Ppte061197.1
Basic Information
- Insect
- Polydrusus pterygomalis
- Gene Symbol
- -
- Assembly
- GCA_963969555.1
- Location
- OZ018382.1:17106294-17123117[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 5e-09 6.3e-07 31.1 0.0 1 39 299 338 299 342 0.90 2 4 8.7e-12 1.1e-09 40.0 0.1 1 39 353 391 353 394 0.95 3 4 3e-17 3.9e-15 57.4 0.0 1 45 408 453 408 453 0.98 4 4 4.1e-15 5.3e-13 50.6 0.0 1 39 460 499 460 503 0.94
Sequence Information
- Coding Sequence
- ATGTCCCTGCTCCGGACTGCTGACCAACTGAAAATCAAGGGCCTCTGTGAATCCCCGAAGGACGGCACCGTAACGACTACCTCAATCACTCACAAATCACCTCAGTTTTGTAGAAAAACCGACTCAACCCTCAAAAGGACCTCAACGCCCAGTTTTACGTTGCTAGACAATAATCATCGGCAGTACAAATACAGACGCTTAGAAAACGATCAGATAATACTCAAAGAATCCACCTCACCAGAAAGTGGTTTAAACAGGGAAGCAGCAGGAGCATCGCAGGAAAAATCTGATAGTCAGTCCGATACTGACAATGACATGCCTATAGcTCTTGATGAACACAAGAAACGGCAAAAGCAACATCACGGACTCGAACCTGAACAGGACATTCCACTCAACATGAGTAGCCATGGACTCATGGCGGGGCAGGCAATTTTCTCGACATTCGACACCGATGACTTCCCCCCGGAACCAGCCGCCCCCTCGGCCATCCCCGTGGGCCACATGGACATGTCCGATCATACGGCGACGATGCTGACAAACACACCTATCCATCGGACGGACCTATCGGACGCCACGACGAAATACGCAATggaaatcaaaaaagaaaatgaaATAAAATTTGAAACTCTCCGTTCTTTCGACCAAGACAGCCTTCTAGAAATGGACTCTCACCTCAGTGGGGATCATTCCATAAGTTCACACGAAGACCTCGGCGACCTTCATCAAAACATGATGGGCTCAGAATACACGCCTCCCCTACAAAGTGGCATACATAACAGACTAGATATGAGTGACGGGAGTGACAACGGAGATATTTCCAGCGGCAAGACGAACGGACACTCTGGAGATGGACAAAGTGGGCGGGGTCATAGTGGTGGGGGACCCAAGACATGGACGCAAGAGGATATGGATATGGCGCTTGATGCGTTGAAAAATCACAATATGAGTCTTACAAAGGCGTCGGCAAGTTACGGCATTCCCTCCACCACCCTGTGGCAAAGGGCGCATAGATTAGGCATAGACACTCCGAAAAAGGAGGGCCCTACAAAATCGTGGACGGAGGAGAACCTTAATAATGCTTTGGAGGCCTTAAGAACAGGGACTATATCTGCCAATAAGGCCAGTAAAGCATATGggATTCCCAGTAGTACCCTGTACAAAATAGCGAGACGAGAAGGTATAAGACTGGCCGCGCCTTTCAACGCAGCACCAACCACGTGGACGCCGGAAGATTTAGAAAAGGCCTTAGAATCTATTCGAACAGGTCAAACGTCCGTCCAAAAAGCATCCACAGAATTCGGCATTCCAACAGGCACCCTCTACGGAAGGTGCAAGAGAGAGGGAATAGAGCTGTCTCGGTCCAATCCCACGCCTTGGTCGGAGGACGCTATGGGAGAGGCATTGGAGGCAGTCAGGTTAGGTCACATGTCCATTAATCAAGCAGCCATCCACTACAACTTGCCTTACTCATCTCTGTATGGACGATTTAAGAGAGGAATCAAATATGACTCAGATAATATAGAGATACAGCAAGAAAATACTCAACCACAGCAAATGGACGTTCATTCGTTCGGAGGCATAGAATTCAGCAACGGTCAGCAAATTCAATACCAAAATCAACCAAATAGCTGA
- Protein Sequence
- MSLLRTADQLKIKGLCESPKDGTVTTTSITHKSPQFCRKTDSTLKRTSTPSFTLLDNNHRQYKYRRLENDQIILKESTSPESGLNREAAGASQEKSDSQSDTDNDMPIALDEHKKRQKQHHGLEPEQDIPLNMSSHGLMAGQAIFSTFDTDDFPPEPAAPSAIPVGHMDMSDHTATMLTNTPIHRTDLSDATTKYAMEIKKENEIKFETLRSFDQDSLLEMDSHLSGDHSISSHEDLGDLHQNMMGSEYTPPLQSGIHNRLDMSDGSDNGDISSGKTNGHSGDGQSGRGHSGGGPKTWTQEDMDMALDALKNHNMSLTKASASYGIPSTTLWQRAHRLGIDTPKKEGPTKSWTEENLNNALEALRTGTISANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPTTWTPEDLEKALESIRTGQTSVQKASTEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMGEALEAVRLGHMSINQAAIHYNLPYSSLYGRFKRGIKYDSDNIEIQQENTQPQQMDVHSFGGIEFSNGQQIQYQNQPNS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01186924;
- 90% Identity
- iTF_01241730;
- 80% Identity
- -