Basic Information

Insect: Pediculus humanus
Gene Symbol: -
Assembly: GCA_000006295.1
Location: NW:70553-78408[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 26 0.0041 0.27 11.1 2.8 1 23 435 457 435 457 0.98

2 26 0.0079 0.53 10.2 4.1 1 20 463 482 463 485 0.93

3 26 1.2e-05 0.00082 19.0 1.2 1 23 491 513 491 513 0.98

4 26 0.00014 0.0096 15.6 4.6 1 21 519 539 519 541 0.96

5 26 3.4e-06 0.00022 20.8 5.6 1 23 547 569 547 569 0.99

6 26 2e-05 0.0013 18.3 5.3 1 23 575 597 575 597 0.97

7 26 1.2e-06 8e-05 22.2 7.2 1 23 603 625 603 625 0.98

8 26 1e-07 6.9e-06 25.5 1.9 1 23 631 653 631 653 0.98

9 26 5.4e-05 0.0036 17.0 6.7 1 23 659 681 659 681 0.97

10 26 6.2e-06 0.00041 19.9 5.6 1 23 687 709 687 709 0.97

11 26 2.5e-07 1.7e-05 24.3 2.4 1 23 715 737 715 737 0.98

12 26 1.4e-05 0.00094 18.8 6.0 1 23 743 765 743 765 0.98

13 26 1.8e-07 1.2e-05 24.7 3.0 1 23 771 793 771 793 0.98

14 26 2.7e-07 1.8e-05 24.2 3.9 1 23 799 821 799 821 0.98

15 26 1.2e-07 8.3e-06 25.3 4.2 1 23 827 849 827 849 0.98

16 26 9.2e-07 6.1e-05 22.5 7.9 1 23 855 877 855 877 0.98

17 26 4.3e-07 2.9e-05 23.6 4.1 1 23 883 905 883 905 0.98

18 26 5.5e-08 3.7e-06 26.4 4.3 1 23 911 933 911 933 0.99

19 26 1.6e-05 0.001 18.7 4.0 1 23 939 961 939 961 0.98

20 26 6.7e-06 0.00045 19.8 7.8 1 23 967 989 967 989 0.98

21 26 5.9e-05 0.0039 16.9 8.1 1 23 995 1017 995 1017 0.98

22 26 7.9e-06 0.00053 19.6 7.7 1 23 1023 1045 1023 1045 0.98

23 26 0.00078 0.052 13.3 8.8 1 21 1051 1071 1051 1073 0.94

24 26 5.6e-05 0.0037 16.9 0.3 1 23 1079 1101 1079 1101 0.98

25 26 0.0047 0.31 10.9 3.9 1 23 1111 1133 1111 1133 0.98

26 26 9.5e-08 6.4e-06 25.6 1.0 1 23 1139 1161 1139 1161 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	26	0.0041	0.27	11.1	2.8	1	23	435	457	435	457	0.98
2	26	0.0079	0.53	10.2	4.1	1	20	463	482	463	485	0.93
3	26	1.2e-05	0.00082	19.0	1.2	1	23	491	513	491	513	0.98
4	26	0.00014	0.0096	15.6	4.6	1	21	519	539	519	541	0.96
5	26	3.4e-06	0.00022	20.8	5.6	1	23	547	569	547	569	0.99
6	26	2e-05	0.0013	18.3	5.3	1	23	575	597	575	597	0.97
7	26	1.2e-06	8e-05	22.2	7.2	1	23	603	625	603	625	0.98
8	26	1e-07	6.9e-06	25.5	1.9	1	23	631	653	631	653	0.98
9	26	5.4e-05	0.0036	17.0	6.7	1	23	659	681	659	681	0.97
10	26	6.2e-06	0.00041	19.9	5.6	1	23	687	709	687	709	0.97
11	26	2.5e-07	1.7e-05	24.3	2.4	1	23	715	737	715	737	0.98
12	26	1.4e-05	0.00094	18.8	6.0	1	23	743	765	743	765	0.98
13	26	1.8e-07	1.2e-05	24.7	3.0	1	23	771	793	771	793	0.98
14	26	2.7e-07	1.8e-05	24.2	3.9	1	23	799	821	799	821	0.98
15	26	1.2e-07	8.3e-06	25.3	4.2	1	23	827	849	827	849	0.98
16	26	9.2e-07	6.1e-05	22.5	7.9	1	23	855	877	855	877	0.98
17	26	4.3e-07	2.9e-05	23.6	4.1	1	23	883	905	883	905	0.98
18	26	5.5e-08	3.7e-06	26.4	4.3	1	23	911	933	911	933	0.99
19	26	1.6e-05	0.001	18.7	4.0	1	23	939	961	939	961	0.98
20	26	6.7e-06	0.00045	19.8	7.8	1	23	967	989	967	989	0.98
21	26	5.9e-05	0.0039	16.9	8.1	1	23	995	1017	995	1017	0.98
22	26	7.9e-06	0.00053	19.6	7.7	1	23	1023	1045	1023	1045	0.98
23	26	0.00078	0.052	13.3	8.8	1	21	1051	1071	1051	1073	0.94
24	26	5.6e-05	0.0037	16.9	0.3	1	23	1079	1101	1079	1101	0.98
25	26	0.0047	0.31	10.9	3.9	1	23	1111	1133	1111	1133	0.98
26	26	9.5e-08	6.4e-06	25.6	1.0	1	23	1139	1161	1139	1161	0.97

