Ppem015056.1
Basic Information
- Insect
- Polypedilum pembai
- Gene Symbol
- sip1
- Assembly
- GCA_014622435.1
- Location
- JACWBX010002369.1:2511-4993[+]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.3e-61 6.3e-57 193.2 13.9 2 275 392 635 391 635 0.94 2 2 0.41 3.6e+03 -2.8 0.0 245 269 650 674 644 678 0.69
Sequence Information
- Coding Sequence
- ATGGCAGAAGAATATGAAAGATTTGAAATCACTGACTACGATCTTGATAATGAATTCAATCCAAATAGAAATAGAAGAAAAATGACAAAAAATCAACAAATTTATGGTGTTTGGGCTGATGATAGTGAAGATGACGGCGAGGAAGCTGAGTTAAAGCCATCAAATAAAGGAGGTCGCAAAGGAGGAATCAAAGACTATACTGCACCAGTTAGTTTTGTATCTGGAGGTGTTCAGCAAGCAGGCAAGAAAAAAGAGAATGATTCGAAGAATAAAAACAAAAAGAAAGAAGACGACGATGATGAGAGTGATCAAGAAATGTCTCATAAAGGAATTGGTTTTGGTAAAAGTAAAGATTCGAGTGAGTCGGAAGAAGAAATTCGACCAACATTTTCACAAACAGCTGGAATGCGTCAGACTACAGGATCATTATCGAATAAAGGTCTAGGTCACTGGGAGCAACACACAAAAGGCATTGGTGCAAAACTTTTGCTTCAAATGGGATATCAACCTGGAAAAGGTTTGGGAAAAGATCTTCAAGGAATATCAGCACCAGTTGAAGCTCATGTGAGAAAAGGAAGAGGTGCTATTGGTGCATATGGACCTGAAAAAAAGACGAAAATCCCAGAATTAAAACAATTGGGAAAGAATCAAATAGATGAAAAGGATCGAGAGAAAACTGATGACAAAAAACAGTGGACAAAGAAAGGTCACAAGAAAAGAAATTTTTATAAGAGTGTAGAGGATGTCATAGAGAAAGCGAAAAAACCCGACTACATGTTATATGATTCAAGTAATAAATTAAGTAAAGTGACAGTAATTGATATGACTGGACCTGAAAAGCGAGTACTAAGCGGATATCATGCACTAGGTCAAATTAGAGGAACAGATGATGATAAGTACGTTGAGTTGAAACAAAAATCTTCATCTGAATTGAAGAATTTTCAATTGCCAGAGCTCATGCATAATTTAAATCTGATAGTCAACATGTGTGAACAAGATATTATTGCAAATGAAAATCGAAAGACTAATGCAGATACTCGACAGAGAACATTGCAGAGTGAGAAAGAACATTTGGAAAAAATTGTCAAATTAGAAAAACAATATATAGAGACGCTTGAAGATGTTGAAGAACTCGTTGAACAATTGGTTGATACTGATAATCCACTGACATTAGAAGAGGGAGAGAAAATTTTTATAAAATTGAAAGTTGACTTCCCTAATGAATTCAAAGAATTTTCACTGTATGATTTAGCACCTGGTGTCATTGCTCCATTGATTAGTTACGCAATTAAAGATTGGAATCCATTACAAGAACCAACAAAACATATCAATATTATTAAAAAATGGGCAGATCTACTTGAATTTTCAAAATCATCTGCAACAACGCTTTTCGATCCATATCCTGCACTCGTTTGGTCTTGCATTATTCCATACTTTCGTAAAGCAGCAAATGAAGATTGGAATCCAAAAAATATACTCAAATGGCTTCTTTACTTGATGCATGTGACTGTCAGTGAATGGGATCCTTTAACAGATATTGTTCCAATTCACACTTGGATTCTACCATGGTCGACTATTTTGGGTCACAAAATGCACGAAAACGTTTACAAGACGATTTGTGATAAACTAAGTAAAGCTTTTAGAGCATGGCATCCTCAAGATCGATCAGCATTAGCAATGATAAAACCATGGAAGAATATCTTTCGTGATGAAGATTTACAAATGTTTCTTCATAAAAATGTCGTACCAAAACTTGAGCTTCGCATGAATGAAATCGTTTTCAATCCTTTGCAACAAGACTTGGAAATTTTCAATCAAATATGGGAGTGGAATGAACTTCTTACTGCGCTTGTTATGGCGAATATTCTAGATAAATACTTTTTTCCTAAGTGGATGCAAACTCTTTTACTATGGCTCAATCAATCGCCGAATTTTGATGAAGTGACAAGATGGTATAGCGGTTGGAAAAATTTATTAAGTGAACCTGTGCTGAAACAAACAAATATCAATGAGCATTTTAGAAGAGCTTTAGAGTTGATGCAACGTGCTGCTGGAATCACAGTACCAATTCCAGAACCTACAATCAACATTCAACCACCATCGCTTCTCGATCTCAATATTAGACCACCTTCAATGAATTTAGATTTTAAGGAAATCGTGTCACAACAGTGTGCTGAAAGAGGAATTATTTTTGCACCAATGCCTGGGAGACGAGAAAATGGTAAACAAGTGTATAGAATTGGAAAACTTTTTTGTTATTTTGATAAATCAGTATGTTGTGTTACTGCTGATCCTGGCAGTTCTAGTTGGATGCCTATGTCACTAAATATTATTTTAGAAAAAGCCAAGTAA
- Protein Sequence
- MAEEYERFEITDYDLDNEFNPNRNRRKMTKNQQIYGVWADDSEDDGEEAELKPSNKGGRKGGIKDYTAPVSFVSGGVQQAGKKKENDSKNKNKKKEDDDDESDQEMSHKGIGFGKSKDSSESEEEIRPTFSQTAGMRQTTGSLSNKGLGHWEQHTKGIGAKLLLQMGYQPGKGLGKDLQGISAPVEAHVRKGRGAIGAYGPEKKTKIPELKQLGKNQIDEKDREKTDDKKQWTKKGHKKRNFYKSVEDVIEKAKKPDYMLYDSSNKLSKVTVIDMTGPEKRVLSGYHALGQIRGTDDDKYVELKQKSSSELKNFQLPELMHNLNLIVNMCEQDIIANENRKTNADTRQRTLQSEKEHLEKIVKLEKQYIETLEDVEELVEQLVDTDNPLTLEEGEKIFIKLKVDFPNEFKEFSLYDLAPGVIAPLISYAIKDWNPLQEPTKHINIIKKWADLLEFSKSSATTLFDPYPALVWSCIIPYFRKAANEDWNPKNILKWLLYLMHVTVSEWDPLTDIVPIHTWILPWSTILGHKMHENVYKTICDKLSKAFRAWHPQDRSALAMIKPWKNIFRDEDLQMFLHKNVVPKLELRMNEIVFNPLQQDLEIFNQIWEWNELLTALVMANILDKYFFPKWMQTLLLWLNQSPNFDEVTRWYSGWKNLLSEPVLKQTNINEHFRRALELMQRAAGITVPIPEPTINIQPPSLLDLNIRPPSMNLDFKEIVSQQCAERGIIFAPMPGRRENGKQVYRIGKLFCYFDKSVCCVTADPGSSSWMPMSLNIILEKAK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01250081;
- 90% Identity
- -
- 80% Identity
- -