Pmex019695.1
Basic Information
- Insect
- Polyergus mexicanus
- Gene Symbol
- Lrrfip2
- Assembly
- GCA_030449975.1
- Location
- JAUDSZ010000010.1:8370994-8373910[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 2.1e-117 9.8e-113 377.7 35.1 1 300 29 328 29 328 0.98 2 3 0.0039 1.8e+02 2.5 3.6 122 171 328 377 326 380 0.92 3 3 0.046 2.1e+03 -1.0 6.4 195 238 360 402 345 403 0.51
Sequence Information
- Coding Sequence
- ATGGAATCTGCTATAACTGGGCGAAGGAGGAATGCCACACGGCATTCTGCAGAAGATCAAGCGCTCGATCAAATAGCTAAGGAGGCAGAAGCGAGACTTGCTGCTAGAAGACAGGCAAGAGCGGAAGCTAGAGAAATACGAATGCGTGAATTAGAGAGACAACAAAAAGAGGCAGAGGAGAATGCTGACAGGGTTTATGACATGTGTACAGCTGATGTGAACAGAACTATGAGAGTAACCCCAGATCCAGTACGTACGTCACGGCTTCTTACAAATTCCAACAATTTCCAATCAAGTCGCAGATCTTCAGAAGATTCACTAGAAGATGCAGGATTAAGTAGAGATATTAGGCtggaattaaaagaatttgaagaaaaattcaGGAAGGCAATGATAGCTAATGCTCAATTAGACAACGAAAAATCATCTTATGTCTATCAAgttgatttattaaaagacAAATTAGAAGAGTTAGAGGAAACAACTGTTCAATTACGTAGAGAATTGAGGGAAAAGAATCGAGATGTTGAACAATTAAAACGAGTTAatcagaaattaaaagaaGATTTAGGTATTTGCAGGGCACAATTACTAGAAAGAGATACACTCATACAAgaaAATGGCTTAATTATCATTGACAATGAAGAAAGCGAAGATgaagataatgaaaatattgaaaataggCCATATTGTAGAAAGAGGGTACTAGTCAGTACAGAAGCTGCAGAATTATTGGAAACAGCTGGTAAAGGTTCACTGGATGTCCGATTAAGAAAATTTGCTTTTGAAAAAAAGGAATTGCAAGATGAAATTCGACATTTAAGATTGGAATTGGAAGAAACTAGAAGTCGTATGAGATCCGAAAGATCATCTGGCTCAGTATTAGGTTGTTTGTCAGAAAACGAAGATATTCAGCGTGAGGCAAATAAATTGTTAGcagattataaatttaaattacagaAAGCAGAACAAGACATGTCTACGCTACAAGCAACAGTAGCTAGATTGGAAAGTCAAGTAATTCGTTACAAATCAGCTGCAGAAGCATCTGAAAAAGCAGAAGATGAATTAAAagtggaaaaaagaaaattacaaagaGAAgtAAGAGAAACGCAAGCTCGTGTAGAAGAATTGGAGACAGCAAACTCTCATCTGCAAAGGCGATTGGATAAacttaaaaatgcaaaatcgGCACTTTTAAAGGAGCTTTGA
- Protein Sequence
- MESAITGRRRNATRHSAEDQALDQIAKEAEARLAARRQARAEAREIRMRELERQQKEAEENADRVYDMCTADVNRTMRVTPDPVRTSRLLTNSNNFQSSRRSSEDSLEDAGLSRDIRLELKEFEEKFRKAMIANAQLDNEKSSYVYQVDLLKDKLEELEETTVQLRRELREKNRDVEQLKRVNQKLKEDLGICRAQLLERDTLIQENGLIIIDNEESEDEDNENIENRPYCRKRVLVSTEAAELLETAGKGSLDVRLRKFAFEKKELQDEIRHLRLELEETRSRMRSERSSGSVLGCLSENEDIQREANKLLADYKFKLQKAEQDMSTLQATVARLESQVIRYKSAAEASEKAEDELKVEKRKLQREVRETQARVEELETANSHLQRRLDKLKNAKSALLKEL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00305050;
- 90% Identity
- iTF_01266881;
- 80% Identity
- -