Sequence Information

Coding Sequence: ATGAATAGCGAGCAAGCTACGGCCATGTCAGTATCTGTATCAAGTGCCTCAACATGTTCAGGAACTgaggAAAGTAATATAGTTTTACAAAGACCATCTGGATCTGCTGCTGCTGCGGCGGCTGCAGCTGCTGCCGACCTTCGCGTTGGTACTGTAGCTTTATCTAATGTAGCAAAATATTGGGTGTTGACAAACCTCTTTCCGGGTCCAATACCTCAAGCGGTGTATCTTAATCATCCTCCAGGTCGCGTGGGGGATATAAAACAAGAAATTGATCTTAGTCAACAAGTTGTACCTACAACCATGGAAGGCATGACATTGCTTCACCAATCTACTCATTCCCAAGCACAGATCCCAGTGAGTGCGGTTCAAGCTTCTATTGCATCTAATGGTGTAGGAACTTTACCTCTTCCATCTGTATCTTCTTCTTCGCATATGGAAGTCAGTTTACAAGGCCAGCAGTCTAATCAAtctgaaaaagaaacaaaattggACAGAGGGACTTGCGTGACAGAAAGAGTCAGTGACAATCAGgTTCACTGTCAAGTTCAGTGTGATATACCAAACGTAAGCGGTGTTCAAATTCAACAAGGAAATCAACAAGGCCATCAATCCAATCAACAAAATACTACAATGTCTCAATCTCAAGGGCAAAGTCAACAAGTTCAGCAGCAAATAAATATTCATCAACCTCAGCCCTCATCTTCTCAACATCAATCTCAGTCTTCTGGGCAACAatctcaacaacaacaacagtcacaacaacaacagcaacaaccacaacaacaacaaccacaacagcCACAACCCTCATCTCAGTCAGGGCAACCTCAGCAACAAGTTTCTTCTCATCATTCGGTGGAGTCCAGTGGCAACAGTAGCAGTCATAtagaagaaaatataaattgtcCAGATATAAAACTTTCTGGTCAAATGATTTCGACACAAGATATAAAAGATGAAAACAAAGAAATGGCATGCAACGTAAAAGATAATCGTTTAATTATGACCggtTTTCCCATGCAAGATGTAAAAGGGCACATGATGGATATTAGAACTGCTGATGGAGTAGTTAAAATAACTGCAGATCAAGATGTTGCAAAAACATTACTTAATGCTGATATGGTGCAGAGCATGTACAAGGTGAATGTCGAAGATATCAATCAACTTTTGGCATATCATGAAGTATTTGGTAAATTATCGACTGATCCTTTGGTTCCTGTACAACAAAATGGTAACAAGGTACAGGAGAATAGTGGAACAGTCACTGCCGCTCCAAGCAGTCCAACATCTGTGGGACCTTATTCGTGTGATATCTGCTGCAAAATATTTCCTTTTCGCTATCAGTTAATTGTTCATCGAAGATATCACGCAGAAAGAAAACCTTTCACTTGTcaggTTTGCGGGAAGGCTTTTACATGCTCTGCCGAACTAACTCGTCATGGCAAGTGCCATCTAGGAGGCAGCATGTTTACTTGTTCCGTTTGTTTTCACGTGTTTGCGAACGCTCCATCCCTTGAAAGGCATATGAAGCGTCACGCAACCGATAAACCTTACGTGTGCACAACATGCACGAAAAGTTTTGCTAGAAAAGAACATTTAGATAACCATATAAGATGTCATACAGGCGAGACACCCTATCGgtgTCAATACTGCAATAAAACCTTTACGCGTAAGGAGCATATGGTTAATCACGTTCGAAAGCATACAGGGGAAACTCCCCATCGTTGTGATATATGTAAGAAGAGTTTTACGAGAAAAGAACATTTTATGAATCACGTTATGTGGCACACTGGCGAAACTCCTCATACGTGCCACGTTTgcggaaaaaaatatacgcgAAAGGAGCATTTAGCTAATCACATGCGTTCACACACGAATGACACTCCTTTTCGTTGTGAAATTTGCGGGAAAGCTTTTACAAGAAAGGAACATTTTACAAATCACATTATGTGGCACACAGGAGAAACTCCCCATAGATGCGATTTTTGTTCGAAAACTTTCACGCGAAAAGAGCATTTATTAAACCACGTTCGTCAACATACTGGTGAATCTCCGCATAGATGCGGGTATTGCAGCAAGTCTTTTACAAGAAAAGAACATCTCATTAATCACGTGAGACAACATACGGGTGAGACTCCATTTCGATGCGAATACTGCCCAAAAGCATTTACTAGAAAGGATCACTTAGTTAATCACGTCAGACAACACACAGGGGAAACCCCACACAAATGTCAATATTGTTCTAAAGAATTTGCTCGGAAAGATCATTTAACTAATCACGTTCGGCAACACACTGGGGAAACTCCGTACAGATGTACTTATTGCCCTAAGGCTTTTACTAGGAAGGACCACCTTAACGAACATGTTAGACAGCATACAGgcgaaACTCCTTATAAATGTCAATATTGTCCCAAAGAATTTTCAAGAAAAGATCATTTGAACAATCACGTTCGGCAACATACAGGAGAGACACCCTTTAAGTGCCAGTACTGTCCGAAAGAATTTTCAAGAAAAGATCATCTTACGAATCATATCCGTCAGCATACAGgcGAGACCCCCTTCAAATGCGAATACTGTCCAAAATGTTTTACAAGGAAAGACCATTTGACGAATCATACGAGGCAGCATACCGGGGAAACTCCTTTTAAATGTCAATATTGTCCGAAAGCTTTTTCAAGAAAAGATCATTTGACCGATCATACTCGCCAACACACAGgaGAAACACCTTTCAAATGTGCTTACTGCGGAAAAGAATTCAGTAGGAAGGATCACTTAACAAATCACACACGGACGCACACTGGTGAGCAGCCTTTCAAATGCGATTTTTGTCCTAAAGCATTCGGTAGAAAAGATCACTTAACTGAACATGTGCGCCATCATACCGGCGAATCTCCCCACAAATGTCAGTATTGTACGAAATCATTTACTCGTAAAGAACACTTGACCAATCACGTTAGGCAGCATACTGGTGAGTCTCCACATCGTTGCCATTTTTGCGCTAAAACTTTCACAAGGAaagaacatttaaataatcacgTAAGAATTCATACAGGAGACTCGCCGCACAAATGCGAATTTTGTCAGAAAAGCTTTACTAGAAAAGAGCACCTGACAAACCACTTGCGACAACATTCGGGAGAAACTCCTCATTGTTGTAACGTTTGCAGCAAACCTTTTACAAGaaaggaacatttaattaatcacATGAGGTGTCACACTGGTGAAAGACCATTTGTTTGCGGTGAATGCGGCAAAAGTTTTCCACTGAAAGGAAATCTTTTGTTTCATCAAAGATCTCACAATAAGGGCGCAGCGGCCGATAGACCGTTTAGATGTGATTTGTGCCCGAAAGATTTCACTtgcaaaggacaTTTGGTCTCGCATCGAAGAGCACACACTGGCGAGCGACCTCATTCTTGTCCCGATTGTGGTAAAACATTCGTAGAAAAAGGCAACCTTTTGAGACACGTGAGAAAACACCAGGAATCGGTGATTGGGCACATTCAGGGTAGCGCGAGCGGAGCAAGTGGAGTCATGCCTCCTCCGTCGGCACCCCCGCCCTTACCTGTTTTATCCAGTATAACAACTTACACGACTCAGATACTTCATCCAACCGTTGTAGTACCGACTCCGAACCCGGCCCTGACTTCTTACTAA
Protein Sequence: MNSEQATAMSVSVSSASTCSGTEESNIVLQRPSGSAAAAAAAAAADLRVGTVALSNVAKYWVLTNLFPGPIPQAVYLNHPPGRVGDIKQEIDLSQQVVPTTMEGMTLLHQSTHSQAQIPVSAVQASIASNGVGTLPLPSVSSSSHMEVSLQGQQSNQSEKETKLDRGTCVTERVSDNQVHCQVQCDIPNVSGVQIQQGNQQGHQSNQQNTTMSQSQGQSQQVQQQINIHQPQPSSSQHQSQSSGQQSQQQQQSQQQQQQPQQQQPQQPQPSSQSGQPQQQVSSHHSVESSGNSSSHIEENINCPDIKLSGQMISTQDIKDENKEMACNVKDNRLIMTGFPMQDVKGHMMDIRTADGVVKITADQDVAKTLLNADMVQSMYKVNVEDINQLLAYHEVFGKLSTDPLVPVQQNGNKVQENSGTVTAAPSSPTSVGPYSCDICCKIFPFRYQLIVHRRYHAERKPFTCQVCGKAFTCSAELTRHGKCHLGGSMFTCSVCFHVFANAPSLERHMKRHATDKPYVCTTCTKSFARKEHLDNHIRCHTGETPYRCQYCNKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHFMNHVMWHTGETPHTCHVCGKKYTRKEHLANHMRSHTNDTPFRCEICGKAFTRKEHFTNHIMWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCGYCSKSFTRKEHLINHVRQHTGETPFRCEYCPKAFTRKDHLVNHVRQHTGETPHKCQYCSKEFARKDHLTNHVRQHTGETPYRCTYCPKAFTRKDHLNEHVRQHTGETPYKCQYCPKEFSRKDHLNNHVRQHTGETPFKCQYCPKEFSRKDHLTNHIRQHTGETPFKCEYCPKCFTRKDHLTNHTRQHTGETPFKCQYCPKAFSRKDHLTDHTRQHTGETPFKCAYCGKEFSRKDHLTNHTRTHTGEQPFKCDFCPKAFGRKDHLTEHVRHHTGESPHKCQYCTKSFTRKEHLTNHVRQHTGESPHRCHFCAKTFTRKEHLNNHVRIHTGDSPHKCEFCQKSFTRKEHLTNHLRQHSGETPHCCNVCSKPFTRKEHLINHMRCHTGERPFVCGECGKSFPLKGNLLFHQRSHNKGAAADRPFRCDLCPKDFTCKGHLVSHRRAHTGERPHSCPDCGKTFVEKGNLLRHVRKHQESVIGHIQGSASGASGVMPPPSAPPPLPVLSSITTYTTQILHPTVVVPTPNPALTSY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01251228;
90% Identity: iTF_01251228;
80% Identity: -