Basic Information

Insect: Polymixis flavicincta
Gene Symbol: ZFY
Assembly: GCA_949987655.1
Location: OX465196.1:3402197-3427621[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.072 9.1 8.4 1.1 1 23 99 121 99 121 0.97

2 12 0.25 31 6.7 4.1 1 23 128 150 128 150 0.97

3 12 0.8 1e+02 5.1 1.1 1 15 154 168 154 177 0.82

4 12 5.3e-06 0.00067 21.4 3.6 1 23 182 204 182 205 0.95

5 12 0.0018 0.22 13.4 0.9 2 23 212 233 211 233 0.97

6 12 1.2e-05 0.0015 20.3 0.7 2 23 247 268 246 268 0.97

7 12 1.3 1.7e+02 4.4 4.7 3 23 274 295 272 295 0.95

8 12 4.4e-05 0.0056 18.5 3.8 2 23 306 328 305 328 0.97

9 12 0.11 14 7.8 0.8 1 23 335 358 335 358 0.93

10 12 0.0037 0.47 12.4 0.4 5 23 370 389 368 389 0.93

11 12 0.00014 0.018 16.9 4.6 1 23 398 420 398 420 0.98

12 12 0.00073 0.092 14.6 0.4 1 23 425 448 425 448 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.072	9.1	8.4	1.1	1	23	99	121	99	121	0.97
2	12	0.25	31	6.7	4.1	1	23	128	150	128	150	0.97
3	12	0.8	1e+02	5.1	1.1	1	15	154	168	154	177	0.82
4	12	5.3e-06	0.00067	21.4	3.6	1	23	182	204	182	205	0.95
5	12	0.0018	0.22	13.4	0.9	2	23	212	233	211	233	0.97
6	12	1.2e-05	0.0015	20.3	0.7	2	23	247	268	246	268	0.97
7	12	1.3	1.7e+02	4.4	4.7	3	23	274	295	272	295	0.95
8	12	4.4e-05	0.0056	18.5	3.8	2	23	306	328	305	328	0.97
9	12	0.11	14	7.8	0.8	1	23	335	358	335	358	0.93
10	12	0.0037	0.47	12.4	0.4	5	23	370	389	368	389	0.93
11	12	0.00014	0.018	16.9	4.6	1	23	398	420	398	420	0.98
12	12	0.00073	0.092	14.6	0.4	1	23	425	448	425	448	0.97

Sequence Information

Coding Sequence: ATGCTGCAGTGCGAAAAAGAAACCAAAGATCTGAAATCAAGATTGCCGCCGAAGAAGAGATTAGAGAAGCGAGTCAAGCTAGAAGATGACGACGACTTCACAAAACAAGAAAAGCCGGAGAAAAAGAATATTACTGATGAAAATGAAGAGCAAGTGGAAAATTCTCAACCTAAGACGGAAACCCCCTTGATGTACTCCTATGAAGTATTAAGGAACATAGAAATTGTGACCATTGACGAAGAAGAACGTCAGAAAGAGTATAAAGAGACGTTGAAGTCGCGTCAACACATGCGTCATGTGTGTGAACACTGCGCGCTTGGCTTCGTACTCAAACAGGCGTTTGATATGCATATGAAGGTTCATTCTCCCCAATCAGGCGACCACGAGTGCTTACTCTGCCACTCCCGTCTCAAAACCGCTGACATGTTATACCGTCACCGCTTACGGCATTACCGCCGCTACCGGTGCCTGCTTTGCCGGATGCGGTTTAAAGATAAAGACACTGCCGCATGTCATGTCATGAACGATCACGCTGGACAGACCTTCGAGTGTGACCATTGTGGGAGAGGATTTAAACGACCGCAGTACCTAAAGCGGCACGTGGAACAGCACCACACCAAGCCCCACAATCTTGAATGTGGCGTCTGCTTCCGAGTCTTCCACGAGAGGGGCTGGTATAGATCTCATATCAGGACTCATAACGAGGAGGTACGTGCCAAGACGGTGCGGCTGCCAGTCACCTGCGAGATCTGCTCTCGCGACTACAAGAACAAAGCAAGCCTGAAGCGTCACCTGCTCACCCACGACGAGAACGTCCATTGTGAGATATGCTACGAGAAGTGCAAGAATCGAATCACGTTGGGACATCACTATTTGAAAGTGCATAATGAGAAGTATGTTGGTGCACCAGAGCAGACTTGCCCGCACTGCGACCGGATCTGCGTGACGCGCGCGATGCTCAAGCGGCACATGCAAAGGATGCACAGTGATAGAACTAAGAAATACCAATGCGATCACTGCCAGCGTCTCTACCTCACTAAAGGCGAGGTCCGGGCCCACATCACCTGGTCGCACATGCCGGCCGAGGCCCGAGGAGGGCACGCCTGCACGTGTGGTCGCATCTTCAGGAGCCCCTCGCTGCTTCGCGACCATAAAGCCAGGTTCCATGCGTCGCAGCCACCACCGAGGGTTCACCAGTGTGAACACTGTGAAAAGGCTTTTGCGaACAAACAAGTGCTGAATCGTCACAAGAAAAGCCACTCCAACGAGATGTATCCCTGCAAGGAATGTGGACTGCTGTTCAAAACTCAACCTTATGTCAAGGTCCACTACCAAATCAAACACTTGAACATGACAAGAGCACAAATCAAAGCACAGAGGAAGCTCAACAAAGAGCAGCTAATACAGAATAATATACATAGAAGTACTAATTGGGAACCACCCATCTCCAACAAGAAGAAAAGTGCTGTTGCAATTGAAAATGAAGAAGACCCACTCTTGGTTGAAGAGGGGGAAGTGCAAATCAAATTGGAGAAAGAAGACGAACTTCAAATTCCAACTTTCCAAACTTTTGTTGATATTAGTAGGGAATGA
Protein Sequence: MLQCEKETKDLKSRLPPKKRLEKRVKLEDDDDFTKQEKPEKKNITDENEEQVENSQPKTETPLMYSYEVLRNIEIVTIDEEERQKEYKETLKSRQHMRHVCEHCALGFVLKQAFDMHMKVHSPQSGDHECLLCHSRLKTADMLYRHRLRHYRRYRCLLCRMRFKDKDTAACHVMNDHAGQTFECDHCGRGFKRPQYLKRHVEQHHTKPHNLECGVCFRVFHERGWYRSHIRTHNEEVRAKTVRLPVTCEICSRDYKNKASLKRHLLTHDENVHCEICYEKCKNRITLGHHYLKVHNEKYVGAPEQTCPHCDRICVTRAMLKRHMQRMHSDRTKKYQCDHCQRLYLTKGEVRAHITWSHMPAEARGGHACTCGRIFRSPSLLRDHKARFHASQPPPRVHQCEHCEKAFANKQVLNRHKKSHSNEMYPCKECGLLFKTQPYVKVHYQIKHLNMTRAQIKAQRKLNKEQLIQNNIHRSTNWEPPISNKKKSAVAIENEEDPLLVEEGEVQIKLEKEDELQIPTFQTFVDISRE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01441398;
90% Identity: iTF_00449573;
80% Identity: -