Ppem008377.1
Basic Information
- Insect
- Polypedilum pembai
- Gene Symbol
- lrrfip2
- Assembly
- GCA_014622435.1
- Location
- JACWBX010002167.1:30134-32102[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8.1e-108 7e-104 347.3 39.8 1 299 1 288 1 289 0.92 2 2 0.071 6.2e+02 -0.6 4.1 216 245 314 342 292 363 0.50
Sequence Information
- Coding Sequence
- GCTGAAGCACGATTGGCAGCAAAACGACAAGCAAGAGCAGAGGCGCGTGAAATTCGTATGAGAGAACTGGATCGACAGCAGAAAGAACTGGAACAAAATGCAGATAGAGCCTACGACATGCAGCAGTCGGAGGCGTTGTCGACGCCACGTTCACGATTGACAGTCAATAATAATCATTTGAGCTCTCGAGGAAATTCAATGACGCCGTCATCAAGACGAAGCAGTGAAGATTCATTAGAAGAAGAAGGCAGAAGTTTGAGAGATCTCAGGCATGAGTTAAAGGACGCAGAAGAGCGTTTCCGAAAAGCAATGATAACAAACGCCCAACTCGACAATGAACGTTCCTCACAAGCATATCAAATAGACTTACTTAAAGATAAGTTAGAAGAAATGGAAGAAACATATGCACAATTACAGCGTGAGCATAGAGAAAAGACACGAGCGCATGATGCGTTGAAGAGACAAAATGCAAAACTCGCAGAGGAACTGAAACTCGTTCAAGGACAATTAAATGAGCGCGATACGCTGATAGCCGATTATGGTTTAGTTATTATAGTTGTGGAGAATGAAGATGGCACTGATGCCAAACGTGTTCTAGTCTCAAATGAAAATGCTCAGCTTTTGAATACAACAGAGGGATCAATAGATGTACGACTCAAAAAGTTTACAGAGGAGAAACAGGAACTTCAAAATGAAGTTCAAAAATTGCAACAGCAGCTTAATGACATTAAAACACGTGGACGTCGATCAAGTTCCATCAATGGAGTTGTGGATGATGACGACTATGAAGATGCTCAACGTGAAGCAAATAAAACTATAAATGACTATAAATATCGACTGCAAAAAGCTGAACAAGAAATTGCAAGTCTTCAGGCAAGCTTAGCACGTTCAGAGACTCAGGTTATTCGTTATAAGAGTACAGCGGAAGCAGCTGAAAAAGCCGAAGCAGAGCTGAAAGTTGAAAGGAGGAAATTGCAGCGAGAGAATCGTGAAGCAATGGAGAGACTTGAGGAGCTTGAAACATCAAATAATCATCTACTGAAGCGATTGGATAAATTAAAGAATGCCAAAAGTGCTCTACTCAAAGATCTATGA
- Protein Sequence
- AEARLAAKRQARAEAREIRMRELDRQQKELEQNADRAYDMQQSEALSTPRSRLTVNNNHLSSRGNSMTPSSRRSSEDSLEEEGRSLRDLRHELKDAEERFRKAMITNAQLDNERSSQAYQIDLLKDKLEEMEETYAQLQREHREKTRAHDALKRQNAKLAEELKLVQGQLNERDTLIADYGLVIIVVENEDGTDAKRVLVSNENAQLLNTTEGSIDVRLKKFTEEKQELQNEVQKLQQQLNDIKTRGRRSSSINGVVDDDDYEDAQREANKTINDYKYRLQKAEQEIASLQASLARSETQVIRYKSTAEAAEKAEAELKVERRKLQRENREAMERLEELETSNNHLLKRLDKLKNAKSALLKDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00346731;
- 90% Identity
- -
- 80% Identity
- -