAGCTGCTGCTGCGGCGGCTGCAGCTGCTGCCGATCTTCGTGTTGGTACTGTAGCTTTATCTAACGTTGCAAAGTATTGGGTGTTGACAAACCTATTTCCGGGTCCAATACCTCAAGCAGTGTATCTTAATCATCCTCCAGGTCGCGTGGGGGATATTAAACAAGAAATTGATCTTACTCAACAAGTTGTTCCGACAACAATGGAAGGCATGACATTGCTTCACCAATCTACTCATTCCCAAGCACAGATCCCAGTGAGTGGAGTTCAAGCTTCAATTACATCTAATGGTGTAGGAACTTTGCCACTTCCATCAGtctcttcctcttctcctATGGAAGTCAGTTTACAGGGGCAACAACCTGGTCAAccagaaaaggaaacaaaattggaCAGGGGAACATGTGTCACTGAGAGAGTCAGCGATAGCCAGGTTCATTGCCAAGTTCAATGCGATATTCCTTCTGTGAGTGGAGTGCAAATGCCACAGAATAGTCAACAAACTCATCAACAGGCACAACAAGGCCAACAAATGTCACAATCTCAAACTCAAAATCAATCTGTCCAACCGCAAATGATTcaccaacagcaacaacagcagccaCAAGCGCAGCCTCCTACGCAACAGTCGGCACCACCACCGGCTCAACATCAACCTCAATCTTCATCACAACAACCTTCTCAACCATCCCAATCTCAACAAAATGTGTCCTCCCATCATGGGGTGGAATCAAGTGCAGGAAGTGGAAATCACATGGAGGAGGGTATGAACTgtcaggaaataaaattagcaGGTCAAATGGTCACTTctcaagaaataaaagatgaGAATAAAGAGATAGCTTGCAATGTCAAAGATAATCGTCTGATAATGACAGGGTTCCCAATGCAAGATGTCAAGGGTCATATGATGGACATCCGCACTTCGGATGGTGTCGTCAAAATCACAACGGATCAAGATGTCGCCAAGACATTACTTAATGCCGACATGGTCCAAAGCATGTATAaggttaATGTGGAGGACATCAATCAACTTTTGGCATATCACGAAGTTTTTGGCAAATTGTCCACGGACTCTTTGGTACCCGTGCAACAGAACGGTAATAAAGTGCAAGAAGGAAGCGGTTCAGTGCCGGCAGGTGCTCCTAGCAGCCCTACATCCGTCGGCCCCTACTCATGCGACATTTGCtgcaaaatatttccttttcgGTATCAATTGATTGTCCACCGACGGTATCACACCGAGAGAAAACCATTCACCTGTCAGGTTTGTGGGAAGGCGTTCACATGCTCTGCCGAACTAAGTCGTCACGGCAAGTGCCATCTGGGAGGCAGCATGTTTACTTGTTCAGTTTGTTTCCATGTCTTTGCGAACGCTCCATCGCTTGAAAGGCACATGAAGCGTCACGCGACCGATAAACCCTACGTTTGTACGACTTGCGCGAAAAGTTTTGCAAGAAAAGAGCACTTAGATAATCACATAAGGTGTCATACGGGCGAGACACCCTATCGgtgtCAGTACTGCAACAAAACCTTTACGCGTAAGGAGCATATGGTTAACCATGTTCGTAAACATACAGGGGAAACTCCCCATCGTTGTGATATATGTAAGAAGAGTTTCACCAGAAAGGAACATTTTATGAATCATGTAATGTGGCATACTGGCGAGACTCCCCATTCTTGCCATgtctGCGGCAAAAAGTACACGAGAAAAGAGCATTTAGCCAACCATATGCGTTCACACACAAATGACACACCTTTCCGGTGTGAGATATGTGGAAAAGCTTTCACGAGAAAAGAACATTTTACAAATCACATTATGTGGCATACGGGCGAGACACCCCATAGGTGCGATTTCTGCTCTAAAACATTCACAAGGAAGGAGCATTTATTGAACCACGTTCGACAGCACACAGGGGAATCTCCTCACAGATGCGGgtattgCAGTAAATCGTTTACGCGAAAGGAGCACCTTATTAACCACGTGAGGCAGCACACAGGGGAAACACCGTTCCGTTGTGAATTTTGCCCGAAAGCATTTACTAGAAAAGACCATTTAGTTAACCACGTTAGACAACACACAGGGGAAACCCCACACAAATGTCAATATTGTTCAAAAGAATTTGCCCGCAAAGATCATTTAACGAATCACATACGTCAACACACGGGCGAAACTCCGTATCGATGTACTTATTGTCCCAAGGCTTTTACTCGGAAGGATCATCTAAACGAGCATATACGACAGCACACAGgtGAAACTCCTTACAAATGTCAATACTGCCCTAAAGAATTTTCAAGAAAGGATCACCTCAATAATCATGTGCGCCAGCATACGGGAGAAACTCCGTTTAAGTGCCAGTACTGTCCGAAAGAATTTTCAAGAAAAGATCACCTGACGAACCATATCCGGCAACACACAGgCGAAACCCCCTTCAAATGCGATTACTGtccgaaatgtttttcaagGAAAGACCACCTGACGAATCATACAAGGCAGCACACCGGGGAAACTCCTTTTAAATGCCAATATTGTCCGAAAGCTTTTTCAAGAAAAGATCATTTGAATGATCACACACGTCAGCACACAGgGGAAACACCATACAAATGCGTGTACTGTAGCAAACAATTCAGCCGGAAGGATCATTTAACCAATCATACCCGACAGCACACTGGCGAGACGCCTTTCAAGTGCGAATTTTGTCCTAAAGCGTTCAGTAGAAAAGACCACTTAACTGAACATACGCGTCATCACACTGGTGAATCGCCACACAAATGCCAGTATTGTACCAAATCGTTCACCAGAAAGGAACATTTGACCAATCATGTTCGACAGCACACCGGTGAGTCTCCCCATCGGTGTCACTTTTGCGCGAAGACATTCACCAGGAAGGAACATTTGAATAATCACGTGAGAATACACACGGGTGATTCGCCACATCGCTGCGAGTTCTGTCAGAAGAGTTTCACTAGAAAGGAACATCTGACGAACCACTTGAGGCAGCATTCGGGAGAGACGCCTCACTGTTGCAATGTCTGCAGCAAACCTTTCACACGAAAGgAACACTTAATAAATCACATGAGGTGTCACACTGGCGAACGACCTTTCGTTTGCGGCGAGtgtggaaaaagttttccgcTGAAAGGGAACCTTCTGTTCCATCAAAGATCTCACAATAAGGGAGCGGCTGCTGACAGACCGTTCCGCTGCGACTTGTGCCCGAAAGATTTCACATGCAAggGACATTTAGTTTCACATCGTAGAGCACATACCGGTGAGCGTCCACACTCATGTCCGGATTGCGGCAAAACATTCGTCGAAAAGGGAAACCTCTTACGACACGTGCGCAAACACCAGGAGTCAGTTATTGGACATGTTCAGGGTACCGGCGGTGCAGGAAGTGCTGTAATGCCACCTCCATCGGCGCCGCCGCCACTTCCGGTGCTGTCCAATATAACAACGTACACAGCCCAAATTCTTCATCCGACGGTGGTCGTACCCACCCCTAACCCAGCTCTAACGTCTTACTAA
Protein Sequence: MNSEQATAMSVSVSSASACSGTEESNIVLQRPSGSAAAAAAAAAADLRVGTVALSNVAKYWVLTNLFPGPIPQAVYLNHPPGRVGDIKQEIDLTQQVVPTTMEGMTLLHQSTHSQAQIPVSGVQASITSNGVGTLPLPSVSSSSPMEVSLQGQQPGQPEKETKLDRGTCVTERVSDSQVHCQVQCDIPSVSGVQMPQNSQQTHQQAQQGQQMSQSQTQNQSVQPQMIHQQQQQQPQAQPPTQQSAPPPAQHQPQSSSQQPSQPSQSQQNVSSHHGVESSAGSGNHMEEGMNCQEIKLAGQMVTSQEIKDENKEIACNVKDNRLIMTGFPMQDVKGHMMDIRTSDGVVKITTDQDVAKTLLNADMVQSMYKVNVEDINQLLAYHEVFGKLSTDSLVPVQQNGNKVQEGSGSVPAGAPSSPTSVGPYSCDICCKIFPFRYQLIVHRRYHTERKPFTCQVCGKAFTCSAELSRHGKCHLGGSMFTCSVCFHVFANAPSLERHMKRHATDKPYVCTTCAKSFARKEHLDNHIRCHTGETPYRCQYCNKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHFMNHVMWHTGETPHSCHVCGKKYTRKEHLANHMRSHTNDTPFRCEICGKAFTRKEHFTNHIMWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCGYCSKSFTRKEHLINHVRQHTGETPFRCEFCPKAFTRKDHLVNHVRQHTGETPHKCQYCSKEFARKDHLTNHIRQHTGETPYRCTYCPKAFTRKDHLNEHIRQHTGETPYKCQYCPKEFSRKDHLNNHVRQHTGETPFKCQYCPKEFSRKDHLTNHIRQHTGETPFKCDYCPKCFSRKDHLTNHTRQHTGETPFKCQYCPKAFSRKDHLNDHTRQHTGETPYKCVYCSKQFSRKDHLTNHTRQHTGETPFKCEFCPKAFSRKDHLTEHTRHHTGESPHKCQYCTKSFTRKEHLTNHVRQHTGESPHRCHFCAKTFTRKEHLNNHVRIHTGDSPHRCEFCQKSFTRKEHLTNHLRQHSGETPHCCNVCSKPFTRKEHLINHMRCHTGERPFVCGECGKSFPLKGNLLFHQRSHNKGAAADRPFRCDLCPKDFTCKGHLVSHRRAHTGERPHSCPDCGKTFVEKGNLLRHVRKHQESVIGHVQGTGGAGSAVMPPPSAPPPLPVLSNITTYTAQILHPTVVVPTPNPALTSY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01308163; iTF_01308843; iTF_01165040;
90% Identity: iTF_01165040;
80% Identity: -