Basic Information

Insect: Polyommatus iphigenia
Gene Symbol: -
Assembly: GCA_963422495.1
Location: OY730181.1:7516289-7554893[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 9.7e-05 0.0092 17.4 1.5 1 23 411 433 411 433 0.96

2 20 0.002 0.19 13.3 2.1 1 20 439 458 439 461 0.94

3 20 2.4e-05 0.0022 19.3 5.6 1 23 481 503 481 503 0.98

4 20 0.00021 0.02 16.3 4.7 1 23 509 531 509 531 0.99

5 20 4e-05 0.0038 18.6 5.3 1 23 537 559 537 559 0.97

6 20 1.3e-05 0.0012 20.2 7.3 1 23 565 587 565 587 0.97

7 20 8.1e-07 7.7e-05 23.9 2.9 1 23 593 615 593 615 0.97

8 20 0.00011 0.011 17.2 6.7 1 23 621 643 621 643 0.97

9 20 5.1e-05 0.0048 18.3 5.4 1 23 649 671 649 671 0.98

10 20 5.5e-07 5.2e-05 24.5 1.9 1 23 677 699 677 699 0.98

11 20 5.6e-05 0.0053 18.1 7.9 1 23 705 727 705 727 0.98

12 20 1.3e-05 0.0012 20.1 7.3 1 23 733 755 733 755 0.98

13 20 4.6e-06 0.00044 21.5 4.5 1 23 761 783 761 783 0.98

14 20 1.1e-06 0.0001 23.6 4.2 1 23 789 811 789 811 0.98

15 20 2.6e-05 0.0025 19.2 7.3 1 23 817 839 817 839 0.97

16 20 4.1e-07 3.9e-05 24.9 4.7 1 23 845 867 845 867 0.98

17 20 1e-05 0.00095 20.5 8.0 1 23 873 895 873 895 0.97

18 20 8.8e-07 8.3e-05 23.8 1.5 1 23 901 923 901 923 0.97

19 20 0.00082 0.078 14.5 0.3 1 23 930 952 930 952 0.96

20 20 0.00069 0.065 14.7 2.3 1 23 960 982 960 982 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	9.7e-05	0.0092	17.4	1.5	1	23	411	433	411	433	0.96
2	20	0.002	0.19	13.3	2.1	1	20	439	458	439	461	0.94
3	20	2.4e-05	0.0022	19.3	5.6	1	23	481	503	481	503	0.98
4	20	0.00021	0.02	16.3	4.7	1	23	509	531	509	531	0.99
5	20	4e-05	0.0038	18.6	5.3	1	23	537	559	537	559	0.97
6	20	1.3e-05	0.0012	20.2	7.3	1	23	565	587	565	587	0.97
7	20	8.1e-07	7.7e-05	23.9	2.9	1	23	593	615	593	615	0.97
8	20	0.00011	0.011	17.2	6.7	1	23	621	643	621	643	0.97
9	20	5.1e-05	0.0048	18.3	5.4	1	23	649	671	649	671	0.98
10	20	5.5e-07	5.2e-05	24.5	1.9	1	23	677	699	677	699	0.98
11	20	5.6e-05	0.0053	18.1	7.9	1	23	705	727	705	727	0.98
12	20	1.3e-05	0.0012	20.1	7.3	1	23	733	755	733	755	0.98
13	20	4.6e-06	0.00044	21.5	4.5	1	23	761	783	761	783	0.98
14	20	1.1e-06	0.0001	23.6	4.2	1	23	789	811	789	811	0.98
15	20	2.6e-05	0.0025	19.2	7.3	1	23	817	839	817	839	0.97
16	20	4.1e-07	3.9e-05	24.9	4.7	1	23	845	867	845	867	0.98
17	20	1e-05	0.00095	20.5	8.0	1	23	873	895	873	895	0.97
18	20	8.8e-07	8.3e-05	23.8	1.5	1	23	901	923	901	923	0.97
19	20	0.00082	0.078	14.5	0.3	1	23	930	952	930	952	0.96
20	20	0.00069	0.065	14.7	2.3	1	23	960	982	960	982	0.99

