Ppte046642.1
Basic Information
- Insect
- Polydrusus pterygomalis
- Gene Symbol
- -
- Assembly
- GCA_963969555.1
- Location
- OZ018379.1:56654656-56656455[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.3e-09 4.2e-07 31.7 0.0 2 39 19 56 18 59 0.92
Sequence Information
- Coding Sequence
- ATGGTGCGTCACTACCAGAAAAAAGTGGGTGGCCGCACTTATAGGAACTACACTGATGCAACCATTGAAGAAGCATTACAAAAAATTGTTGATGAACAATGGTCAATTCGCAGAGCTGCAGACACGTACAAAATACCATTTGGCACTTTATACAACAGATACAATGGCCTTCATATAAGGTCTGTGGGTCGACCAACCCTTTTTTCTAATGAAGAGGAGCTCCAGTTTATAGAATCTGCTGCTATTTGCGGTGAATGGGGCTTTCCTTTGAGTGAAGCGGATATCCAAGCACTTGCAAAATCATGCTTAGATCAGAAGGGTGAAATTATTTCTTTGTTGAAAGAGAATAAACCAGGAATAGACTGGGTCGACCAATTACTCCTACGACACAAATCAGCAGTGGTTAAAAGAGTTGCCGCAAACATCAAAAGGGCCAGAGCAACAGTCAGCGAGACCAGTCTAAAGgaatattttaagaacattgaaaaaacaattaaagggGTACCACCTGCTAATTGTTTCAATTACGACGAGACAAACTTCTCCAATGACCCTGGACGAAGCTTCAAAATTTACCGGCGAGGAGTGAAATATCCGGAGCAGATTTGCAATTATAGCAAGTCAGCAACAACAGTGATGATGTGTGGTTCTGCATCCGGTGTTTTGCTGCCTCCATATATTGTATACAGAGCTGAGAAAATGTGGAACACTTGGACAGAGAATGGTCCCAAAGGCTTTCCTTGCTGCAATCAAAGATGTTGCTCTGCTGGCGCGAGATACAATAGGACACGACATGGATGGATGGAAGCAGTCACATTCCGTGATTGGTTTATGAACAGCTTTCTACCTCATGCGAAAACCTTACAAGGAAAAAAAGTACTCATCGGAGACAATCTAGCTGCACATTTTTCAGACGACGTGTTGAAAGCATGTGAGCAGAACAACATTGATTTTGTATGCCTTGTGCCAAATTCAACCCATTTGACGCAACCACTCGATGTCTGTTTTTTCCGTCCTATGAAGAATGCATGGCGCTCTACCCTGAAAAAATGGAAAGACAAAAACCCTCGAATATCATCTTTGCCCAAAGAAGAATTTCCACGGCTTCTTCAAAGTTCGCTGCTAGCAATGGACAATCCTGAATCGGCTAAAGAACCAGGTGCGATATCTCGAGATTTAATAAGTGGATTCGCTGCCACAGGAATCGTTCCTTTTAATCCGGAGAGGGTATTGTGCAAGATACCTGGATTTCAGCCAGAAGCACCAACTAAGCAAATCAACGAAAATTTAATAAGCTTTTTGAAACGTCAGAGATTTGACAAAGATGACACTACACCAAACAGACAAAAAAGGAAAATGTTGAAAGTTGTGCCTGGGGTCAGCGTCGTTCATGTATCGGCCGAGAACGACGAGCTGATAGATCAAGAATCTCGTTCTCCATCTCCGGAAACAACGGAAGAAATTGAGGAAGAGCAGGGTTGTTCTAGCCAGAACCAAGAAATCGAGGACAATTCTACCCAGGACGTGACTGCCAAAGTTGGGGACTTCGTAATTGTCAATATGAGTGTAGAAGGCTCTAACTTATCGAAAAAGTTTGTAGGCTGTGTTACAGAGGTTGATTCTTCGAACGACCTAGTGATTCGCTTCATGAGGGAACGAGTGgggaaaaaaacaaatttcttcGTGTTCCCTGATGTGCCAGACGAAAGCATCATCCAAACGACTGAAGTTATTGCTGTAATAAAGCCCTTCTCTTCGAGGAGGGGAtcgtattttttcagaaatatcgATCTTaactaa
- Protein Sequence
- MVRHYQKKVGGRTYRNYTDATIEEALQKIVDEQWSIRRAADTYKIPFGTLYNRYNGLHIRSVGRPTLFSNEEELQFIESAAICGEWGFPLSEADIQALAKSCLDQKGEIISLLKENKPGIDWVDQLLLRHKSAVVKRVAANIKRARATVSETSLKEYFKNIEKTIKGVPPANCFNYDETNFSNDPGRSFKIYRRGVKYPEQICNYSKSATTVMMCGSASGVLLPPYIVYRAEKMWNTWTENGPKGFPCCNQRCCSAGARYNRTRHGWMEAVTFRDWFMNSFLPHAKTLQGKKVLIGDNLAAHFSDDVLKACEQNNIDFVCLVPNSTHLTQPLDVCFFRPMKNAWRSTLKKWKDKNPRISSLPKEEFPRLLQSSLLAMDNPESAKEPGAISRDLISGFAATGIVPFNPERVLCKIPGFQPEAPTKQINENLISFLKRQRFDKDDTTPNRQKRKMLKVVPGVSVVHVSAENDELIDQESRSPSPETTEEIEEEQGCSSQNQEIEDNSTQDVTAKVGDFVIVNMSVEGSNLSKKFVGCVTEVDSSNDLVIRFMRERVGKKTNFFVFPDVPDESIIQTTEVIAVIKPFSSRRGSYFFRNIDLN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01242736;
- 90% Identity
- iTF_01238721;
- 80% Identity
- -