Pter003430.1
Basic Information
- Insect
- Polydrusus tereticollis
- Gene Symbol
- -
- Assembly
- GCA_963920685.1
- Location
- OY987326.1:37424738-37426433[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 5.2e-08 4e-06 29.4 0.0 2 39 19 56 18 61 0.90
Sequence Information
- Coding Sequence
- ATGGTGCGTCACTCCCAGAAAAAAGTGGGTGGCCGCACTTATAGGAACTACACTGATGCAACTATTGAAgaagcattaaaaaaaattgttgatgaACAATGGTCAATTCGCAGAGCTGCAGACACGTACAAAATATCATTTGGCACTTTATACAATAGATACAATGGCCTTCATATAAGTAAAGCGGATATTCAAGCACTTGCAAAATCATGCTTAGATCAGAAGGGTGCAATTATTCCTTGGTTGAAAGAGAACAAACCAGGAATAGACTGGGTCGACCAATTACTCCTACGACACAAATCAGCAGTGGTTAAAAGAGTTGCCGCAAACATCAAAAGGGCCAGAGCAACAGTCAGCGAGACCAGTCTAAAGGAATATTTTAAGAACATTGAAAAAACAATTAAAGGGGTACCACCTGCTAATATTTCCAATTACGACGAGACAAACTTCTCCAATGACCCTGGACGAAGCTTCAAAATTTACCGGCGAGGAGTGAAATATCCGGAGCAGATTTGCAATTATAGCAAGTCAGCAACAACAGTGATGATGTGTGGTTCTGCATCCGGTGTTTTGCTGCCTCCATATATTGTATACAGAGCTGAGAAAATGTGGAACACTTGGATAGAGAATGGTCCCAAAGGCTTTCCTTGCTGCAATCAAAGATGTTGCTCTGCTGGCGCGAGATACAATAGGACACGACATGGATGGATGGAAGCAGTCACATTCCGTGATTGGTTTATGAACAGCTTTCTATCTCATGCGAAAACCTTACAAGGAAAAAAAGTACTCATCGGAGACAATCTAGCTGCACATTTTTCAGACGACGTAATGCATGGCGCTTCTACCCTGAAAAAATGGAAAGACAAAAACCCTCGAATATCATCTTTGCCCAAAGAAGAATTTCCACGGCTTCTTCAAAGTTCGCTGCTAGCAATGGACAATCCTGAATCGGCTAAAGAACCAGGTGCGATATCTCGAGATTTAATAAGTGGATTCGCTGCCACAGGAATCGTTCCTTTTAATCCGGAGAGGGTATTGTGCAAGATACCTGGATTTAAGACAGAAGCACCAACTAAGCAAATCAACGAAAATTTAATAAGCTTTTTGAAACGTCAGAGATTTGATAAAGATGACACTACACCAAACAgacaaaaaaggaaaatgttgAAAGTTGTGCCTGGGGTCAGCGTCCTTCATGTATCGGCCGAGAACGACGAGCTGATAGATCAAGAATCTCGTTCTCCATCTCCGGAAACAACGGAAGAAATTGAGGAAGAGCAGGGTTGTTCTAGCCAGAACCAAGAAATCGAGGACGATTCCACCCAGGACGTGACTGCCAAAGTTGGGGACTTCGTAATTGTCAATATGAGTGTAGAAGGCTCTAACTTATCGAAAAAGTTTGTAGGCTGTGTTACAGAGGTTGATTCTTCGAACGACCTAGTGATTCGCTTCATGAGGGAACGAGTGGgggaaaaaaacaaatttcttcGTGTTCCCTGA
- Protein Sequence
- MVRHSQKKVGGRTYRNYTDATIEEALKKIVDEQWSIRRAADTYKISFGTLYNRYNGLHISKADIQALAKSCLDQKGAIIPWLKENKPGIDWVDQLLLRHKSAVVKRVAANIKRARATVSETSLKEYFKNIEKTIKGVPPANISNYDETNFSNDPGRSFKIYRRGVKYPEQICNYSKSATTVMMCGSASGVLLPPYIVYRAEKMWNTWIENGPKGFPCCNQRCCSAGARYNRTRHGWMEAVTFRDWFMNSFLSHAKTLQGKKVLIGDNLAAHFSDDVMHGASTLKKWKDKNPRISSLPKEEFPRLLQSSLLAMDNPESAKEPGAISRDLISGFAATGIVPFNPERVLCKIPGFKTEAPTKQINENLISFLKRQRFDKDDTTPNRQKRKMLKVVPGVSVLHVSAENDELIDQESRSPSPETTEEIEEEQGCSSQNQEIEDDSTQDVTAKVGDFVIVNMSVEGSNLSKKFVGCVTEVDSSNDLVIRFMRERVGEKNKFLRVP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01242316; iTF_01238721; iTF_01240232; iTF_01240105; iTF_01240233; iTF_01240234; iTF_01240235; iTF_01240238; iTF_01238844; iTF_01238719; iTF_01242815; iTF_01238720; iTF_01240236; iTF_01238714;
- 90% Identity
- -
- 80% Identity
- -