Sequence Information

Coding Sequence: ATGAATGCggatcatcataatattaacacGGGTGGTGGCCAACCCCCTGGCAATTCGGAGGCTCAGAGTCAGAGAGTCCCATCCTCCCAGCAGCAGCAGTCAAATAGTCTCCCTCCCACCACATCTGCTACTGATTTACGAGTAAACTCCGCTGCAGTCAACGTTGCCTTGTCGAGCGTCGCTAAATACTGGGTGTTCACGAATTTATTTCCTGGACCCATACCACAAGTGTCTGTATACGGCCTGCCTACAAGCGCCAGACTGGAGAATGGAAAACCTGTCCAGGATCTCGGTCAAGCCCATCAAAGTATACTGAATGGTGATCCGAATATAATTCTGGGTCACCATGGAGGGCAGCAGCCGGTAGCTGTCTCGGCGTCTGGACAACAAATACCTGTATCACAAATAATTGCATCACAGGCAGGACAAGATCCCCTGGCTCACTCACAGTCGGAACTCGGGTCTCAGCAGTCGTCTTCGTCCAGCGCACAGGTCACAGCTGGGGGCTCCCAAACCTCGCACCAGGTACCCAATAACCGGGTGGAGTTTGTACAACACCATAACATTGATATGGGACATCATTCTCAGCTTCTACAGCAACAGCTGATGGCTGCTTCTCGGCAAGAGCACGCAAATCAGCAGATCCAACTCACGGTGAGCGAGGATGGCATAGTGACGGTTGTGGAGCCGGGCGGCGGTAACAAGTTGGTGGACAAGGATGAGCTACACGAGACCATCAAGATGCCGACAGACCACGCGCTCACCGTGCACCAGCTGCAGCAGATTGTGGGGCATCATCAGGTTATCGACAGTGTAGTACGTATAGACCAAGGTACTGGTGACCCAGCAAATGTAATTGTGACACAGAATCCCGACGGCACCACCTCCATCGAGACGAGTTCCGGTGAACTCAGCCTAGCGCAGGTGAAAGATGAGAAGACAACCATCGCGATACCGGCTGAGATCAAGGATATCAAGGGAATTGACTTGAAGAATGTCGGCGCTATGGGTATGGAGGGTACAGTAGTGAAAATATCTACGGGCTCAGATCAAGATCTACACACCATGTACAAAGTGAATGTGGAGGATCTATCACAGCTGTTGGCCTACCACGAGGTGTTTGGTAAACTCAACACGGAGGCCGCACCGCAGGCTAAGGTCATAGCCGAAGTTGAGGTGATACCAGGGACCAGCGGAGCGCTGGCAGAGTCGGAGACCTCGCCAGGCCATCACGCCTGTGATATATGCGGGAAAATATTCCAGTTCAGATACCAGCTCATTGTTCATAGGCGATATCACGGAGAAACCAAACCTTTTACATGTCACGTCTGCGGCTCGACCTTCGCGAATCCTGTTGAACTGTCAAGACACGGGAAATGTCATCTGgCCGCGGGAGATCCAGCCGAGCGTCAGGCGAAGAGGTTGGCGCAGGACAAGCCGTACGCGTGCACAACCTGCCACAAGACCTTCTCGCGGAAGGAGCATCTCGACAACCATGTGCGGAGTCACACCGGAGAAACCCCCTATAGATGTCAGTTTTGCGCCAAGACGTTCACGCGTAAGGAGCACATGGTGAACCACGTCCGCAAACACACGGGCGAGACGCCGCACCGATGTGAGATATGCAAGAAAAGCTTCACGAGAAAGGAGCACTTCATGAACCACGTTATGTGGCATACTGGTGAAACGCCGCACCATTGTCAAATATGCGGCAAGAAGTATACTAGGAAGGAGCACTTAGTGAACCATATGAGATCCCATACGAACGACACTCCGTTCAGGTGTGAACTGTGCGGCAAGTCCTTCACCCGCAAGGAACATTTCACCAACCACATACTGTGGCACACCGGTGAGACTCCGCACCGCTGCGACTTCTGTTCCAAAACGTTCACGCGGAAGGAGCATCTGCTAAACCACGTCCGACAGCATACGGGCGAATCGCCCCATCGCTGCAACTACTGCGCCAAGAGCTTCACGCGACGGGAACACCTCGTGAACCACGTCAGACAGCACACGGGGGAAACACCGTTCCAGTGCGGATACTGTCCGAAGGCTTTCACCCGGAAAGATCATTTAGTGAACCACGTCAGACAGCATACGGGCGAATCTCCCCACAAGTGTTCCTTCTGCACCAAGTCGTTCACTCGCAAGGAGCACCTGACCAATCACGTGCGGCAGCACACGGGGGAATCCCCGCACCGCTGCTCATACTGCAGCAAGAGCTTCACGCGCAAGGAACACCTCAATAACCACGTCAGACAGCACACCGGGGAGACTCCTCACAAGTGCACGTACTGCCCGCGCGGGTTCGCGCGCAAGGAGCACCTCACCAACCACATTCGCCAGCACACGGGAGACGTGCCCTACTCGTGCTCCTACTGCAGCAAGAGCTTCACGCGGAAAGAGCACCTGGTCAATCATATCCGACAACATACCGGCGAAACCCCATTCAAGTGCACGTACTGCACAAAGTCGTTCTCGCGTAAGGAGCACCTGACGAACCACGTCCACCTTCACACCGGCGAGACGCCGCACAAGTGTCCGATCTGTACGAAAACATTCTCCAGGAAAGAGCACCTTACCAATCACGTCAGAATACATACGGGCGAGTCGCCGCATCGATGTGAGTTCTGCAACAAGACTTTCACGAGGAAGGAGCATCTGACGAACCATATGAAACAACATTCTGGTGATTCAGTGCATCCCTGCAAGATATGCTCCAAACCATTCTCGAGAAAAGAATTGCTGGCTACGCATATGAGATCGCACAGCTGCGGCGAGCGGCCGTTCAGTTGCGGGGAGTGCGGCAAGTCGTTCCCGCTGAAGGGCAACCTGCTCTTCCACGAGCGGTCGCACAACAAGGGCGGCGGCTCCAAGTTCCGCTGCGACGTGTGCTCCAAGGACTTCATTTGTAAAGCCAATCTTATGGCGCACCGGCGCACGCACGTGGAGTCCGGGGAGGCGGCGGCCGAGGATTGCGGCGACTGCGACAAGGAGGAGCCGGTAGAGAGGAAACACAATATACGAGAACCGTCTGAGGGTAGATCAACGGAGAGTGTTGTTCAAAGCCAACAGAATACGTCCACAGTCATGCAACAGATCACAAATCAGCCACAAGTCCGAGCACCCACGACCGGTTCGACCGTCAGCGCGGGCAGCTTCGGCCACGCGACCGGCCATCACTCCGGCGCCGCCATCGCCCATCACACAGTCACGGTCAACTACTAG
Protein Sequence: MNADHHNINTGGGQPPGNSEAQSQRVPSSQQQQSNSLPPTTSATDLRVNSAAVNVALSSVAKYWVFTNLFPGPIPQVSVYGLPTSARLENGKPVQDLGQAHQSILNGDPNIILGHHGGQQPVAVSASGQQIPVSQIIASQAGQDPLAHSQSELGSQQSSSSSAQVTAGGSQTSHQVPNNRVEFVQHHNIDMGHHSQLLQQQLMAASRQEHANQQIQLTVSEDGIVTVVEPGGGNKLVDKDELHETIKMPTDHALTVHQLQQIVGHHQVIDSVVRIDQGTGDPANVIVTQNPDGTTSIETSSGELSLAQVKDEKTTIAIPAEIKDIKGIDLKNVGAMGMEGTVVKISTGSDQDLHTMYKVNVEDLSQLLAYHEVFGKLNTEAAPQAKVIAEVEVIPGTSGALAESETSPGHHACDICGKIFQFRYQLIVHRRYHGETKPFTCHVCGSTFANPVELSRHGKCHLAAGDPAERQAKRLAQDKPYACTTCHKTFSRKEHLDNHVRSHTGETPYRCQFCAKTFTRKEHMVNHVRKHTGETPHRCEICKKSFTRKEHFMNHVMWHTGETPHHCQICGKKYTRKEHLVNHMRSHTNDTPFRCELCGKSFTRKEHFTNHILWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCNYCAKSFTRREHLVNHVRQHTGETPFQCGYCPKAFTRKDHLVNHVRQHTGESPHKCSFCTKSFTRKEHLTNHVRQHTGESPHRCSYCSKSFTRKEHLNNHVRQHTGETPHKCTYCPRGFARKEHLTNHIRQHTGDVPYSCSYCSKSFTRKEHLVNHIRQHTGETPFKCTYCTKSFSRKEHLTNHVHLHTGETPHKCPICTKTFSRKEHLTNHVRIHTGESPHRCEFCNKTFTRKEHLTNHMKQHSGDSVHPCKICSKPFSRKELLATHMRSHSCGERPFSCGECGKSFPLKGNLLFHERSHNKGGGSKFRCDVCSKDFICKANLMAHRRTHVESGEAAAEDCGDCDKEEPVERKHNIREPSEGRSTESVVQSQQNTSTVMQQITNQPQVRAPTTGSTVSAGSFGHATGHHSGAAIAHHTVTVNY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00925938;
90% Identity: iTF_00744950;
80% Identity: -